; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G017590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G017590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:16383655..16384152
RNA-Seq ExpressionLsi01G017590
SyntenyLsi01G017590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025819.1 uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa]2.5e-4376.64Show/hide
Query:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE
        MAEPQTRENLAQNLSLSPLSRSSF   A D DPVD PLSPPAVA        ++DPDLIREPKRRKHCPTALENLDELTSASNSSF FTFDTKFCGFSAE
Subjt:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE

Query:  ITPKFGSFNSITPEIETNRVEEEEKKLESVHKVEEEE
        ITPKFGSFNSI PE+E N+ +EE +      +VEEEE
Subjt:  ITPKFGSFNSITPEIETNRVEEEEKKLESVHKVEEEE

KAG5583307.1 hypothetical protein H5410_053934 [Solanum commersonii]4.7e-1347.57Show/hide
Query:  SPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPEIETNRVEEEEKKLESVHKVEEEE
        SPP  A +      IEDPD++R+PKRRK+CP+AL+  D L S SN  F+F+FD+KF G S  E+TPKFGSFN + P   T   + EE  LE   + ++++
Subjt:  SPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPEIETNRVEEEEKKLESVHKVEEEE

Query:  EEE
        +EE
Subjt:  EEE

KAG6595438.1 hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4567.38Show/hide
Query:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAV-----AAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFC
        MAEPQTRE  AQN SLS LSRSSF   AAD DP D PL+PPAV     AA DSSDV IEDPDL+REPKRRKHCPTALENLDELTSASNSSF FTFDTKFC
Subjt:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAV-----AAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFC

Query:  GFSAEITPKFGSFNSITPEIETN-----------------RVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEEGGGQESVAD
        GFSAEITPKFGSFNSI  E ET                  R +EEE+KL+SV +  E++E+EI V DALLE I E  E  G ESVAD
Subjt:  GFSAEITPKFGSFNSITPEIETN-----------------RVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEEGGGQESVAD

KAG6604296.1 hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4566.14Show/hide
Query:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAV---AAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGF
        MAEPQTREN AQN SLSPLSRSSF  +AAD DP +R L P  +   AA D SDVGIEDPDLIREPKRRKHCP+ALENLDELTSASNSSF FTFDTKFCG 
Subjt:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAV---AAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGF

Query:  SAEITPKFGSFNSITPEIETNRVEEEEKKL---------------ESVHK------VEEEEEEEIGVADALLEEIEEEEEGGGQESVAD
        SAEITPKFGSFNSI  E+E+ + E++E++L               ESV++       EEEEEEE  VADALLE I    EGGG ESVAD
Subjt:  SAEITPKFGSFNSITPEIETNRVEEEEKKL---------------ESVHK------VEEEEEEEIGVADALLEEIEEEEEGGGQESVAD

KGN54677.1 hypothetical protein Csa_012626 [Cucumis sativus]7.1e-5479.88Show/hide
Query:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE
        MAEPQTRENLAQNLSLSPLSRSSF  AA D DPVD PLSPPAVA        +EDPDLIREPKRRKHCPTALENLDELTSASNSSF FTFDTKFCGFSAE
Subjt:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE

Query:  ITPKFGSFNSITPEIETN--------RVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEE
        ITPKFGSFNSI PE+E N        RVEEE    ESVHKVEEEEEEEIG+ADALLE I EEEE
Subjt:  ITPKFGSFNSITPEIETN--------RVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEE

TrEMBL top hitse value%identityAlignment
A0A0A0L245 Uncharacterized protein3.5e-5479.88Show/hide
Query:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE
        MAEPQTRENLAQNLSLSPLSRSSF  AA D DPVD PLSPPAVA        +EDPDLIREPKRRKHCPTALENLDELTSASNSSF FTFDTKFCGFSAE
Subjt:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE

Query:  ITPKFGSFNSITPEIETN--------RVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEE
        ITPKFGSFNSI PE+E N        RVEEE    ESVHKVEEEEEEEIG+ADALLE I EEEE
Subjt:  ITPKFGSFNSITPEIETN--------RVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEE

A0A1S4BGV3 uncharacterized protein LOC1078081301.1e-1244.09Show/hide
Query:  SPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSD-VGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPE
        SP +  S PA     D VD P  PP  AA    +    EDPD +R+PKRRK+CPTAL+  D + SA+N  F+F+FD+KF G S  E+TPKFGSFN + P+
Subjt:  SPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSD-VGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPE

Query:  -IETNRVEEEEKKLESVHKVEEEEEEE
         + +   + EE++L+   + E++EE +
Subjt:  -IETNRVEEEEKKLESVHKVEEEEEEE

A0A1S4C4A0 uncharacterized protein LOC1078149895.6e-1242.06Show/hide
Query:  SPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPE-
        SP +  S PA     D     L P A           EDPD +R+PKRRK+CPTAL+  D + SA+N  F+F+FD+KF G S  E+TPKFGSFN + P+ 
Subjt:  SPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPE-

Query:  IETNRVEEEEKKLESVHKVEEEEEEE
        + +   E EE++L+   + E++EE +
Subjt:  IETNRVEEEEKKLESVHKVEEEEEEE

A0A3Q7JFM8 Uncharacterized protein5.6e-1244.8Show/hide
Query:  SPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPEI
        +P    S P A ++ +  D P SPP  A        IEDPD+IR+ KRRK+CP+AL+  D + S SN  F+F+FD+KF G S  E+TPKFGSFN + P  
Subjt:  SPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSA-EITPKFGSFNSITPEI

Query:  ETNRVEEEEKKLESVHKVEEEEEEE
              ++ K  E+V +VE+E+EEE
Subjt:  ETNRVEEEEKKLESVHKVEEEEEEE

A0A5D3CCB2 Uncharacterized protein1.2e-4376.64Show/hide
Query:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE
        MAEPQTRENLAQNLSLSPLSRSSF   A D DPVD PLSPPAVA        ++DPDLIREPKRRKHCPTALENLDELTSASNSSF FTFDTKFCGFSAE
Subjt:  MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAE

Query:  ITPKFGSFNSITPEIETNRVEEEEKKLESVHKVEEEE
        ITPKFGSFNSI PE+E N+ +EE +      +VEEEE
Subjt:  ITPKFGSFNSITPEIETNRVEEEEKKLESVHKVEEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCCCAAACTCGCGAAAATTTAGCCCAAAATCTATCACTTTCACCACTCTCCCGCTCCTCTTTCCCCGCCGCCGCCGCCGATCTAGATCCCGTCGACCGTCC
CCTATCACCACCTGCCGTCGCCGCCGTCGATTCCAGTGACGTAGGCATCGAGGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGTCCAACGGCTCTGGAGA
ATCTCGACGAATTAACATCGGCGTCGAATTCCAGCTTCAACTTCACCTTCGACACCAAATTCTGCGGATTCTCAGCAGAGATCACTCCGAAATTCGGATCGTTCAACTCA
ATCACACCGGAAATCGAGACGAATCGAGTAGAGGAAGAAGAGAAGAAACTAGAGTCCGTACATAAAGTTGAAGAAGAAGAAGAAGAAGAAATCGGAGTTGCGGATGCGTT
GCTAGAAGAAATTGAAGAAGAAGAAGAAGGAGGAGGTCAGGAATCTGTAGCGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGCCCCAAACTCGCGAAAATTTAGCCCAAAATCTATCACTTTCACCACTCTCCCGCTCCTCTTTCCCCGCCGCCGCCGCCGATCTAGATCCCGTCGACCGTCC
CCTATCACCACCTGCCGTCGCCGCCGTCGATTCCAGTGACGTAGGCATCGAGGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGTCCAACGGCTCTGGAGA
ATCTCGACGAATTAACATCGGCGTCGAATTCCAGCTTCAACTTCACCTTCGACACCAAATTCTGCGGATTCTCAGCAGAGATCACTCCGAAATTCGGATCGTTCAACTCA
ATCACACCGGAAATCGAGACGAATCGAGTAGAGGAAGAAGAGAAGAAACTAGAGTCCGTACATAAAGTTGAAGAAGAAGAAGAAGAAGAAATCGGAGTTGCGGATGCGTT
GCTAGAAGAAATTGAAGAAGAAGAAGAAGGAGGAGGTCAGGAATCTGTAGCGGATTGA
Protein sequenceShow/hide protein sequence
MAEPQTRENLAQNLSLSPLSRSSFPAAAADLDPVDRPLSPPAVAAVDSSDVGIEDPDLIREPKRRKHCPTALENLDELTSASNSSFNFTFDTKFCGFSAEITPKFGSFNS
ITPEIETNRVEEEEKKLESVHKVEEEEEEEIGVADALLEEIEEEEEGGGQESVAD