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Lsi01G017600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G017600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOB domain-containing protein
Genome locationchr01:16418787..16419443
RNA-Seq ExpressionLsi01G017600
SyntenyLsi01G017600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54678.1 hypothetical protein Csa_012366 [Cucumis sativus]2.2e-1850.93Show/hide
Query:  KLQLLP-FFFVAILSIFLL-SVEVDGRKSLLQKEDRKD-SKFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEE--GSEEGIPPGDEG
        KLQLL  FFFV+I+SI LL S EVDGRKSLLQKE R D +K VKQST LD DFHGEMV  +Q KK PTDLED P DQ+GE+SE +E    EE +P  +EG
Subjt:  KLQLLP-FFFVAILSIFLL-SVEVDGRKSLLQKEDRKD-SKFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEE--GSEEGIPPGDEG

Query:  EYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGD------DGGETGEGVPGDDGGETGEGVPGDDGGG-----SGEGVPGDDGGETGEGIPGDD
        EYG             D G+ G+   GD  G+ S G  GD       GGE G+    DDGG     + GDDG G     SGE     DGGE+GE +  D 
Subjt:  EYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGD------DGGETGEGVPGDDGGETGEGVPGDDGGG-----SGEGVPGDDGGETGEGIPGDD

Query:  GGK--SGEMEPGDN
         G+  S E  PGDN
Subjt:  GGK--SGEMEPGDN

TYK09628.1 hypothetical protein E5676_scaffold447G00230 [Cucumis melo var. makuwa]1.6e-2156.06Show/hide
Query:  KLQLLPFFFVAI-LSIFLLSVEVDGRKSLLQKEDRKDS-KFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEEGSEEGIPPGDEGEYG
        KLQLL FFFV+I +SI L+S +VDGRKSLLQKE R DS K V+QST LD DFHGEMV N+Q KK PTDLED P DQ+GE+SE E+GSEE +P  +EG   
Subjt:  KLQLLPFFFVAI-LSIFLLSVEVDGRKSLLQKEDRKDS-KFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEEGSEEGIPPGDEGEYG

Query:  RGTRDESEELPGDDGGETG--EWIPGD--DDGESSKGVP------GDDGGETGEGVPGD-DGGETGEGVPGDDGGGSGEGVPGDDGGE-TGEGIPGDD
             ESEE  GDDGGE+G  E   GD  D GE S G        GDD G   EG  G+  G E+GE      GGGSGE V  D+ GE + E +PGD+
Subjt:  RGTRDESEELPGDDGGETG--EWIPGD--DDGESSKGVP------GDDGGETGEGVPGD-DGGETGEGVPGDDGGGSGEGVPGDDGGE-TGEGIPGDD

WP_193386596.1 hypothetical protein, partial [Corynebacterium otitidis]1.6e-0546.67Show/hide
Query:  PGDQEGESSEGEE--GSEEGIP------PGDE----GEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETG--EGV
        PGD +G   EG+   G ++G+P      PGD+    GE G G   + + LPGDD GE G+ +PGDDD     G+PGDD GE G+G+PGDD G  G  +G+
Subjt:  PGDQEGESSEGEE--GSEEGIP------PGDE----GEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETG--EGV

Query:  PGDDGG------GSGEGVPGDDGGETGEG--IPGDDGGKSGEME--PGDN
        PGDD G      G G+G+PGDD G  GEG  +PGDD G  G+ +  PGD+
Subjt:  PGDDGG------GSGEGVPGDDGGETGEG--IPGDDGGKSGEME--PGDN

WP_212643760.1 hypothetical protein [Nocardiopsis sp. HDS12]2.8e-0545.19Show/hide
Query:  PTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIP----GDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDD
        P     PGD +G    G++G   G  PGD G+ G           GDDGG+ G   P    GDD G+   G PGD GG+ G   PGD GG+ G G PGD 
Subjt:  PTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIP----GDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDD

Query:  GGGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGD
        GG  G G PGD GG+ G G PGD GG  G   PGD
Subjt:  GGGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGD

XP_038882385.1 spore wall protein 2-like [Benincasa hispida]2.4e-3355.91Show/hide
Query:  MKLQLLPFFFVAILSIFLLSVEVDGRKSLLQKEDR-KDSKFVKQSTLLDGDFHGEMV-TNHQMKKFPTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYG
        MKLQ+L     AILSIFLLS+EVDGRKSLLQKEDR +D+K  KQST+LD DFHG+MV +NHQMKKFPTDLED G+QE ESSEG+EG EEGIP GDEGEYG
Subjt:  MKLQLLPFFFVAILSIFLLSVEVDGRKSLLQKEDR-KDSKFVKQSTLLDGDFHGEMV-TNHQMKKFPTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYG

Query:  RGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGDNKK
        RGT +          GE+GE +P D           ++GG++ E  PGDD GE+     GDDG G G+    DD GE+ EG  GD GG  G M   DN++
Subjt:  RGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGDNKK

Query:  KSRDKNVGDYIVPDHGDRRG
        +SR  +    IV D  D+RG
Subjt:  KSRDKNVGDYIVPDHGDRRG

TrEMBL top hitse value%identityAlignment
A0A0A0KYS7 Uncharacterized protein1.1e-1850.93Show/hide
Query:  KLQLLP-FFFVAILSIFLL-SVEVDGRKSLLQKEDRKD-SKFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEE--GSEEGIPPGDEG
        KLQLL  FFFV+I+SI LL S EVDGRKSLLQKE R D +K VKQST LD DFHGEMV  +Q KK PTDLED P DQ+GE+SE +E    EE +P  +EG
Subjt:  KLQLLP-FFFVAILSIFLL-SVEVDGRKSLLQKEDRKD-SKFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEE--GSEEGIPPGDEG

Query:  EYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGD------DGGETGEGVPGDDGGETGEGVPGDDGGG-----SGEGVPGDDGGETGEGIPGDD
        EYG             D G+ G+   GD  G+ S G  GD       GGE G+    DDGG     + GDDG G     SGE     DGGE+GE +  D 
Subjt:  EYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGD------DGGETGEGVPGDDGGETGEGVPGDDGGG-----SGEGVPGDDGGETGEGIPGDD

Query:  GGK--SGEMEPGDN
         G+  S E  PGDN
Subjt:  GGK--SGEMEPGDN

A0A5D3CEH4 Uncharacterized protein7.9e-2256.06Show/hide
Query:  KLQLLPFFFVAI-LSIFLLSVEVDGRKSLLQKEDRKDS-KFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEEGSEEGIPPGDEGEYG
        KLQLL FFFV+I +SI L+S +VDGRKSLLQKE R DS K V+QST LD DFHGEMV N+Q KK PTDLED P DQ+GE+SE E+GSEE +P  +EG   
Subjt:  KLQLLPFFFVAI-LSIFLLSVEVDGRKSLLQKEDRKDS-KFVKQSTLLDGDFHGEMVTNHQMKKFPTDLED-PGDQEGESSEGEEGSEEGIPPGDEGEYG

Query:  RGTRDESEELPGDDGGETG--EWIPGD--DDGESSKGVP------GDDGGETGEGVPGD-DGGETGEGVPGDDGGGSGEGVPGDDGGE-TGEGIPGDD
             ESEE  GDDGGE+G  E   GD  D GE S G        GDD G   EG  G+  G E+GE      GGGSGE V  D+ GE + E +PGD+
Subjt:  RGTRDESEELPGDDGGETG--EWIPGD--DDGESSKGVP------GDDGGETGEGVPGD-DGGETGEGVPGDDGGGSGEGVPGDDGGE-TGEGIPGDD

A0A7H5FKL3 Uncharacterized protein9.7e-0439.49Show/hide
Query:  TDLEDPGDQEGESSEGEEGSEEG----IPPGDEGEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDG
        T   DPGD +G +   + G  +G      PGD G+   GT D     PGD  G TG   PGD DG +    PGD  G TG   PGD  G TG   PGD  
Subjt:  TDLEDPGDQEGESSEGEEGSEEG----IPPGDEGEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDG

Query:  GGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGDNKKKSRDKNVGDYIVPDHGDRRG
        G +G   PGD  G TG   PGD  G +G  +PGD    +   +  D   PD G   G
Subjt:  GGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGDNKKKSRDKNVGDYIVPDHGDRRG

SwissProt top hitse value%identityAlignment
O36421 Uncharacterized gene 73 protein4.5e-0644.27Show/hide
Query:  EDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGV
        E+ G + GE  EG EG E G   G+ GE G G         G +GGE GE   G + GE  +G  G +GGE GEG  G +GGE GEG  G +GG  GEG 
Subjt:  EDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGV

Query:  PGDDGGETGEGIPGDDGGKSGEMEPGDNKKK
         G +GGE G+G  G +GG+ GE   G  + K
Subjt:  PGDDGGETGEGIPGDDGGKSGEMEPGDNKKK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGCAGCTTCTTCCCTTCTTTTTTGTTGCCATTCTTTCTATCTTTCTGCTTTCTGTAGAAGTTGATGGAAGAAAATCTTTACTTCAAAAAGAAGATAGGAAAGA
CTCTAAGTTTGTCAAGCAAAGTACACTTTTAGATGGAGATTTTCATGGTGAAATGGTGACTAATCATCAAATGAAAAAATTTCCAACTGATTTAGAAGATCCTGGGGATC
AAGAGGGCGAAAGTTCTGAAGGTGAAGAAGGATCAGAGGAAGGCATTCCTCCTGGCGATGAAGGAGAATATGGAAGAGGAACGAGAGATGAATCTGAAGAACTTCCTGGA
GATGATGGAGGAGAAACGGGAGAATGGATCCCTGGAGATGATGACGGAGAATCTAGCAAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGA
TGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGCGGATCTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGATTCCTGGAGATG
ACGGAGGCAAATCTGGAGAAATGGAACCTGGAGACAACAAAAAAAAATCTAGAGACAAGAATGTAGGAGATTATATTGTACCTGATCATGGAGATAGAAGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGCAGCTTCTTCCCTTCTTTTTTGTTGCCATTCTTTCTATCTTTCTGCTTTCTGTAGAAGTTGATGGAAGAAAATCTTTACTTCAAAAAGAAGATAGGAAAGA
CTCTAAGTTTGTCAAGCAAAGTACACTTTTAGATGGAGATTTTCATGGTGAAATGGTGACTAATCATCAAATGAAAAAATTTCCAACTGATTTAGAAGATCCTGGGGATC
AAGAGGGCGAAAGTTCTGAAGGTGAAGAAGGATCAGAGGAAGGCATTCCTCCTGGCGATGAAGGAGAATATGGAAGAGGAACGAGAGATGAATCTGAAGAACTTCCTGGA
GATGATGGAGGAGAAACGGGAGAATGGATCCCTGGAGATGATGACGGAGAATCTAGCAAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGA
TGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGCGGATCTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGATTCCTGGAGATG
ACGGAGGCAAATCTGGAGAAATGGAACCTGGAGACAACAAAAAAAAATCTAGAGACAAGAATGTAGGAGATTATATTGTACCTGATCATGGAGATAGAAGGGGGTGA
Protein sequenceShow/hide protein sequence
MKLQLLPFFFVAILSIFLLSVEVDGRKSLLQKEDRKDSKFVKQSTLLDGDFHGEMVTNHQMKKFPTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPG
DDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGDNKKKSRDKNVGDYIVPDHGDRRG