; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G017660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G017660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationchr01:16539193..16541998
RNA-Seq ExpressionLsi01G017660
SyntenyLsi01G017660
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54887.2 hypothetical protein Csa_012257 [Cucumis sativus]7.5e-15786.06Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQNQ+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMAKQS  R+VEQRKEEYDKARARIFSSQGS G V+VL H   EGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDR E+CRVNDVEKYTS+ DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSLGY+SPSPI
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ
        KTVGLNQVSR SAN PWPCAGMPY HTAFQ
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ

TYK22607.1 R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa]6.0e-16277.95Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSSQ S+GSVDVLSH  TEGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ-------------------------RAAFATFIQRSLSFPPWNMALKQLNDVLLCFFPPK
        KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ                         + AFATFIQRS   P WN+ +KQL+DVL   F PK
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ-------------------------RAAFATFIQRSLSFPPWNMALKQLNDVLLCFFPPK

XP_008455743.1 PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo]2.9e-15684.01Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSSQ S+GSVDVLSH  TEGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ    A   Q+SLSF
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

XP_011653850.1 uncharacterized protein LOC101216736 [Cucumis sativus]4.0e-15884.3Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQNQ+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMAKQS  R+VEQRKEEYDKARARIFSSQGS G V+VL H   EGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDR E+CRVNDVEKYTS+ DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSLGY+SPSPI
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        KTVGLNQVSR SAN PWPCAGMPY HTAFQ    A   Q+SLSF
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

XP_038883354.1 R3H domain-containing protein 1-like [Benincasa hispida]1.2e-15986.63Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSSASSID FPD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQT VQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILVRKTVEARFPTVCLSQIPAKQSADDKPG VKIAIRPRP+KSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGS GSVDVLS    E LDI
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
        SPNRDR EECRVN+VEK TS+KD GN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFT+QN+PPSF+GYHVPRNE SL Y+SPS I
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        KTVGLNQVSR SANAPWPCAGMPYTHTAFQ    A    +SLSF
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein1.9e-15884.3Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLT       +LRMELDIQRFLQNQ+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMAKQS  R+VEQRKEEYDKARARIFSSQGS G V+VL H   EGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDR E+CRVNDVEKYTS+ DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSLGY+SPSPI
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        KTVGLNQVSR SAN PWPCAGMPY HTAFQ    A   Q+SLSF
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

A0A1S3C2A6 R3H domain-containing protein 1-like isoform X11.4e-15684.01Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSSQ S+GSVDVLSH  TEGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ    A   Q+SLSF
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

A0A5A7SJ76 R3H domain-containing protein 1-like isoform X11.4e-15684.01Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSSQ S+GSVDVLSH  TEGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ    A   Q+SLSF
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

A0A5D3DFX8 R3H domain-containing protein 1-like isoform X12.9e-16277.95Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLT       +LRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG

Query:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI
        QGRILV+KTVEARFPT+CLSQIPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMAKQS GR+VEQRKEEYDKARARIFSSQ S+GSVDVLSH  TEGL I
Subjt:  QGRILVRKTVEARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDI

Query:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI
         PNRDRAE+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV LGY+SPS I
Subjt:  SPNRDRAEECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPI

Query:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ-------------------------RAAFATFIQRSLSFPPWNMALKQLNDVLLCFFPPK
        KTVGLNQ+SR+SAN PWPCAGMPY H+AFQ                         + AFATFIQRS   P WN+ +KQL+DVL   F PK
Subjt:  KTVGLNQVSRTSANAPWPCAGMPYTHTAFQ-------------------------RAAFATFIQRSLSFPPWNMALKQLNDVLLCFFPPK

A0A6J1DP27 R3H domain-containing protein 1-like isoform X15.5e-14580.66Show/hide
Query:  DCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEAR
        D LKDKVSMVDPFLVEAL NPRHRLT       +LRMELDIQ FLQNQEQQ+ EFQHF TSYLRLAAHRVAQHYGLQTMVQDN IDGQGRILVRKTVEA+
Subjt:  DCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEAR

Query:  FPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVN
        FP +CLSQIPAKQSADD  G VKIA+RPRP+KSSDD   CMAKQ LGR+VEQRKEEYDKARARIFSSQGS GSVDV SH FTEGLDIS NRDRAE CRVN
Subjt:  FPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVN

Query:  DVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPIKTVGLNQVSRTSA
        DV+KY+SIKDAG+  +SRVAI RDREKDLSDPDYDRSY+RYVK+LPIN TPSMNFAPFT+QNI PSF GYHVPRN+V L Y+SPSPIKTVGLN +SRT+ 
Subjt:  DVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPIKTVGLNQVSRTSA

Query:  NAPWPCAGMPYTHTAFQRAAFATFIQRSLSF
        N PWPCAGMPYTHTAFQ        Q+SLSF
Subjt:  NAPWPCAGMPYTHTAFQRAAFATFIQRSLSF

SwissProt top hitse value%identityAlignment
Q15032 R3H domain-containing protein 11.6e-0828.76Show/hide
Query:  FLVEAL-HNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVRKTVEARFPTVCLSQIP
        FLV  L +NPR R+       ++L++E +I  F+ N E    +F    TSY R+  HRVA ++GL     D+ +D  G+ ++V KT   R P    ++  
Subjt:  FLVEAL-HNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVRKTVEARFPTVCLSQIP

Query:  AKQSADDKPGHVKIAIRPRPSKSSDDAGNCM----AKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYT
             +D     K  I  R + S D   N M          +S+E+R+EEY +AR RIFS        + +     +  D S  + R +  RVN      
Subjt:  AKQSADDKPGHVKIAIRPRPSKSSDDAGNCM----AKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYT

Query:  SIKDAGNVASSRVAIFRDREKDLSDP
          KDA   +++      + E   S+P
Subjt:  SIKDAGNVASSRVAIFRDREKDLSDP

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein4.4e-6245.91Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARF
        + DK   VDPFLVEAL NPRHRLT       +LRMELD+QRFLQ+ +QQ  EFQHFPTSYLR AAHRVA HYGL T V+D G DG + RI+V K+ ++RF
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARF

Query:  PTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVND
        P   LS+IP KQS   K  H+K+ I+PRP+K S   G+ + K  L +SVE+RKE+YD+ARARIF+   +    D  S      ++ S +RD  +  +  +
Subjt:  PTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVND

Query:  VEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNI-----PPSFTGYH-VPRNEVSLGYMS-PSPIKTVGLNQ
        +E   +     +  +SR+AI RDREKD  DPDYDRS  RY+ +LP++   ++  A F +Q +        F GY       ++LG  S  SP  T GLNQ
Subjt:  VEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNI-----PPSFTGYH-VPRNEVSLGYMS-PSPIKTVGLNQ

Query:  VSRTSA-NAPWP-CAGMPYTHT--AFQRAAF-ATFIQRSLSF
         SR +A    WP  A + YTH+   F+ + F A F  + LSF
Subjt:  VSRTSA-NAPWP-CAGMPYTHT--AFQRAAF-ATFIQRSLSF

AT3G10770.1 Single-stranded nucleic acid binding R3H protein6.3e-6149.69Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVE
        + +K +MVDPFLVEAL NPRHRLT       +LRMELDIQ+F QN EQ   EF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVE

Query:  ARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVD--VLSHAFTEGLDISPNRDRAE
        +RFP VCLS+IP KQ  + +P   KIAI+PRP + S   G+    +Q+L RSVE+RKEEYDKARARIF+S  S+ S D   L     E  +   NR+   
Subjt:  ARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVD--VLSHAFTEGLDISPNRDRAE

Query:  ECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLP---INLTPS-MNFAPFTVQNIPPSFTGY--HVPR-NEVSLGYMSP-SPI
        E  VN+       +D+G   +SRVAI RDREKD  DPDYDRSY+RYV       + + PS  +F+P  +    P   G+  H+PR ++ +L Y  P +P 
Subjt:  ECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLP---INLTPS-MNFAPFTVQNIPPSFTGY--HVPR-NEVSLGYMSP-SPI

Query:  KTVGLNQVSRTSANAPWP
         +   + V   ++  PWP
Subjt:  KTVGLNQVSRTSANAPWP

AT3G10770.2 Single-stranded nucleic acid binding R3H protein3.4e-6250Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVE
        + +K +MVDPFLVEAL NPRHRLT       +LRMELDIQ+F QN EQ   EF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVE

Query:  ARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVD--VLSHAFTEGLDISPNRDRAE
        +RFP VCLS+IP KQ  + +P   KIAI+PRP + S   G+    +Q+L RSVE+RKEEYDKARARIF+S  S+ S D   L     E  +   NR+   
Subjt:  ARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVD--VLSHAFTEGLDISPNRDRAE

Query:  ECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGY--HVPR-NEVSLGYMSP-SPIKTVG
        E  VN+       +D+G   +SRVAI RDREKD  DPDYDRSY+RYV+ +P       +F+P  +    P   G+  H+PR ++ +L Y  P +P  +  
Subjt:  ECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGY--HVPR-NEVSLGYMSP-SPIKTVG

Query:  LNQVSRTSANAPWP
         + V   ++  PWP
Subjt:  LNQVSRTSANAPWP

AT3G56680.1 Single-stranded nucleic acid binding R3H protein2.7e-6749.11Show/hide
Query:  VDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARFPTVCLSQ
        VDPFLVEALHN RHRLT       +LRMELD+QR LQN EQQ  EFQHFPTSYLRLAAHRVA HYGL T VQ++G DG + RILV KT E++FP V LS+
Subjt:  VDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARFPTVCLSQ

Query:  IP-AKQSADDKPGHVKIAIRPRPSKSSD-DAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRD--RAEECRVNDVEK
        IP AKQS + K    K++I+ RPSK S   AG+    +   RSVE+RKEEYDKAR RIFS        D  S       + S +RD  +  +    +V+K
Subjt:  IP-AKQSADDKPGHVKIAIRPRPSKSSD-DAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRD--RAEECRVNDVEK

Query:  YTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPP-----SFTGYH-VPRNEVSLGYMSPSPIKTVGLNQVSRT
          SI+++G   +SRVAIFRDREKD  DPDYDR ++RY++SLP+N   + N  PF +Q IP       FTGY+ +P     LG+  P P   +     +  
Subjt:  YTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPP-----SFTGYH-VPRNEVSLGYMSPSPIKTVGLNQVSRT

Query:  SANAPWPCAGMPYTH--TAFQRAAF-ATFIQRSLSF
        +    WP A M Y H    F+  +  A F+Q+ LSF
Subjt:  SANAPWPCAGMPYTH--TAFQRAAF-ATFIQRSLSF

AT5G05100.1 Single-stranded nucleic acid binding R3H protein4.1e-6046.81Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVRKTVEAR
        + DK +MVDPFLVEAL NPRHRLT       +LRMELDIQ+F Q+ EQQ  EFQ  PTSYLRL AHRVAQHYGL  T ++  G+DG G RIL  KTVE+R
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVRKTVEAR

Query:  FPTVCLSQIPAKQ-SADDKPGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHA--------FTEGLDISPN
        +P VCLS+IP KQ     +P   KIAI+PRP++ +  +G+    +++L RSVE+RKEEYDKARARIF+S  S+ S D  + A         ++     P+
Subjt:  FPTVCLSQIPAKQ-SADDKPGHVKIAIRPRPSKSSDDAGN-CMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHA--------FTEGLDISPN

Query:  RDRAE-----ECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPS
        R+  E          DVE+   I+D+G   +SRVAI RDREKD  DPDYDR+  RYV+  P    P  NF P  +           +PR + SL Y  P 
Subjt:  RDRAE-----ECRVNDVEKYTSIKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPS

Query:  PIKTVGLNQVSRTSANAPWPCAGMPYTHT
              LN      +   WP A M Y  T
Subjt:  PIKTVGLNQVSRTSANAPWPCAGMPYTHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCG
TCTAACCAGTCATTTAAATGTTACCTTAGTTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTT
CGTATCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTACGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGGGAGGATTTTGGTGAGGAAAACTGTT
GAAGCTAGATTCCCGACCGTTTGCTTATCTCAAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATC
TGATGATGCAGGTAATTGTATGGCTAAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAAGGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTA
ATGGTTCAGTGGATGTATTGTCCCATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGT
ATCAAAGATGCCGGGAATGTGGCGTCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAG
CCTTCCAATTAATCTGACTCCGAGCATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGGCT
ATATGTCTCCTTCCCCTATCAAAACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATACTGCTTTCCAG
AGAGCTGCTTTTGCTACATTTATCCAAAGATCTCTCTCCTTTCCTCCTTGGAATATGGCCTTAAAACAGTTGAATGATGTTCTCCTTTGCTTTTTTCCCCCAAAGATTAG
AACACTTGAACTTGTTCCTTCTCACCAATCCTACTATAACATTAACAGCAACGGAAGAATAGATGACATCTCTGATGAATTCATTGTTGTTCCAAAATTCATTTTAAAAA
ACAACCCTTCCGAAAACAAAGAAATTTGTCTGGAAACCTATCTTCCAATCGTTTTATCTTTTTCATGGTTGATTAGTGTTCCCACGTTCTACCCGCTCGCTTATTCTACG
TCGTTAGTAGAGATCTATCAATTGTTTCCTTATCTTTTAACTCGAGATGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCTGCGATACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCG
TCTAACCAGTCATTTAAATGTTACCTTAGTTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTT
CGTATCTTCGACTCGCAGCTCATCGTGTTGCTCAACACTACGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGGGAGGATTTTGGTGAGGAAAACTGTT
GAAGCTAGATTCCCGACCGTTTGCTTATCTCAAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATC
TGATGATGCAGGTAATTGTATGGCTAAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAAGGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTA
ATGGTTCAGTGGATGTATTGTCCCATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGT
ATCAAAGATGCCGGGAATGTGGCGTCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAG
CCTTCCAATTAATCTGACTCCGAGCATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGGCT
ATATGTCTCCTTCCCCTATCAAAACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATACTGCTTTCCAG
AGAGCTGCTTTTGCTACATTTATCCAAAGATCTCTCTCCTTTCCTCCTTGGAATATGGCCTTAAAACAGTTGAATGATGTTCTCCTTTGCTTTTTTCCCCCAAAGATTAG
AACACTTGAACTTGTTCCTTCTCACCAATCCTACTATAACATTAACAGCAACGGAAGAATAGATGACATCTCTGATGAATTCATTGTTGTTCCAAAATTCATTTTAAAAA
ACAACCCTTCCGAAAACAAAGAAATTTGTCTGGAAACCTATCTTCCAATCGTTTTATCTTTTTCATGGTTGATTAGTGTTCCCACGTTCTACCCGCTCGCTTATTCTACG
TCGTTAGTAGAGATCTATCAATTGTTTCCTTATCTTTTAACTCGAGATGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCTGCGATACAATTGAATACAGCAGTT
AGTTAGGGGATAGTGTTAATTAAAACTGATTTACTCAGCTAATTATATACTGACTTTGTTGGTTCTGAAACCTCCAATTATAATCAATTATTTTAAATTAAGCTCTTTTA
TTTATA
Protein sequenceShow/hide protein sequence
MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTSHLNVTLVLRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTV
EARFPTVCLSQIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAKQSLGRSVEQRKEEYDKARARIFSSQGSNGSVDVLSHAFTEGLDISPNRDRAEECRVNDVEKYTS
IKDAGNVASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLGYMSPSPIKTVGLNQVSRTSANAPWPCAGMPYTHTAFQ
RAAFATFIQRSLSFPPWNMALKQLNDVLLCFFPPKIRTLELVPSHQSYYNINSNGRIDDISDEFIVVPKFILKNNPSENKEICLETYLPIVLSFSWLISVPTFYPLAYST
SLVEIYQLFPYLLTRDAPLYQQSLSFDYLRYN