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Lsi01G017810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G017810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE
Genome locationchr01:17092360..17092590
RNA-Seq ExpressionLsi01G017810
SyntenyLsi01G017810
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025988.1 hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]2.6e-1481.25Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLLLFLALSPS+ PAE HR  +  GG++SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA

KAG2683596.1 hypothetical protein I3760_10G039000 [Carya illinoinensis]2.7e-0869.64Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP
        +FS RS+ ++IV+AVSL+++PL+LPPLPPPP+LLLF+PVLIMSLL+ LALS S VP
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP

KAG2687345.1 hypothetical protein I3760_09G047200 [Carya illinoinensis]3.6e-0863.33Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP
        M R + S+ ++ +++V+ VSL++LPLV+PPLPPPP+LLLF+PVLIMSLL+ LALSPSQ P
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP

KAG6603314.1 hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2390.91Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRV-AEGGGGHDSA
        MVRAFFSLRSVAMLIVVA SLLILPLVLPPLPPPPVLLLF+PVLIM  LLFLALSPS+VPAEEHRV A+GGGGHDSA
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRV-AEGGGGHDSA

TYK04223.1 hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]1.3e-1381.25Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLLLFLALSPS+ PAE HR  +  GG +SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA

TrEMBL top hitse value%identityAlignment
A0A0A0L0Y7 Uncharacterized protein1.5e-2085.53Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA
        MVR FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLF+PVLIMSLLLFLALSPS+VPAEEH   +GG   +SA
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA

A0A2N9F7M5 Uncharacterized protein7.8e-0967.27Show/hide
Query:  FSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP
        +++R + +++++ VSLL+LPLVLPPLPPPP+LLLF+PVL+MSLL+FLAL+PSQVP
Subjt:  FSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP

A0A5A7SII5 Uncharacterized protein1.2e-1481.25Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLLLFLALSPS+ PAE HR  +  GG++SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA

A0A5B7AL58 Uncharacterized protein (Fragment)2.0e-0965Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP
        M+  FFSLR+V +++V+ VSLL+LP+VLPPLPPPP++LLFIP+LIM++L+ LA SPSQ+P
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVP

A0A5D3BWW3 Uncharacterized protein6.1e-1481.25Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLLLFLALSPS+ PAE HR  +  GG +SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.7e-0660.38Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL +P+ IM LL+ LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE5.9e-0660.38Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL +P+ IM LL+ LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.8e-0747.22Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA
        +FS+ S+ +L+ V  SL+ILPLVLPPLPPPP +L+ +PV ++ LLL LA  P+   +       GGGG + A
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA

Q8RWS1 Protein ORGAN SIZE RELATED 12.7e-0655.17Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPA
        +  + RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPA

Q8RXL7 ARGOS-like protein2.7e-0659.26Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS
        ++FSL S+ +L+ +  SLLILPL+LPPLPPPP +LL IP+ IM LL+ LA  PS
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS

Arabidopsis top hitse value%identityAlignment
AT2G41230.1 unknown protein1.9e-0755.17Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPA
        +  + RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPA

AT2G44080.1 ARGOS-like1.9e-0759.26Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS
        ++FSL S+ +L+ +  SLLILPL+LPPLPPPP +LL IP+ IM LL+ LA  PS
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS

AT3G59900.1 auxin-regulated gene involved in organ size4.2e-0760.38Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL +P+ IM LL+ LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGGCATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTTTCTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGTGCT
GCTGCTGTTTATTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGTTATCGCCGTCACAGGTTCCGGCGGAGGAGCACCGTGTGGCTGAAGGCGGCGGCGGTCACG
ATTCGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGGGCATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTTTCTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGTGCT
GCTGCTGTTTATTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGTTATCGCCGTCACAGGTTCCGGCGGAGGAGCACCGTGTGGCTGAAGGCGGCGGCGGTCACG
ATTCGGCTTGA
Protein sequenceShow/hide protein sequence
MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLLFLALSPSQVPAEEHRVAEGGGGHDSA