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Lsi01G018080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAlpha-carbonic anhydrase domain-containing protein
Genome locationchr01:17972877..17982361
RNA-Seq ExpressionLsi01G018080
SyntenyLsi01G018080
Gene Ontology termsGO:0006730 - one-carbon metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0004089 - carbonate dehydratase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001148 - Alpha carbonic anhydrase domain
IPR023561 - Carbonic anhydrase, alpha-class
IPR036398 - Alpha carbonic anhydrase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595685.1 Alpha carbonic anhydrase 4, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2955.3Show/hide
Query:  FFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAF
        FFF N R N+   F   FL     LSSI+KAS SEV DES F+Y EG+G GP+ W KL  +W+SC KGKYQSPINIVEE+V VLP+LGKL+RDY PAPA 
Subjt:  FFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAF

Query:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPH
        +KNRGHD+    K       ++G R +    H
Subjt:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPH

KAG7027647.1 Alpha carbonic anhydrase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-2955.3Show/hide
Query:  FFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAF
        FFF N R N+   F   FL     LSSI+KAS SEV DES F+Y EG+G GP+ W KL  +W+SC KGKYQSPINIVEE+V VLP+LGKL+RDY PAPA 
Subjt:  FFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAF

Query:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPH
        +KNRGHD+    K       ++G R      H
Subjt:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPH

XP_011653762.1 alpha carbonic anhydrase 4 [Cucumis sativus]6.6e-4585.59Show/hide
Query:  FFFFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAP
        FFFF KNYR NFL LFP+LF+LSSFSLSS+  AS+SEVGDES FSYNEG+GNGPKEWGKLKADWKSCE+GKYQSPINIVEEDVQVLP+LGKLRRDYNPAP
Subjt:  FFFFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAP

Query:  AFVKNRGHDVV
        A VKNRGHD++
Subjt:  AFVKNRGHDVV

XP_011653762.1 alpha carbonic anhydrase 4 [Cucumis sativus]2.2e-0378.79Show/hide
Query:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPHK
        +K   HD  GLK NARPTQALDGRRIQFYTPHK
Subjt:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPHK

XP_011653762.1 alpha carbonic anhydrase 4 [Cucumis sativus]8.1e-4383.93Show/hide
Query:  SFFFFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPA
        +FFFFF+    NFLFLF + F +SSFSLSSI+ ASQSEVGDES FSYNEG+GNGPKEWGKLK+DWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPA
Subjt:  SFFFFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPA

Query:  PAFVKNRGHDVV
        PA VKNRGHDV+
Subjt:  PAFVKNRGHDVV

XP_038883754.1 alpha carbonic anhydrase 4-like [Benincasa hispida]3.7e-0375.76Show/hide
Query:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPHK
        +KN  H+   LKKNARPTQALDGR+IQFYTPHK
Subjt:  VKNRGHDVVGLKKNARPTQALDGRRIQFYTPHK

XP_038883754.1 alpha carbonic anhydrase 4-like [Benincasa hispida]2.3e-2956.49Show/hide
Query:  FFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFV
        FF N R N+   F   FL     LSSI+KAS SEV DES F+Y EG+G GPK W KL   W+SC KGKYQSPINIVEE+V VLP+LGKL+RDYNPAPA +
Subjt:  FFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFV

Query:  KNRGHDVVGLKKNARPTQALDGRRIQFYTPH
        KNRGHD+    K       ++G R +    H
Subjt:  KNRGHDVVGLKKNARPTQALDGRRIQFYTPH

TrEMBL top hitse value%identityAlignment
A0A0A0KYG6 Alpha-carbonic anhydrase domain-containing protein5.3e-3290.41Show/hide
Query:  GDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        GDES FSYNEG+GNGPKEWGKLKADWKSCE+GKYQSPINIVEEDVQVLP+LGKLRRDYNPAPA VKNRGHD++
Subjt:  GDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV

A0A0D2RVW7 Alpha-carbonic anhydrase domain-containing protein2.6e-2361.05Show/hide
Query:  FPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV
        F +LF+     L  IA AS +EVG+ES F+Y+EGSG GPKEWG L  DWK CE GK QSPI+++   +QV P LGKL+RDY PAPA VKNRGHD+
Subjt:  FPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV

A0A5D2JHT9 Alpha-carbonic anhydrase domain-containing protein2.6e-2361.05Show/hide
Query:  FPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV
        F +LF+     L  IA AS +EVG+ES F+Y+EGSG GPKEWG L  DWK CE GK QSPI+++   +QV P LGKL+RDY PAPA VKNRGHD+
Subjt:  FPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV

A0A5D2JI04 Alpha-carbonic anhydrase domain-containing protein2.6e-2361.05Show/hide
Query:  FPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV
        F +LF+     L  IA AS +EVG+ES F+Y+EGSG GPKEWG L  DWK CE GK QSPI+++   +QV P LGKL+RDY PAPA VKNRGHD+
Subjt:  FPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV

A0A6J1HMY4 alpha carbonic anhydrase 4-like1.1e-2956.49Show/hide
Query:  FFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFV
        FF N R N+   F   FL     LSSI+KAS SEV DES F+Y EG+G GPK W KL   W+SC KGKYQSPINIVEE+V VLP+LGKL+RDYNPAPA +
Subjt:  FFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFV

Query:  KNRGHDVVGLKKNARPTQALDGRRIQFYTPH
        KNRGHD+    K       ++G R +    H
Subjt:  KNRGHDVVGLKKNARPTQALDGRRIQFYTPH

SwissProt top hitse value%identityAlignment
F4IHR4 Alpha carbonic anhydrase 25.7e-1544Show/hide
Query:  FLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        F+FL    F+ +   LS  A     EV DE  FSY     NGP +WGKL+ +WK C KG+ QSPI+++ + V+++  L KL R Y P  A +KNRGHD++
Subjt:  FLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV

Q75N34 Dioscorin DB3S2.2e-1441.67Show/hide
Query:  LFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV-VGLKKNA
        L LLSS   S +A         E  FSY EG+ NGP+ WG LK +W++C KG  QSPI + +  V     LG+LRR+Y    A ++N GHDV V  K NA
Subjt:  LFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDV-VGLKKNA

Query:  RPTQ----ALDGRRIQFYTP
                A   +RI F++P
Subjt:  RPTQ----ALDGRRIQFYTP

Q75N35 Dioscorin DB3L5.5e-1843.33Show/hide
Query:  LFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVVGLKKNAR
        LFLLSS   S ++ A      DE  FSY EGS NGP+ WG L  +WK+C  G  QSPIN+ ++ V   P LGKLR  Y  A A +KN GHD++   K+  
Subjt:  LFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVVGLKKNAR

Query:  PTQALDG-----RRIQFYTP
         +Q ++      +RI F++P
Subjt:  PTQALDG-----RRIQFYTP

Q84UV8 Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-33.9e-1646.24Show/hide
Query:  LFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        +  +S   LSS+  A   EV DES FSY+E S NGP  WG ++ DWK C  GK QSPI+I +   +V+  L  L++DY P+ A + NRGHD++
Subjt:  LFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV

Q8L817 Alpha carbonic anhydrase 71.3e-1938.28Show/hide
Query:  NYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNR
        NY S     F  LF + +    S A +S  EV DE  F+Y +    GP+ WG+LK +W+ C KG+ QSPI+++ E V ++  LG+L RDYNP+ A +KNR
Subjt:  NYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNR

Query:  GHDVVGLKKNARPTQALDGRRIQFYTPH
        GHD++   ++   T  ++G   +    H
Subjt:  GHDVVGLKKNARPTQALDGRRIQFYTPH

Arabidopsis top hitse value%identityAlignment
AT1G08065.1 alpha carbonic anhydrase 55.8e-1539.36Show/hide
Query:  LFLLSSFSLSSIAKA-SQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        +F L   S++ ++ +    EV DE++F+Y +    GP+ WG+LK +W  C KG  QSPI++ ++ V +   LG LR  Y P+ A +KNRGHD++
Subjt:  LFLLSSFSLSSIAKA-SQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV

AT1G08080.1 alpha carbonic anhydrase 79.3e-2138.28Show/hide
Query:  NYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNR
        NY S     F  LF + +    S A +S  EV DE  F+Y +    GP+ WG+LK +W+ C KG+ QSPI+++ E V ++  LG+L RDYNP+ A +KNR
Subjt:  NYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNR

Query:  GHDVVGLKKNARPTQALDGRRIQFYTPH
        GHD++   ++   T  ++G   +    H
Subjt:  GHDVVGLKKNARPTQALDGRRIQFYTPH

AT2G28210.1 alpha carbonic anhydrase 26.9e-1648.65Show/hide
Query:  VGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        V DE  FSY     NGP +WGKL+ +WK C KG+ QSPI+++ + V+++  L KL R Y P  A +KNRGHD++
Subjt:  VGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV

AT4G20990.1 alpha carbonic anhydrase 43.8e-1440.4Show/hide
Query:  LFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        +F   + F+  SF   S A    SEV DE+ F+Y + +  GP+ WGK+   WK C  G+YQSPI++  E V ++       R Y PAPA + NRGHD++
Subjt:  LFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV

AT5G56330.1 alpha carbonic anhydrase 81.3e-1445.57Show/hide
Query:  ASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV
        A   EV DE+ FSY      GP +WG L A+WK C  GK QSPI++ +++V V  + G LR  Y P+   +KNRGHD++
Subjt:  ASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRGHDVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTTCTTCTTCTTCTTCAAAAATTACAGATCCAATTTTCTTTTTCTCTTTCCTGTTTTATTCCTTCTCTCTTCATTTTCTCTCTCCTCCATTGCCAAGGCATC
TCAATCTGAAGTAGGTGATGAATCTCGATTCAGTTACAATGAGGGAAGTGGAAATGGACCAAAAGAATGGGGAAAGCTAAAAGCAGATTGGAAATCTTGTGAGAAAGGGA
AGTATCAATCTCCCATTAATATTGTTGAAGAAGATGTGCAAGTTCTTCCTCAGCTTGGAAAACTCAGACGGGATTACAACCCGGCTCCTGCCTTCGTCAAGAATCGAGGA
CACGACGTTGTGGGTTTGAAGAAAAATGCAAGGCCAACACAAGCATTAGATGGAAGACGAATTCAATTTTATACTCCACATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTAGGGGATAGTCTTAGAGTTGCAGAGCAGCCATGGCCTCCTTCTTCTTCTTCTTCAAAAATTACAGATCCAATTTTCTTTTTCTCTTTCCTGTTTTATTCCTTC
TCTCTTCATTTTCTCTCTCCTCCATTGCCAAGGCATCTCAATCTGAAGTAGGTGATGAATCTCGATTCAGTTACAATGAGGGAAGTGGAAATGGACCAAAAGAATGGGGA
AAGCTAAAAGCAGATTGGAAATCTTGTGAGAAAGGGAAGTATCAATCTCCCATTAATATTGTTGAAGAAGATGTGCAAGTTCTTCCTCAGCTTGGAAAACTCAGACGGGA
TTACAACCCGGCTCCTGCCTTCGTCAAGAATCGAGGACACGACGTTGTGGGTTTGAAGAAAAATGCAAGGCCAACACAAGCATTAGATGGAAGACGAATTCAATTTTATA
CTCCACATAAGTGA
Protein sequenceShow/hide protein sequence
MASFFFFFKNYRSNFLFLFPVLFLLSSFSLSSIAKASQSEVGDESRFSYNEGSGNGPKEWGKLKADWKSCEKGKYQSPINIVEEDVQVLPQLGKLRRDYNPAPAFVKNRG
HDVVGLKKNARPTQALDGRRIQFYTPHK