; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G018130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpolygalacturonase QRT3-like
Genome locationchr01:18234396..18241729
RNA-Seq ExpressionLsi01G018130
SyntenyLsi01G018130
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR039279 - Polygalacturonase QRT3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439486.1 PREDICTED: polygalacturonase QRT3-like [Cucumis melo]8.0e-16373.82Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E
        ESLL+A S  Y +  + E SL+ GIRNLGG QINLDG N+LISRPLRLP  GVGNVMIHGGSLRASDDFP + YLIELSSS+AA     ++ + NS   +
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E

Query:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD
         +  SSSSSYSYE+I+F+DLLLDSN+RGGGIS+INSLR TI+NCYITHFTT GISVQ GHE YIRTSFLGQHITAG D GERNFS  GI+L  NDN++TD
Subjt:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD

Query:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG
        VVIFSAA GIL+SGQAN+LTG+HCYNKAT FGG GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I NTFFLGD+ I LKSINGV +GVNIVDNMF G
Subjt:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG

Query:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV
        S+KGVAIV+LDESKS FK+I +V +ERNN  GMQ KST  + E++GNGTSW++DFN +L+FPNLI+NVQY+FRS D+GFP+HIVRNVS+N+VVIETDVAV
Subjt:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV

Query:  V
        V
Subjt:  V

XP_022146708.1 polygalacturonase QRT3-like isoform X1 [Momordica charantia]8.0e-17178.66Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN
        ESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVGN++I GGSLRASDDFP + YLI+LS S++++      KIKKQK   
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN

Query:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS
        SME V L+SSSSY+YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQHITAGAD GERNFS  GI+L  NDNS
Subjt:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS

Query:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM
        VTDVV+FSAA  IL+SGQANILTG+HCYNKAT FGG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+NIVDNM
Subjt:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM

Query:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD
        F GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSWI+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+D
Subjt:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD

Query:  VAV
        VAV
Subjt:  VAV

XP_022146709.1 polygalacturonase QRT3-like isoform X2 [Momordica charantia]8.0e-17178.66Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN
        ESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVGN++I GGSLRASDDFP + YLI+LS S++++      KIKKQK   
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN

Query:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS
        SME V L+SSSSY+YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQHITAGAD GERNFS  GI+L  NDNS
Subjt:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS

Query:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM
        VTDVV+FSAA  IL+SGQANILTG+HCYNKAT FGG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+NIVDNM
Subjt:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM

Query:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD
        F GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSWI+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+D
Subjt:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD

Query:  VAV
        VAV
Subjt:  VAV

XP_038881228.1 polygalacturonase QRT3-like [Benincasa hispida]1.6e-17479.46Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIEL-----SSSAAAAQKIKKQKVTN
        ESLLRALS  Y +  + E SL+ GIRNLGGAQINLDG N+LISRPLRLP AGVGNVMIHGGSLRASDDFP + YLIEL     SSS +AA+KIK Q+  N
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIEL-----SSSAAAAQKIKKQKVTN

Query:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS
        S ED  LSSSSSY+YE+I+FRDLLLDSNYRGGGIS++NSLRTTI+NCYITHFTTTGISVQ GHETYIR+SFLGQHITAG D GERNFS  GI L  NDN+
Subjt:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS

Query:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM
        VTDVVIFSAA GI++SGQANI+TG+HCYNKAT FGG GIYL+LPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSING+V+GVNIVDNM
Subjt:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM

Query:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD
        F GS KGVAIV+LDESKS FK+I +VVIERNNA GMQ+KST  + E++GNGTSWI+DFNS+L FPN IRNVQYSFRS D+GFP+HIVRNVSENRVVIETD
Subjt:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD

Query:  VAVV
        VAVV
Subjt:  VAVV

XP_038883320.1 LOW QUALITY PROTEIN: polygalacturonase QRT3-like [Benincasa hispida]1.1e-19188.4Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSS------AAAAQKIKKQKVT
        ESLLRALS  Y + KS+ SSLIG I+NLGGAQINLDG NYLISRPLRLP AGVGNVMIHGGSLRASDDFP N YLIELSSS       AAAQKIK  KV 
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSS------AAAAQKIKKQKVT

Query:  NSMEDVNLSSS-SSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNND
        NS ED NLSSS SSYSYEFITFRDLLLDSNYRGGGISIINSLRTTI+NCYITHFTTTGISVQSGHETYI+T+FLGQHITAGADLGERNFSAIGINLN+ND
Subjt:  NSMEDVNLSSS-SSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNND

Query:  NSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVD
        NSVTDVVIFSAAIGILISGQANILTGIHCYNKAT +GG GIYLKLPGLTQTRI+NSYMDFTGIVAEDPVQLLIS+TFFLGDASI+LKSINGVVNGVN++D
Subjt:  NSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVD

Query:  NMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIE
        N+FCGSEKGVAIVELDES+SEFKKI RVVIERNNAIGMQ+KSTAANGEIKGNGTSWI+DFN ILVF NLIRNVQYSFRSID GF RHIVRNVSENRVVIE
Subjt:  NMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIE

Query:  TDVAV
        TDVAV
Subjt:  TDVAV

TrEMBL top hitse value%identityAlignment
A0A1S3AYU3 polygalacturonase QRT3-like3.9e-16373.82Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E
        ESLL+A S  Y +  + E SL+ GIRNLGG QINLDG N+LISRPLRLP  GVGNVMIHGGSLRASDDFP + YLIELSSS+AA     ++ + NS   +
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E

Query:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD
         +  SSSSSYSYE+I+F+DLLLDSN+RGGGIS+INSLR TI+NCYITHFTT GISVQ GHE YIRTSFLGQHITAG D GERNFS  GI+L  NDN++TD
Subjt:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD

Query:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG
        VVIFSAA GIL+SGQAN+LTG+HCYNKAT FGG GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I NTFFLGD+ I LKSINGV +GVNIVDNMF G
Subjt:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG

Query:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV
        S+KGVAIV+LDESKS FK+I +V +ERNN  GMQ KST  + E++GNGTSW++DFN +L+FPNLI+NVQY+FRS D+GFP+HIVRNVS+N+VVIETDVAV
Subjt:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV

Query:  V
        V
Subjt:  V

A0A5A7UFF1 Polygalacturonase QRT3-like1.1e-16273.57Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E
        ESLL+A S  Y +  + E SL+ GIRNLGG QINLDG N+LISRPLRLP  GVGNVMIHGGSLRASDDFP + YLIELSSS+AA     ++ + NS   +
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E

Query:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD
         +  SSSSSY+YE+I+F+DLLLDSN+RGGGIS+INSLR TI+NCYITHFTT GISVQ GHE YIRTSFLGQHITAG D GERNFS  GI+L  NDN++TD
Subjt:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD

Query:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG
        VVIFSAA GIL+SGQAN+LTG+HCYNKAT FGG GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I NTFFLGD+ I LKSINGV +GVNIVDNMF G
Subjt:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG

Query:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV
        S+KGVAIV+LDESKS FK+I +V +ERN+  GMQ KST  + E++GNGTSW++DFN +L+FPNLI+NVQY+FRS D+GFP+HIVRNVS+NRVVIETDVAV
Subjt:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV

Query:  V
        V
Subjt:  V

A0A6J1CYV3 polygalacturonase QRT3-like isoform X23.9e-17178.66Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN
        ESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVGN++I GGSLRASDDFP + YLI+LS S++++      KIKKQK   
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN

Query:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS
        SME V L+SSSSY+YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQHITAGAD GERNFS  GI+L  NDNS
Subjt:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS

Query:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM
        VTDVV+FSAA  IL+SGQANILTG+HCYNKAT FGG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+NIVDNM
Subjt:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM

Query:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD
        F GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSWI+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+D
Subjt:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD

Query:  VAV
        VAV
Subjt:  VAV

A0A6J1CZ95 polygalacturonase QRT3-like isoform X13.9e-17178.66Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN
        ESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVGN++I GGSLRASDDFP + YLI+LS S++++      KIKKQK   
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAA-----QKIKKQKVTN

Query:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS
        SME V L+SSSSY+YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQHITAGAD GERNFS  GI+L  NDNS
Subjt:  SMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNS

Query:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM
        VTDVV+FSAA  IL+SGQANILTG+HCYNKAT FGG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+NIVDNM
Subjt:  VTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNM

Query:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD
        F GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSWI+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+D
Subjt:  FCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETD

Query:  VAV
        VAV
Subjt:  VAV

E5GCM0 Polygalacturonase3.9e-16373.82Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E
        ESLL+A S  Y +  + E SL+ GIRNLGG QINLDG N+LISRPLRLP  GVGNVMIHGGSLRASDDFP + YLIELSSS+AA     ++ + NS   +
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSM--E

Query:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD
         +  SSSSSYSYE+I+F+DLLLDSN+RGGGIS+INSLR TI+NCYITHFTT GISVQ GHE YIRTSFLGQHITAG D GERNFS  GI+L  NDN++TD
Subjt:  DVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTD

Query:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG
        VVIFSAA GIL+SGQAN+LTG+HCYNKAT FGG GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I NTFFLGD+ I LKSINGV +GVNIVDNMF G
Subjt:  VVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCG

Query:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV
        S+KGVAIV+LDESKS FK+I +V +ERNN  GMQ KST  + E++GNGTSW++DFN +L+FPNLI+NVQY+FRS D+GFP+HIVRNVS+N+VVIETDVAV
Subjt:  SEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV

Query:  V
        V
Subjt:  V

SwissProt top hitse value%identityAlignment
O49432 Polygalacturonase QRT39.3e-13059.5Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV
        +++L+A+  A++ P      L+ GI +LGGA+I+L G +YLISRPLR P+AG GN++I GG+LRAS+DFPV+ YLIEL                      
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV

Query:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDV
          SS   Y +E+IT RDLL+D NYRGG I++INSLRT+I+NCYIT F  T GI V+SGHETYIR SFLGQHITAG D GER+FS   INL  NDN+VTD 
Subjt:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDV

Query:  VIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGS
        VIFSA IG+++SGQAN+L+G+HCYNKAT FGG GIYL+LPGLTQ RIVNSY+D+TGIVAEDPVQL IS TFFLGDA I LKSI G + GV+IVDNMF GS
Subjt:  VIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGS

Query:  EKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAV
          GV IV+LD+  + F  +G+VV++RN+  GM  KST A G + GNGTSW +DFN +L+FP+LI +VQY+  + ++G FP H +RNVS+NRVV+ET+  V
Subjt:  EKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAV

Arabidopsis top hitse value%identityAlignment
AT4G20040.1 Pectin lyase-like superfamily protein1.1e-10149.62Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV
        +++L AL+ A++     E  ++  + +LGG  I+L G +Y+I +PLR P++G GN+++ GG+ RAS+ FP + +L+EL   A+ A+K  K     S  D 
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV

Query:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDVV
            SS   YE +TF+D+L DS +RGGGI +I+S R  I NCY  HFTT GI VQ GHETYI  SFLGQH T G D  ER F+  GI++++NDN++TDVV
Subjt:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDVV

Query:  IFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGSE
        IFSA IGI ++G AN++TG+HCYNKAT FGG+GI +K      TRI N Y+D+TGIV EDPV + ++N  FLGDA+I L+S++G ++GVNIV+NMF G+ 
Subjt:  IFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGSE

Query:  K-GVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV
        K    IV+L+    EF  I +VVI++NNA GM +KST     +  NGT WI DF+ +LVFPN I + Q+SF +     P + V NVS N VV+ETD AV
Subjt:  K-GVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAV

AT4G20050.1 Pectin lyase-like superfamily protein6.6e-13159.5Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV
        +++L+A+  A++ P      L+ GI +LGGA+I+L G +YLISRPLR P+AG GN++I GG+LRAS+DFPV+ YLIEL                      
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV

Query:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDV
          SS   Y +E+IT RDLL+D NYRGG I++INSLRT+I+NCYIT F  T GI V+SGHETYIR SFLGQHITAG D GER+FS   INL  NDN+VTD 
Subjt:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDV

Query:  VIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGS
        VIFSA IG+++SGQAN+L+G+HCYNKAT FGG GIYL+LPGLTQ RIVNSY+D+TGIVAEDPVQL IS TFFLGDA I LKSI G + GV+IVDNMF GS
Subjt:  VIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGS

Query:  EKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAV
          GV IV+LD+  + F  +G+VV++RN+  GM  KST A G + GNGTSW +DFN +L+FP+LI +VQY+  + ++G FP H +RNVS+NRVV+ET+  V
Subjt:  EKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAV

AT4G20050.2 Pectin lyase-like superfamily protein6.6e-13159.5Show/hide
Query:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV
        +++L+A+  A++ P      L+ GI +LGGA+I+L G +YLISRPLR P+AG GN++I GG+LRAS+DFPV+ YLIEL                      
Subjt:  ESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDV

Query:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDV
          SS   Y +E+IT RDLL+D NYRGG I++INSLRT+I+NCYIT F  T GI V+SGHETYIR SFLGQHITAG D GER+FS   INL  NDN+VTD 
Subjt:  NLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDV

Query:  VIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGS
        VIFSA IG+++SGQAN+L+G+HCYNKAT FGG GIYL+LPGLTQ RIVNSY+D+TGIVAEDPVQL IS TFFLGDA I LKSI G + GV+IVDNMF GS
Subjt:  VIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGS

Query:  EKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAV
          GV IV+LD+  + F  +G+VV++RN+  GM  KST A G + GNGTSW +DFN +L+FP+LI +VQY+  + ++G FP H +RNVS+NRVV+ET+  V
Subjt:  EKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCACTTCTCCGAGCATTGTCTCATGCCTACGAGACGCCTAAGAGTGAAGAGTCGTCGTTGATCGGCGGCATCAGGAATCTGGGAGGTGCTCAGATCAATCTAGA
CGGTGAAAATTACTTGATCAGTCGTCCATTGCGATTACCGACGGCTGGTGTAGGCAATGTTATGATACACGGAGGAAGTTTACGCGCTTCAGACGATTTTCCCGTTAATA
GTTACCTGATCGAACTGTCGTCGTCGGCGGCGGCGGCGCAGAAAATTAAAAAGCAGAAAGTGACGAACTCCATGGAAGATGTGAACCTTAGTTCTTCTTCATCTTATAGT
TACGAATTCATCACTTTCAGAGATCTTCTATTGGATTCCAATTACAGAGGCGGCGGCATTTCAATCATCAATTCATTAAGAACAACCATAGAAAATTGCTACATCACACA
TTTCACCACCACCGGAATTTCAGTTCAAAGCGGCCACGAAACCTACATCCGAACCTCCTTCCTCGGCCAACACATCACCGCCGGCGCCGATCTCGGTGAACGGAACTTCT
CCGCCATCGGAATCAACCTCAACAATAATGACAACTCTGTTACCGATGTCGTCATTTTCTCCGCCGCCATTGGAATCCTCATCTCCGGCCAAGCGAACATCCTCACAGGC
ATTCATTGCTACAACAAGGCCACCGCATTCGGCGGCGTTGGAATTTACTTGAAATTACCTGGATTAACACAAACCAGAATCGTGAATTCGTACATGGATTTTACCGGAAT
CGTAGCGGAAGATCCAGTTCAACTCCTGATTTCTAATACATTCTTCCTTGGCGATGCTTCGATTAGACTGAAATCGATTAACGGCGTTGTGAATGGAGTGAACATTGTGG
ATAATATGTTTTGTGGATCGGAGAAAGGAGTGGCGATTGTTGAACTCGATGAATCGAAATCGGAATTCAAGAAAATAGGTCGGGTTGTGATTGAGAGGAACAACGCGATT
GGAATGCAGATGAAATCGACGGCGGCGAACGGAGAAATTAAAGGAAATGGAACTTCGTGGATTATGGATTTCAATTCGATTTTGGTGTTTCCGAATCTGATTAGGAATGT
TCAATACTCATTTCGAAGCATTGATAGTGGATTTCCAAGGCACATTGTGAGAAATGTATCGGAAAATCGAGTGGTGATTGAGACGGACGTTGCGGTTGTTTTAATCGATT
TTCATTTTATAAGAAGAATATCTATATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCACTTCTCCGAGCATTGTCTCATGCCTACGAGACGCCTAAGAGTGAAGAGTCGTCGTTGATCGGCGGCATCAGGAATCTGGGAGGTGCTCAGATCAATCTAGA
CGGTGAAAATTACTTGATCAGTCGTCCATTGCGATTACCGACGGCTGGTGTAGGCAATGTTATGATACACGGAGGAAGTTTACGCGCTTCAGACGATTTTCCCGTTAATA
GTTACCTGATCGAACTGTCGTCGTCGGCGGCGGCGGCGCAGAAAATTAAAAAGCAGAAAGTGACGAACTCCATGGAAGATGTGAACCTTAGTTCTTCTTCATCTTATAGT
TACGAATTCATCACTTTCAGAGATCTTCTATTGGATTCCAATTACAGAGGCGGCGGCATTTCAATCATCAATTCATTAAGAACAACCATAGAAAATTGCTACATCACACA
TTTCACCACCACCGGAATTTCAGTTCAAAGCGGCCACGAAACCTACATCCGAACCTCCTTCCTCGGCCAACACATCACCGCCGGCGCCGATCTCGGTGAACGGAACTTCT
CCGCCATCGGAATCAACCTCAACAATAATGACAACTCTGTTACCGATGTCGTCATTTTCTCCGCCGCCATTGGAATCCTCATCTCCGGCCAAGCGAACATCCTCACAGGC
ATTCATTGCTACAACAAGGCCACCGCATTCGGCGGCGTTGGAATTTACTTGAAATTACCTGGATTAACACAAACCAGAATCGTGAATTCGTACATGGATTTTACCGGAAT
CGTAGCGGAAGATCCAGTTCAACTCCTGATTTCTAATACATTCTTCCTTGGCGATGCTTCGATTAGACTGAAATCGATTAACGGCGTTGTGAATGGAGTGAACATTGTGG
ATAATATGTTTTGTGGATCGGAGAAAGGAGTGGCGATTGTTGAACTCGATGAATCGAAATCGGAATTCAAGAAAATAGGTCGGGTTGTGATTGAGAGGAACAACGCGATT
GGAATGCAGATGAAATCGACGGCGGCGAACGGAGAAATTAAAGGAAATGGAACTTCGTGGATTATGGATTTCAATTCGATTTTGGTGTTTCCGAATCTGATTAGGAATGT
TCAATACTCATTTCGAAGCATTGATAGTGGATTTCCAAGGCACATTGTGAGAAATGTATCGGAAAATCGAGTGGTGATTGAGACGGACGTTGCGGTTGTTTTAATCGATT
TTCATTTTATAAGAAGAATATCTATATTTTAA
Protein sequenceShow/hide protein sequence
MESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYS
YEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTG
IHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAI
GMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVVLIDFHFIRRISIF