; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G018160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:18314914..18315256
RNA-Seq ExpressionLsi01G018160
SyntenyLsi01G018160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043464.1 hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa]2.9e-1043.24Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCC
        M T++L    +A+ V+L CF++  +G G WNC+ PCS     +SC   C   ++G G CIPK P +S+E VCCC
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCC

KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]6.9e-1252.63Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN
        M TQ+L T SI +++IL C +S+ KGD    NCV PCS+   D SC   CI ++ GAGFC PKLP  S +K CCCN
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]9.1e-1246.05Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND
        M +++LFT   A+++++  F SS KGD F  C+ PC +   D SC   C+  ++GAGFC PKLP+++NEK CCCN+
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]5.5e-2569.74Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND
        M TQ+LF  S+ V V  +CF SS++GD  WNCVIPCSNN+GDI CNTACIEQD+GAGFC+PKLP IS+ KVCCCN+
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]7.7e-1151.32Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN
        M TQ+L T SI V++I  C  S+ KGD    +CV PCS+   D SC   CI+++ GAGFC PKLP  S +K CCCN
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein2.7e-2569.74Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND
        M TQ+LF  S+ V V  +CF SS++GD  WNCVIPCSNN+GDI CNTACIEQD+GAGFC+PKLP IS+ KVCCCN+
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND

A0A0A0LHG9 Uncharacterized protein3.7e-1151.32Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN
        M TQ+L T SI V++I  C  S+ KGD    +CV PCS+   D SC   CI+++ GAGFC PKLP  S +K CCCN
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN

A0A0A0LJG5 Uncharacterized protein1.3e-1151.95Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND
        M TQ+L T SI V+VI  C +S+ KGD    +CV PC +   D SC   CI ++ GAGFC PKLP  S +K CCCND
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGF-WNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND

A0A0A0LKF5 Uncharacterized protein5.2e-0555.56Show/hide
Query:  NCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN
        +CV PCS+   D SC   CI ++ GAGFC PKLP  S +K CCCN
Subjt:  NCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCN

A0A5A7TJH1 Uncharacterized protein1.4e-1043.24Show/hide
Query:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCC
        M T++L    +A+ V+L CF++  +G G WNC+ PCS     +SC   C   ++G G CIPK P +S+E VCCC
Subjt:  MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACTCAGAGACTATTTACTACATCCATTGCTGTCATGGTCATACTTACCTGTTTTATTTCATCCGTGAAGGGAGATGGTTTCTGGAATTGTGTTATACCATGTTC
TAACAATGACGGAGATATTTCATGTAATACTGCATGCATCGAACAAGACCAAGGCGCTGGATTTTGTATTCCCAAGCTACCTAACATTTCTAATGAAAAAGTTTGTTGTT
GCAATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACTCAGAGACTATTTACTACATCCATTGCTGTCATGGTCATACTTACCTGTTTTATTTCATCCGTGAAGGGAGATGGTTTCTGGAATTGTGTTATACCATGTTC
TAACAATGACGGAGATATTTCATGTAATACTGCATGCATCGAACAAGACCAAGGCGCTGGATTTTGTATTCCCAAGCTACCTAACATTTCTAATGAAAAAGTTTGTTGTT
GCAATGACTAA
Protein sequenceShow/hide protein sequence
MGTQRLFTTSIAVMVILTCFISSVKGDGFWNCVIPCSNNDGDISCNTACIEQDQGAGFCIPKLPNISNEKVCCCND