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Lsi01G018520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description(thale cress) hypothetical protein
Genome locationchr01:19893420..19893713
RNA-Seq ExpressionLsi01G018520
SyntenyLsi01G018520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53864.2 hypothetical protein Csa_019149 [Cucumis sativus]2.0e-2774.23Show/hide
Query:  SPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGTD---IEGWVERSCKSCIDGGVPAPSLPPPEVAEEKK
        SPPN IKLDGQMQLLP+PP    EPSHSTRHS+ TL+VLLAAITILGVIARVFARLCGGGTD   IEGWV+  C SCIDG  P    PP +VAEE+K
Subjt:  SPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGTD---IEGWVERSCKSCIDGGVPAPSLPPPEVAEEKK
XP_008460761.1 PREDICTED: uncharacterized protein LOC103499518 [Cucumis melo]2.6e-2774.75Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGT-DIEGWVERSCKSCIDG-GVPAPSLPPPEVAEEKK
        M A PPN IKLDGQMQLLP+PP    EPSHSTRHS++TL+VLLAAITILGVIARVFARLC GGT DIEGWV+  C SCIDG  +PA   PP EVAEE+K
Subjt:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGT-DIEGWVERSCKSCIDG-GVPAPSLPPPEVAEEKK
XP_022928636.1 uncharacterized protein LOC111435483 [Cucurbita moschata]4.7e-2161.47Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG----------TDIEGWVERSCKSCIDGGV-PAPSLP
        MWA+       DGQMQ LPDP PAT  EPSHS + SI+TLVV+LA I ILGVIAR+ AR CGG            DIEGWVER+C+SCIDGGV   P  P
Subjt:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG----------TDIEGWVERSCKSCIDGGV-PAPSLP

Query:  PPEVAEEKK
        PPE AEEKK
Subjt:  PPEVAEEKK
XP_022967930.1 uncharacterized protein LOC111467296 [Cucurbita maxima]2.1e-2160.91Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG---------TDIEGWVERSCKSCIDGGVPAPSLPPP
        MWA+P N      QMQ LPDP PAT  EPSHS + SI+TLVV+LA I ILGVIAR+ AR CGG           DIEGWVER+C+SCIDGGV  P LPPP
Subjt:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG---------TDIEGWVERSCKSCIDGGVPAPSLPPP

Query:  ---EVAEEKK
           E A+EKK
Subjt:  ---EVAEEKK
XP_034693668.1 uncharacterized protein LOC117920325 [Vitis riparia]1.4e-2059.79Show/hide
Query:  IKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCG-------GGTDIEGWVERSCKSCIDGGVPA-PSLPPPEVAEEKK
        +++D Q+  L   PPA  EPSHST  S+ETLVV+LA ITI+GVIA + ARLCG       G  DIEGWVER C+SCIDGG+PA P  PPP  AEE K
Subjt:  IKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCG-------GGTDIEGWVERSCKSCIDGGVPA-PSLPPPEVAEEKK
TrEMBL top hitse value%identityAlignment
A0A0A0KWC6 Uncharacterized protein3.3e-2873Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGTD---IEGWVERSCKSCIDGGVPAPSLPPPEVAEEKK
        M A+PPN IKLDGQMQLLP+PP    EPSHSTRHS+ TL+VLLAAITILGVIARVFARLCGGGTD   IEGWV+  C SCIDG  P    PP +VAEE+K
Subjt:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGTD---IEGWVERSCKSCIDGGVPAPSLPPPEVAEEKK
A0A1S3CEC8 uncharacterized protein LOC1034995181.2e-2774.75Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGT-DIEGWVERSCKSCIDG-GVPAPSLPPPEVAEEKK
        M A PPN IKLDGQMQLLP+PP    EPSHSTRHS++TL+VLLAAITILGVIARVFARLC GGT DIEGWV+  C SCIDG  +PA   PP EVAEE+K
Subjt:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGT-DIEGWVERSCKSCIDG-GVPAPSLPPPEVAEEKK
A0A5A7URI4 Uncharacterized protein1.2e-2774.75Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGT-DIEGWVERSCKSCIDG-GVPAPSLPPPEVAEEKK
        M A PPN IKLDGQMQLLP+PP    EPSHSTRHS++TL+VLLAAITILGVIARVFARLC GGT DIEGWV+  C SCIDG  +PA   PP EVAEE+K
Subjt:  MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGT-DIEGWVERSCKSCIDG-GVPAPSLPPPEVAEEKK
A0A6J1EKU9 uncharacterized protein LOC1114354832.3e-2161.47Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG----------TDIEGWVERSCKSCIDGGV-PAPSLP
        MWA+       DGQMQ LPDP PAT  EPSHS + SI+TLVV+LA I ILGVIAR+ AR CGG            DIEGWVER+C+SCIDGGV   P  P
Subjt:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG----------TDIEGWVERSCKSCIDGGV-PAPSLP

Query:  PPEVAEEKK
        PPE AEEKK
Subjt:  PPEVAEEKK
A0A6J1HVS2 uncharacterized protein LOC1114672961.0e-2160.91Show/hide
Query:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG---------TDIEGWVERSCKSCIDGGVPAPSLPPP
        MWA+P N      QMQ LPDP PAT  EPSHS + SI+TLVV+LA I ILGVIAR+ AR CGG           DIEGWVER+C+SCIDGGV  P LPPP
Subjt:  MWASPPNPIKLDGQMQLLPDPPPAT-PEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGG---------TDIEGWVERSCKSCIDGGVPAPSLPPP

Query:  ---EVAEEKK
           E A+EKK
Subjt:  ---EVAEEKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57500.1 unknown protein4.2e-2052.83Show/hide
Query:  KLDGQMQLLPD----PPPATPEPSHSTRH-SIETLVVLLAAITILGVIARVFARLC-------GGGTDIEGWVERSCKSCIDGGVPA-------PSLPPP
        +LD Q+   P      PP+  +PSH++ H SIETLVV+LA ITIL V+A VFARLC       GG  DIEGWVER C+SCID G+PA       P  PPP
Subjt:  KLDGQMQLLPD----PPPATPEPSHSTRH-SIETLVVLLAAITILGVIARVFARLC-------GGGTDIEGWVERSCKSCIDGGVPA-------PSLPPP

Query:  EVAEEK
          AEE+
Subjt:  EVAEEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCATCACCACCAAATCCCATAAAGCTCGACGGTCAAATGCAGCTGCTGCCGGACCCACCGCCGGCGACGCCGGAGCCATCTCACTCCACTCGTCACTCCATCGA
GACGCTGGTGGTGCTGCTGGCGGCGATCACCATTTTGGGTGTCATTGCCCGAGTCTTTGCTCGCCTCTGTGGCGGAGGAACCGACATTGAAGGTTGGGTTGAAAGAAGTT
GCAAGAGCTGCATTGACGGCGGCGTCCCTGCTCCGTCGCTGCCGCCGCCGGAAGTGGCGGAGGAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGCATCACCACCAAATCCCATAAAGCTCGACGGTCAAATGCAGCTGCTGCCGGACCCACCGCCGGCGACGCCGGAGCCATCTCACTCCACTCGTCACTCCATCGA
GACGCTGGTGGTGCTGCTGGCGGCGATCACCATTTTGGGTGTCATTGCCCGAGTCTTTGCTCGCCTCTGTGGCGGAGGAACCGACATTGAAGGTTGGGTTGAAAGAAGTT
GCAAGAGCTGCATTGACGGCGGCGTCCCTGCTCCGTCGCTGCCGCCGCCGGAAGTGGCGGAGGAGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MWASPPNPIKLDGQMQLLPDPPPATPEPSHSTRHSIETLVVLLAAITILGVIARVFARLCGGGTDIEGWVERSCKSCIDGGVPAPSLPPPEVAEEKK