; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G018620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationchr01:20371852..20374191
RNA-Seq ExpressionLsi01G018620
SyntenyLsi01G018620
Gene Ontology termsNA
InterPro domainsIPR045026 - L10-interacting MYB domain-containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017091.1 L10-interacting MYB domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4557.75Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVV-TGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVES--TANDVDISETYTQGREKKRKKIGS
        ++PEA K+RAKGLQNVE L+ILF+DV    GGGAWAP+   V    S      +DD +G+ K+NE+E   NVES    N+V+ S TY+QG EK+RKK+  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVV-TGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVES--TANDVDISETYTQGREKKRKKIGS

Query:  ---GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
           G+ SS++ + LDRLCD IEYRRRDLP C+ LEVM+TL  LP IVEGDELY+K  +I  KRENREMFVA++KPE +I WLKQK+V
Subjt:  ---GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

XP_008436966.1 PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]1.6e-4659.56Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA
        V+PEAAK+RAKGLQNVE L+ILFK V +  GGAWA  PSQ  + K   +  + + DD +G+ K NE+E  NVES  N+V+ S TYTQ  EK+RK++ S  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA

Query:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
        GS S++ D LDRL D IEYR+RDLP C+ LEVM+TL SLP I+EGDELYMK  +I  KRENREMFVA++KP  +I WLKQK+V
Subjt:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

XP_022159819.1 L10-interacting MYB domain-containing protein-like [Momordica charantia]4.0e-5063.93Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVESTANDVDISET-YTQGREKKRKKIGS
        V+PEAAK+RA+GLQNVE L+ILFKDV V  GGAWA  PSQ  +    SD+V  + DD +G+   NE+E   NVES  N+V+ S T YTQG EKKRKK+ S
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVESTANDVDISET-YTQGREKKRKKIGS

Query:  GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKK
          GSSK+ D LDRLCD IEYRRRDLP C+ LEVMDTL  LP I+EGDELYMK  +I  KRENREMFVA++KPE +I WLKQK+
Subjt:  GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKK

XP_022929169.1 L10-interacting MYB domain-containing protein-like [Cucurbita moschata]4.6e-4658.29Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVV-TGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVES--TANDVDISETYTQGREKKRKKIGS
        ++PEA K+RAKGLQNVE L+ILF+DV    GGGAWAP+   V    S      +DD +G+ K+NE+E   NVES    N+V+ S TY+QG EK+RKK+  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVV-TGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVES--TANDVDISETYTQGREKKRKKIGS

Query:  ---GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
           G+ SS++ + LDRLCD IEYRRRDLP C+ LEVM+TL  LP IVEGDELYMK  +I  KRENREMFVA++KPE +I WLKQK+V
Subjt:  ---GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

XP_038874429.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida]4.5e-4962.22Show/hide
Query:  VPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGAGS-
        +PEAAK+RAKGLQNVE L+ILFKDV V+ GGAWA  PSQ  + K  SD +  + DD  G+ K N   NVES  N+V+ S TYTQG EK+RKK+ S  GS 
Subjt:  VPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGAGS-

Query:  SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
         ++   LDRLCDVIEYRRRDLP C+ LEVM+TL  LP I+EGDELYMK  +I  KRENREMFVA++KP  +I WLKQK+V
Subjt:  SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

TrEMBL top hitse value%identityAlignment
A0A0A0KKV6 Myb_DNA-bind_3 domain-containing protein2.5e-4557.92Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA
        V+PEAAK+RAKGLQ++E L+ILFK V +  GGAWA  PSQ  + K   +    + +D +G+ K NE+E  NVES  N+V+ S T+TQ  EK+RK++ S  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA

Query:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
        GS S++ D LDRL DVIEYR+RDLP C+ LEVM+TL SLP I+EGDELYMK  +I  KRENREMFVA++KP  +I WLKQK+V
Subjt:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

A0A1S3AT15 L10-interacting MYB domain-containing protein-like7.7e-4759.56Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA
        V+PEAAK+RAKGLQNVE L+ILFK V +  GGAWA  PSQ  + K   +  + + DD +G+ K NE+E  NVES  N+V+ S TYTQ  EK+RK++ S  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA

Query:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
        GS S++ D LDRL D IEYR+RDLP C+ LEVM+TL SLP I+EGDELYMK  +I  KRENREMFVA++KP  +I WLKQK+V
Subjt:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

A0A5A7UN70 L10-interacting MYB domain-containing protein-like7.7e-4759.56Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA
        V+PEAAK+RAKGLQNVE L+ILFK V +  GGAWA  PSQ  + K   +  + + DD +G+ K NE+E  NVES  N+V+ S TYTQ  EK+RK++ S  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE--NVESTANDVDISETYTQGREKKRKKIGSGA

Query:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
        GS S++ D LDRL D IEYR+RDLP C+ LEVM+TL SLP I+EGDELYMK  +I  KRENREMFVA++KP  +I WLKQK+V
Subjt:  GS-SKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

A0A6J1DZU8 L10-interacting MYB domain-containing protein-like2.0e-5063.93Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVESTANDVDISET-YTQGREKKRKKIGS
        V+PEAAK+RA+GLQNVE L+ILFKDV V  GGAWA  PSQ  +    SD+V  + DD +G+   NE+E   NVES  N+V+ S T YTQG EKKRKK+ S
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWA--PSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVESTANDVDISET-YTQGREKKRKKIGS

Query:  GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKK
          GSSK+ D LDRLCD IEYRRRDLP C+ LEVMDTL  LP I+EGDELYMK  +I  KRENREMFVA++KPE +I WLKQK+
Subjt:  GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKK

A0A6J1EN01 L10-interacting MYB domain-containing protein-like2.2e-4658.29Show/hide
Query:  VVPEAAKYRAKGLQNVEQLDILFKDVVV-TGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVES--TANDVDISETYTQGREKKRKKIGS
        ++PEA K+RAKGLQNVE L+ILF+DV    GGGAWAP+   V    S      +DD +G+ K+NE+E   NVES    N+V+ S TY+QG EK+RKK+  
Subjt:  VVPEAAKYRAKGLQNVEQLDILFKDVVV-TGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESE---NVES--TANDVDISETYTQGREKKRKKIGS

Query:  ---GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV
           G+ SS++ + LDRLCD IEYRRRDLP C+ LEVM+TL  LP IVEGDELYMK  +I  KRENREMFVA++KPE +I WLKQK+V
Subjt:  ---GAGSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV

SwissProt top hitse value%identityAlignment
Q9FFJ8 L10-interacting MYB domain-containing protein2.2e-0625.7Show/hide
Query:  PEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQG----FVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGA--
        P A ++R K + + +QL I+F  V+  G     PS+       ++  S + R  T   + ++ V+E+E              Y + +E +     +    
Subjt:  PEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQG----FVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGA--

Query:  GSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQ
            M+D + +   V        P  +I E + +L ++ E+ +G ELYM   ++F KRE RE+F+ +KKP  +I WL++
Subjt:  GSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQ

Arabidopsis top hitse value%identityAlignment
AT5G05800.1 unknown protein1.5e-0725.7Show/hide
Query:  PEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQG----FVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGA--
        P A ++R K + + +QL I+F  V+  G     PS+       ++  S + R  T   + ++ V+E+E              Y + +E +     +    
Subjt:  PEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQG----FVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGA--

Query:  GSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQ
            M+D + +   V        P  +I E + +L ++ E+ +G ELYM   ++F KRE RE+F+ +KKP  +I WL++
Subjt:  GSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQ

AT5G05800.2 unknown protein1.5e-0725.7Show/hide
Query:  PEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQG----FVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGA--
        P A ++R K + + +QL I+F  V+  G     PS+       ++  S + R  T   + ++ V+E+E              Y + +E +     +    
Subjt:  PEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQG----FVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGA--

Query:  GSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQ
            M+D + +   V        P  +I E + +L ++ E+ +G ELYM   ++F KRE RE+F+ +KKP  +I WL++
Subjt:  GSSKMSDKLDRLCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTAGTCGTTCCTGAGGCAGCGAAATATCGTGCAAAAGGGTTACAAAATGTAGAACAGTTAGACATTCTTTTCAAAGATGTTGTAGTAACTGGAGGAGGAGCATG
GGCTCCATCTCAAGGTTTTGTATCTAAGTTTGTAAGTGATAGAGTTAGAGGTTTTACAGATGATATAGTAGGAGAGATAAAGGTCAATGAGAGTGAAAATGTTGAAAGTA
CGGCCAATGACGTTGATATAAGTGAAACTTATACTCAAGGGAGAGAGAAAAAGAGGAAAAAAATTGGTTCAGGAGCTGGATCTTCCAAGATGTCAGACAAATTAGATCGT
TTGTGTGATGTTATCGAGTACAGAAGAAGAGATTTGCCGAGATGCAACATTCTTGAAGTAATGGATACTTTAACGAGCTTGCCTGAGATTGTAGAAGGTGACGAGTTGTA
TATGAAGACTACTGAAATTTTTACCAAAAGAGAAAATAGAGAAATGTTCGTTGCGATAAAGAAGCCTGAAACAAAAATTGAATGGCTTAAGCAAAAAAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTAGTCGTTCCTGAGGCAGCGAAATATCGTGCAAAAGGGTTACAAAATGTAGAACAGTTAGACATTCTTTTCAAAGATGTTGTAGTAACTGGAGGAGGAGCATG
GGCTCCATCTCAAGGTTTTGTATCTAAGTTTGTAAGTGATAGAGTTAGAGGTTTTACAGATGATATAGTAGGAGAGATAAAGGTCAATGAGAGTGAAAATGTTGAAAGTA
CGGCCAATGACGTTGATATAAGTGAAACTTATACTCAAGGGAGAGAGAAAAAGAGGAAAAAAATTGGTTCAGGAGCTGGATCTTCCAAGATGTCAGACAAATTAGATCGT
TTGTGTGATGTTATCGAGTACAGAAGAAGAGATTTGCCGAGATGCAACATTCTTGAAGTAATGGATACTTTAACGAGCTTGCCTGAGATTGTAGAAGGTGACGAGTTGTA
TATGAAGACTACTGAAATTTTTACCAAAAGAGAAAATAGAGAAATGTTCGTTGCGATAAAGAAGCCTGAAACAAAAATTGAATGGCTTAAGCAAAAAAAAGTTTAACATT
GATACTTTTTGGTATTTAGGTCTTTTAGGTGTGAACTTCCTTGGATAAAAAAAGCTAGAAAAGTTTGTTCAATCTTGTATTTGTTAACTGGAATTGAGTTTAATCCTCCA
TTTGTTGTTTCGTTTTCGTGAACTATTGATTGTGTTTAACTGTGTTTATGGTTGATAATGGTGATATTATTGGTTGAGGGTGTTTGGATTGTATATAATTGTGCTTATGG
TTGATTGTGTTTTTTTTTGTTAACAGAAATGTCGTCTGATATGATTGATAATGATGATACTAATAGCTCTTTAGACGATTGTGACGATGAAGATTATGACCATTTAGTTG
AAATTGGATGTACAATGGTTGTGAGTCATTTCCAAAAATATGTTGATAAAGAACCATGCAGGACTTCATTTCACACAGGTTTCAAGTTTGTTTGAGAGGTTTTAAATGGT
CATGATGTTAGGTGTCATCAACAATTTAGGATGGAAAAACACGTGTTTACTCAATTATTGATGACACTTAATCAAAATTATGACCTCAAAAGTAGTTCAGATGTGCCAAT
GGAAGAAGCTCTAGCTATGTTCCTTATCACATTAGGGCATGGTTTAACTAATAGAATGATTCAAGAAAGGTTTCAACACTCAGGTCTGTTTCTAGATGGTTTGGTTTGGT
ATTAGATGTTGTTTGTCATTTAGCTACGGACATCATTAAACCAAGTGATCTGCAATTCAGAGCAATTCCAAGTAAAATTAGAAGTGATGATCGATATTGGCCATACTCTA
AAAATTGCATAGGAGCAATTGATGGCACCCATATATCAGTTGTTCCTCCTAAAGATAAACAAATACCATATATTGGTAGAAAAGGTATTGCTACCCAAAATGTTATGGCC
GTATGTGATTTTAATATGTGCTTCACTTTTACTTGGGCTGGTTGGGAAGGTGCTGCTCATGACTCACGTATCTTCATGGAAGCTTTATAAAGGCCTCATTTAAATTTTCC
TCATCCACCTAAAGGTAAATATTATCTCGTTGATGTCGGATATCCACAAATGAAAGGATATCTAGGCCCTTATAAAGGCGAAAGATATCACCTTCCTGATTTTCGTCGTG
GGAGTCAACCAAGAGGTAAGAAGGAAATATTTAACCATAGACATTCATCTTTAAGGTGTACAATTGAGAGGACATTTGGTGTTTGGAAAAATAGATGGAAAATGTTACGC
CATATGCATAGTTTTCCTTTTGATAAACAAGTGAAGGTTGTTGTTGCATCAATGGCACTTCATAATTTTGTACGAACTCATTCTACAACTGACTTTGAGTTCAAGCTTTT
TGACGATGACGAAGATTTTCTCCCTTCAAGTGATGACCGAAATGAGTTGAGTGTTGCTGAAGAAAGTGAAATTTCTTGTCATGGAAGGGAGATGGAAGAGGAGTGGGAGA
AAATTGCAAGACTTCTTATATCTCGTTAATGTTTTTGTTATACAGTTTGTATTTCAATAGATAATATCTAGTTTAAGTATTTTGTAATGATACAAAGATTTCTAGATTGG
ATGAGATACATGTTTTGAATTTTCTTTTGTTTTTATTATGTATATTTTTCTT
Protein sequenceShow/hide protein sequence
MQLVVPEAAKYRAKGLQNVEQLDILFKDVVVTGGGAWAPSQGFVSKFVSDRVRGFTDDIVGEIKVNESENVESTANDVDISETYTQGREKKRKKIGSGAGSSKMSDKLDR
LCDVIEYRRRDLPRCNILEVMDTLTSLPEIVEGDELYMKTTEIFTKRENREMFVAIKKPETKIEWLKQKKV