; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G018770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr01:21286555..21292975
RNA-Seq ExpressionLsi01G018770
SyntenyLsi01G018770
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]6.5e-10072.66Show/hide
Query:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA
        MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K LV +        +P    +     I+ +GV  TLP+KSRD 
Subjt:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA

Query:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
        S VLP MNNEHYHASTSQSEL++LSMT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+
Subjt:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAEA++ +DD DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Subjt:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]1.0e-10074.91Show/hide
Query:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA
        MMSSEI+  NRPDCD QQ TNYT  NSQ  +    +HGG +T A MSKEEK N AW K LV +         PV   +     I+ +GVESTLP+KSRD 
Subjt:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA

Query:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
        S VLPLMNNEHYHASTSQ EL+TLSMT  TSY YHD SYGGL SP  FQTMHNS+YS MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
Subjt:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSM-DDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        ISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK EA+TS+ DD DGEG NISLGSESMCNGS+CYQG SQLHLSAYI
Subjt:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSM-DDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]5.7e-8868.64Show/hide
Query:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST
        MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N AW K LV +       P P      + T IS    G  + 
Subjt:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST

Query:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS
         P+KSRDASI+LPLMNNEH  ASTS SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYVNAKQYHGILRRRQS
Subjt:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS

Query:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        RAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Subjt:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

XP_022151661.1 nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]5.7e-8868.64Show/hide
Query:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST
        MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N AW K LV +       P P      + T IS    G  + 
Subjt:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST

Query:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS
         P+KSRDASI+LPLMNNEH  ASTS SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYVNAKQYHGILRRRQS
Subjt:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS

Query:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        RAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Subjt:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]6.5e-10072.66Show/hide
Query:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA
        MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K LV +        +P    +     I+ +GV  TLP+KSRD 
Subjt:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA

Query:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
        S VLP MNNEHYHASTSQSEL++LSMT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+
Subjt:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAEA++ +DD DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Subjt:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit3.2e-10072.66Show/hide
Query:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA
        MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K LV +        +P    +     I+ +GV  TLP+KSRD 
Subjt:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA

Query:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
        S VLP MNNEHYHASTSQSEL++LSMT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+
Subjt:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAEA++ +DD DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Subjt:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit4.9e-10174.91Show/hide
Query:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA
        MMSSEI+  NRPDCD QQ TNYT  NSQ  +    +HGG +T A MSKEEK N AW K LV +         PV   +     I+ +GVESTLP+KSRD 
Subjt:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDA

Query:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
        S VLPLMNNEHYHASTSQ EL+TLSMT  TSY YHD SYGGL SP  FQTMHNS+YS MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR
Subjt:  SIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSM-DDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        ISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK EA+TS+ DD DGEG NISLGSESMCNGS+CYQG SQLHLSAYI
Subjt:  ISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSM-DDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit2.8e-8868.64Show/hide
Query:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST
        MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N AW K LV +       P P      + T IS    G  + 
Subjt:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST

Query:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS
         P+KSRDASI+LPLMNNEH  ASTS SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYVNAKQYHGILRRRQS
Subjt:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS

Query:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        RAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Subjt:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit2.8e-8868.64Show/hide
Query:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST
        MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N AW K LV +       P P      + T IS    G  + 
Subjt:  MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWIS--NNGVEST

Query:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS
         P+KSRDASI+LPLMNNEH  ASTS SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYVNAKQYHGILRRRQS
Subjt:  LPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS

Query:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        RAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Subjt:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit4.5e-6257.35Show/hide
Query:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDV-STWISNNGVESTLPHKSRD
        MMSS+ DYR  PD            N Q   W     G  TTIA+ SKE+K N  W   LV N       P+P     +V  T       ES +  +S+D
Subjt:  MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDV-STWISNNGVESTLPHKSRD

Query:  ASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN
        ASIVLPLMNNEHYHAST +        T  TSY Y+D+ YG LM P GFQT+HNSEY+     RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV N
Subjt:  ASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN

Query:  RISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI
        +ISRSQ+KPYLHESRHLHAMRRERGC GRFVSKKK  E   SM D DG+G N+S         S+CYQG S+LHLSAYI
Subjt:  RISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-77.9e-2441.3Show/hide
Query:  NNGVESTLPHKSRDASIVLPLMNNEHYHASTS----QSELVTLSMTPGTSYVYHDLSYGGLMS--PLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNA
        ++ + S    + RD+    P+ +  +Y +  +         T SM PG  Y Y D  Y  + +  P  +  +H     +  QG + LP    EEPV+VNA
Subjt:  NNGVESTLPHKSRDASIVLPLMNNEHYHASTS----QSELVTLSMTPGTSYVYHDLSYGGLMS--PLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNA

Query:  KQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS
        KQYHGILRRRQSRA+ E +N++ +S RKPYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E  N+S G  +M   S
Subjt:  KQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS

Q8VY64 Nuclear transcription factor Y subunit A-42.6e-1952.14Show/hide
Query:  MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK-----KAEATTSMDDGDGEGCNIS
        M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA+RR RGCGGRF++ KK     K E   + D+   E  + S
Subjt:  MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK-----KAEATTSMDDGDGEGCNIS

Query:  LGSESMCNGSSCYQGCS
        L SE +   +S   G S
Subjt:  LGSESMCNGSSCYQGCS

Q93ZH2 Nuclear transcription factor Y subunit A-36.9e-2052.34Show/hide
Query:  SYVYHDLSYGGLMSP--LGFQTMHNSEYSIMAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGG
        S+ Y D  YGGL++   L      N +   M  GR+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG GG
Subjt:  SYVYHDLSYGGLMSP--LGFQTMHNSEYSIMAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGG

Query:  RFVSKKK
        RF++ KK
Subjt:  RFVSKKK

Q945M9 Nuclear transcription factor Y subunit A-96.7e-2349.29Show/hide
Query:  NNEHYHASTSQ----SELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISR
        N E  H   +Q     +LV  ++   +S  Y D  Y G+M   G   +    Y  M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +
Subjt:  NNEHYHASTSQ----SELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISR

Query:  SQRKPYLHESRHLHAMRRERGCGGRFVSK------KKKAE
        S RKPYLHESRH HAMRR RG GGRF  K      K+KAE
Subjt:  SQRKPYLHESRHLHAMRRERGCGGRFVSK------KKKAE

Q9LXV5 Nuclear transcription factor Y subunit A-12.7e-2445.05Show/hide
Query:  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELV--TLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQ
        + N+G+E   P  S         + N H        ELV   ++  P     Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQ
Subjt:  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELV--TLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQ

Query:  YHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS
        Y GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF    KK+E     D G   G +   GS +  +GS
Subjt:  YHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS

Arabidopsis top hitse value%identityAlignment
AT1G30500.2 nuclear factor Y, subunit A75.6e-2541.3Show/hide
Query:  NNGVESTLPHKSRDASIVLPLMNNEHYHASTS----QSELVTLSMTPGTSYVYHDLSYGGLMS--PLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNA
        ++ + S    + RD+    P+ +  +Y +  +         T SM PG  Y Y D  Y  + +  P  +  +H     +  QG + LP    EEPV+VNA
Subjt:  NNGVESTLPHKSRDASIVLPLMNNEHYHASTS----QSELVTLSMTPGTSYVYHDLSYGGLMS--PLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNA

Query:  KQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS
        KQYHGILRRRQSRA+ E +N++ +S RKPYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E  N+S G  +M   S
Subjt:  KQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS

AT5G12840.1 nuclear factor Y, subunit A11.9e-2545.05Show/hide
Query:  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELV--TLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQ
        + N+G+E   P  S         + N H        ELV   ++  P     Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQ
Subjt:  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELV--TLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQ

Query:  YHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS
        Y GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF    KK+E     D G   G +   GS +  +GS
Subjt:  YHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS

AT5G12840.2 nuclear factor Y, subunit A11.9e-2554.62Show/hide
Query:  YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKK
        Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF    
Subjt:  YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKK

Query:  KKAEATTSMDDGDGEGCNISLGSESMCNGS
        KK+E     D G   G +   GS +  +GS
Subjt:  KKAEATTSMDDGDGEGCNISLGSESMCNGS

AT5G12840.3 nuclear factor Y, subunit A11.9e-2545.05Show/hide
Query:  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELV--TLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQ
        + N+G+E   P  S         + N H        ELV   ++  P     Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQ
Subjt:  ISNNGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELV--TLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQ

Query:  YHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS
        Y GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF    KK+E     D G   G +   GS +  +GS
Subjt:  YHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS

AT5G12840.4 nuclear factor Y, subunit A11.9e-2554.62Show/hide
Query:  YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKK
        Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF    
Subjt:  YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKK

Query:  KKAEATTSMDDGDGEGCNISLGSESMCNGS
        KK+E     D G   G +   GS +  +GS
Subjt:  KKAEATTSMDDGDGEGCNISLGSESMCNGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACA
CGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAACACCGGGTACATCATACGTATACCACGACCTG
TCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAA
CACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGG
ATTTCAAACAATGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATG
GAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCCTATCTTCACGAATCGAGACATCTACACGCAATGAGA
AGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGA
ATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACA
CGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAACACCGGGTACATCATACGTATACCACGACCTG
TCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAA
CACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGG
ATTTCAAACAATGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATG
GAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCCTATCTTCACGAATCGAGACATCTACACGCAATGAGA
AGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGA
ATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGATTGGGTTAGGTGCTTTGGCTTTGGGAACGACTTCTCCCTCCTT
TTCTTCATCTATTTGGAAGATGAACACAAAAGTGTTAGGACCCAATCTATAATATATATATATTGTATATTTAATCTTTTTAGTTTAAGAGTTTTCTGGTTGAGTGATAT
ATATATTATATTGTTGGTTTTTTCTTT
Protein sequenceShow/hide protein sequence
MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGNTGYIIRIPRPVVWRTDVSTWISNNGVESTLPHKSRDASIVLPLMNNE
HYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMR
RERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI