; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G018790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L6
Genome locationchr01:21418528..21420841
RNA-Seq ExpressionLsi01G018790
SyntenyLsi01G018790
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149609.1 60S ribosomal protein L6-2 [Cucumis sativus]1.1e-11696.54Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEK PKFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLKA MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

XP_008461779.1 PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]4.1e-11696.1Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEK PKFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLKA MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

XP_022935449.1 60S ribosomal protein L6-1-like [Cucurbita moschata]6.4e-11796.54Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEK PKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLK+ MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

XP_023528566.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]7.0e-11695.67Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEK PKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLK+ MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

XP_038880885.1 60S ribosomal protein L6-1-like [Benincasa hispida]2.9e-11797.84Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEK PKFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQL SGLLLVTGPFK NGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAVADLKTYLAARFSLKA MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0L9J7 60S ribosomal protein L65.3e-11796.54Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEK PKFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLKA MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

A0A1S3CFY6 60S ribosomal protein L62.0e-11696.1Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEK PKFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLKA MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

A0A5D3CKB9 60S ribosomal protein L62.0e-11696.1Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEK PKFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLKA MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

A0A6J1F5G0 60S ribosomal protein L63.1e-11796.54Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEK PKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+DLKTYLAARFSLK+ MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

A0A6J1J7G9 60S ribosomal protein L63.4e-11696.1Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEK PKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFK NGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSAL

Query:  LKSIEAVADLKTYLAARFSLKASMKPHELVF
        LKSIEAV+ LKTYLAARFSLK+ MKPHELVF
Subjt:  LKSIEAVADLKTYLAARFSLKASMKPHELVF

SwissProt top hitse value%identityAlignment
P21533 60S ribosomal protein L61.6e-4648.59Show/hide
Query:  SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD--------------------APAEKSPKFYPADDVKKPLVNKRKAKP-----TKL
        SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +                        K P++YP +DV + L++  K KP      +L
Subjt:  SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD--------------------APAEKSPKFYPADDVKKPLVNKRKAKP-----TKL

Query:  RSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FDDKYFSKEVQKKKKKGEGEFFEAEKEEK
        RSSITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP   N VPLRR +Q +VIATSTKVDI+ V + K   D YF K+  +K +  EGE F+ EK EK
Subjt:  RSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FDDKYFSKEVQKKKKKGEGEFFEAEKEEK

Query:  SALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSLKASMKPHELVF
          + + +K DQKAVDS +L  I+AV  L+ YL ++FSL   M PH+LVF
Subjt:  SALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSLKASMKPHELVF

P34091 60S ribosomal protein L62.4e-9882.14Show/hide
Query:  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVF
        VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EK PKFYPADDVKKPL+NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVF
Subjt:  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVF

Query:  LKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAV
        LKQL SGLLLVTGPFK NGVPLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ+KKDDQKAVD ALLK+IE V
Subjt:  LKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAV

Query:  ADLKTYLAARFSLKASMKPHELVF
         +LK YL ARFSLKA MKPHELVF
Subjt:  ADLKTYLAARFSLKASMKPHELVF

Q9C9C5 60S ribosomal protein L6-36.6e-10182.46Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS

Query:  IEAVADLKTYLAARFSLKASMKPHELVF
        IEAV +LKTYL ARFSLK  MKPHELVF
Subjt:  IEAVADLKTYLAARFSLKASMKPHELVF

Q9C9C6 60S ribosomal protein L6-23.9e-10182.46Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS

Query:  IEAVADLKTYLAARFSLKASMKPHELVF
        IEAV +LKTYL ARFSLK  MKPHELVF
Subjt:  IEAVADLKTYLAARFSLKASMKPHELVF

Q9FZ76 60S ribosomal protein L6-16.6e-10180.87Show/hide
Query:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EK  KFYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALL
        GKRVVFLKQL SGLLLVTGPFK NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ+KK+DQK VD+AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALL

Query:  KSIEAVADLKTYLAARFSLKASMKPHELVF
        KSIEAV +LK YL ARFSL   MKPHELVF
Subjt:  KSIEAVADLKTYLAARFSLKASMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein4.7e-10280.87Show/hide
Query:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EK  KFYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALL
        GKRVVFLKQL SGLLLVTGPFK NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ+KK+DQK VD+AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALL

Query:  KSIEAVADLKTYLAARFSLKASMKPHELVF
        KSIEAV +LK YL ARFSL   MKPHELVF
Subjt:  KSIEAVADLKTYLAARFSLKASMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein4.7e-10282.46Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS

Query:  IEAVADLKTYLAARFSLKASMKPHELVF
        IEAV +LKTYL ARFSLK  MKPHELVF
Subjt:  IEAVADLKTYLAARFSLKASMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein2.8e-10282.46Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKS

Query:  IEAVADLKTYLAARFSLKASMKPHELVF
        IEAV +LKTYL ARFSLK  MKPHELVF
Subjt:  IEAVADLKTYLAARFSLKASMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCAAGGTCGAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGC
CAAAAACGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCTGATGCTCCAGCAGAGAAGTCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTA
ACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGGGTTGTGTTCTTAAAGCAA
CTTCCATCTGGGTTGCTTTTAGTGACTGGGCCATTCAAGTTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCCTACGTGATTGCAACTTCCACTAAGGTGGACATTGC
AGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTG
CACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATCGAGGCAGTCGCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTA
AAGGCAAGCATGAAACCGCACGAGCTTGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
TATATATTTGTCTACATCTCGGTAACCCTAGAGCTTCTCGGCGAGTGGAGGAGCGGAGACGACGCTGCCAAATTCTCAGAAATTCATCAATGGCTCCGAAGACAGCAAGA
GTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCAAGGTCGAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAACGGAGGTGTTTTCCC
TCGCCACGATGCCAAGCCTAAGGCTGATGCTCCAGCAGAGAAGTCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCA
CCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGGGTTGTGTTCTTAAAGCAACTTCCATCTGGGTTGCTTTTA
GTGACTGGGCCATTCAAGTTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCCTACGTGATTGCAACTTCCACTAAGGTGGACATTGCAGGAGTCAATGTGGAGAAGTT
TGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCACTCCCACAAGACAAAAAGG
ATGATCAGAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATCGAGGCAGTCGCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAAGCATGAAACCGCAC
GAGCTTGTTTTCTAGATATTTTCTCTTTGGCGCTGATACTTTTCTTGTGGAATTATTTGATCCCTACAATCTTCTTGTTCATGTTTTGTTATGAGGATTCTAGATTTGAA
ATTATGTCTCGCAATGAATTTTGTAGTGAAGTCTTCATCAAATCCCGCGTTACGTAGCTTTCTTTGACTACTGATAGTGTTAAGATCTGTAATTTTTATTCAATTGCTGT
CTGGTGAAATACTCAAGAGAGAAACATTTGAAAAGATAGATATGGGACTTCACATTTTGCATAGCTATGCTTGATTAGTTTGCAACGAGATACTGTGTGGGCAATGTATG
CTTGAGTCTCAAATATTTGGGGTTTCTTTTTCAATTGGATTAGAAAATGATCTTTTCAAAGTCT
Protein sequenceShow/hide protein sequence
MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQ
LPSGLLLVTGPFKFNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSL
KASMKPHELVF