CuGenDBv2

Gene ID	Lsi01G018920
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein POLYCHOME
Genome location	chr01:21862943..21866244
RNA-Seq Expression	Lsi01G018920
Synteny	Lsi01G018920
Gene Ontology terms	GO:0051783 - regulation of nuclear division (biological process) GO:1904667 - negative regulation of ubiquitin protein ligase activity (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR034590 - POLYCHOME/GIGAS CELL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595661.1 Ras-related protein RABA4d, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-103

83.98

Show/hide

Query:  SIMSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPN----LRRTFGSPISGGIGRNRHLYRSPVLNRE
        SIMSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGT IAR TTTTTAQQRPTN  PGGGG       RR+FGSPISGGIGRNR LYRSPVL+RE
Subjt:  SIMSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPN----LRRTFGSPISGGIGRNRHLYRSPVLNRE

Query:  NTAAGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIA
        NTAAGSSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KIL GIA
Subjt:  NTAAGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIA

Query:  NQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        N+N   +E LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+AEREKRVRTLMSFR
Subjt:  NQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

KGN53824.1 hypothetical protein Csa_015343 [Cucumis sativus]

2.0e-129

81.23

Show/hide

Query:  MSLSSAQIFAFEICPKFRLLSKQLHLLPSHFSTARLTEESASHQSTAISFGQRLNKYSIEAHWNLT-----VFFSIMSEARDRLERQVDHAEVFARRRSE
        MSLSSAQIF F+ICPKFRLLS QLHLLPSHFS+  LT+           F            WN       +  SIMSEARDRLERQVD+AEVFARRRSE
Subjt:  MSLSSAQIFAFEICPKFRLLSKQLHLLPSHFSTARLTEESASHQSTAISFGQRLNKYSIEAHWNLT-----VFFSIMSEARDRLERQVDHAEVFARRRSE

Query:  GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSSRRNRSRGRNSVLPIWYPRTPLRDI
        GILDEQEM S+LIGT IAR TTT TAQQRPTNP PGGGG NLRRTFGSPISGGIGRNR LYR+PVL+REN +AGSSRR+RSRGRNSVLPIWYPRTPLRDI
Subjt:  GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSSRRNRSRGRNSVLPIWYPRTPLRDI

Query:  TAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEEL
        TAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKIL GIAN+NTVGAE LTPQKKLLNSIDKVEKVVMEEL
Subjt:  TAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEEL

Query:  QKLKRTPSAKKAEREKRVRTLMSFR
        QKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  QKLKRTPSAKKAEREKRVRTLMSFR

XP_004150162.1 protein POLYCHOME [Cucumis sativus]

8.2e-115

91.57

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGT IAR TTT TAQQRPTNP PGGGG NLRRTFGSPISGGIGRNR LYR+PVL+REN +AGSS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKIL GIAN+NTVGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        E LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

XP_008460799.1 PREDICTED: protein POLYCHOME [Cucumis melo]

1.7e-115

91.97

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGT IAR TTTT AQQRPTNP PGGGG NLRRTFGSPISGGIGRNR LYR+PVL+REN +AGSS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKIL GIAN+NTVGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

XP_038881398.1 protein POLYCHOME [Benincasa hispida]

1.7e-120

95.58

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS
        MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGT IAR TTTTTAQQRPTNP PGGGG NLRR FGSPISGGIGRNR LYRSPVLNRENTAAGSS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA
        RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEY+V VAGDHQEPSISLVTPKPTVGKV KIL GIAN+NTVGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY99 Uncharacterized protein

9.8e-130

81.23

Show/hide

Query:  MSLSSAQIFAFEICPKFRLLSKQLHLLPSHFSTARLTEESASHQSTAISFGQRLNKYSIEAHWNLT-----VFFSIMSEARDRLERQVDHAEVFARRRSE
        MSLSSAQIF F+ICPKFRLLS QLHLLPSHFS+  LT+           F            WN       +  SIMSEARDRLERQVD+AEVFARRRSE
Subjt:  MSLSSAQIFAFEICPKFRLLSKQLHLLPSHFSTARLTEESASHQSTAISFGQRLNKYSIEAHWNLT-----VFFSIMSEARDRLERQVDHAEVFARRRSE

Query:  GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSSRRNRSRGRNSVLPIWYPRTPLRDI
        GILDEQEM S+LIGT IAR TTT TAQQRPTNP PGGGG NLRRTFGSPISGGIGRNR LYR+PVL+REN +AGSSRR+RSRGRNSVLPIWYPRTPLRDI
Subjt:  GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSSRRNRSRGRNSVLPIWYPRTPLRDI

Query:  TAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEEL
        TAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKIL GIAN+NTVGAE LTPQKKLLNSIDKVEKVVMEEL
Subjt:  TAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEEL

Query:  QKLKRTPSAKKAEREKRVRTLMSFR
        QKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  QKLKRTPSAKKAEREKRVRTLMSFR

A0A1S3CDA1 protein POLYCHOME

8.0e-116

91.97

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGT IAR TTTT AQQRPTNP PGGGG NLRRTFGSPISGGIGRNR LYR+PVL+REN +AGSS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKIL GIAN+NTVGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

A0A5D3BM43 Protein POLYCHOME

8.0e-116

91.97

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGT IAR TTTT AQQRPTNP PGGGG NLRRTFGSPISGGIGRNR LYR+PVL+REN +AGSS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKIL GIAN+NTVGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

A0A6J1EBD1 protein POLYCHOME-like

1.3e-102

84.19

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPN---LRRTFGSPISGGIGRNRHLYRSPVLNRENTA
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGT IAR TTTTTAQQRPTN  PGGGG      RR+FGSPISGGIGRNR LYRSPVL+RENTA
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPN---LRRTFGSPISGGIGRNRHLYRSPVLNRENTA

Query:  AGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQN
        AGSSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KIL GIAN+N
Subjt:  AGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQN

Query:  TVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
           +E LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+AEREKRVRTLMSFR
Subjt:  TVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

A0A6J1HRM8 protein POLYCHOME

1.3e-102

83.86

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPN----LRRTFGSPISGGIGRNRHLYRSPVLNRENT
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGT IAR TTTTTAQQRPTN  PGGGG       RR+FGSPISGGIGRNR LYRSPVL+RENT
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTQIAR-TTTTTAQQRPTNPSPGGGGPN----LRRTFGSPISGGIGRNRHLYRSPVLNRENT

Query:  AAGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQ
        AAGSSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KIL GIAN+
Subjt:  AAGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQ

Query:  NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        N   +E LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+AEREKRVRTLMSFR
Subjt:  NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

SwissProt top hits

e value

%identity

Alignment

O48533 Protein POLYCHOME

8.7e-51

51.91

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIAR--TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAG
        M EARDR+ERQVD+   F  RRS GI LDE     +L G+ + R  +  T         S  G G  +R  FG   +GG  R +  +RSP   REN + G
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIAR--TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAG

Query:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK
         +RR R+R  NSVLP WYPRTPLRDI+AVVRAIER RAR+   EG G D  +P P     L+  V ++G H E   S+VTP P++G          KV +
Subjt:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK

Query:  ILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        ILL I  +NT   + LTP+KKLLNSIDKVEKVVMEE+QK+K TPSAK+AEREKRVRTLMS R
Subjt:  ILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

Q9M2R1 Protein GIGAS CELL1

8.8e-35

45.15

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIARTTTTTAQQRPTNPSPG--GGGPNLRRTFGSPISGGIGRNRHL-YRSPVLNRENTAA
        M EARDR ER VD++ +FA RR  GI LDE +    LI             + P NP  G  GG   L R   +    G GR  H  +R P   REN   
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIARTTTTTAQQRPTNPSPG--GGGPNLRRTFGSPISGGIGRNRHL-YRSPVLNRENTAA

Query:  GSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG---------
         ++RR R  G   +LP WYPRTPLRDIT +VRAIER     R   G G D+      P       LE  V ++G+H+    S+VTP P+VG         
Subjt:  GSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG---------

Query:  -KVPKILLGIANQ-NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
         KV K+LL I  +     A  +TP+KKLLNSIDKVEK+VM E+QKLK TP AK+ EREKRVRTLM+ R
Subjt:  -KVPKILLGIANQ-NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

Arabidopsis top hits

e value

%identity

Alignment

AT2G42260.1 uv-b-insensitive 4

6.2e-52

51.91

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIAR--TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAG
        M EARDR+ERQVD+   F  RRS GI LDE     +L G+ + R  +  T         S  G G  +R  FG   +GG  R +  +RSP   REN + G
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIAR--TTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAG

Query:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK
         +RR R+R  NSVLP WYPRTPLRDI+AVVRAIER RAR+   EG G D  +P P     L+  V ++G H E   S+VTP P++G          KV +
Subjt:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK

Query:  ILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
        ILL I  +NT   + LTP+KKLLNSIDKVEKVVMEE+QK+K TPSAK+AEREKRVRTLMS R
Subjt:  ILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

AT3G57860.1 UV-B-insensitive 4-like

6.2e-36

45.15

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIARTTTTTAQQRPTNPSPG--GGGPNLRRTFGSPISGGIGRNRHL-YRSPVLNRENTAA
        M EARDR ER VD++ +FA RR  GI LDE +    LI             + P NP  G  GG   L R   +    G GR  H  +R P   REN   
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTQIARTTTTTAQQRPTNPSPG--GGGPNLRRTFGSPISGGIGRNRHL-YRSPVLNRENTAA

Query:  GSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG---------
         ++RR R  G   +LP WYPRTPLRDIT +VRAIER     R   G G D+      P       LE  V ++G+H+    S+VTP P+VG         
Subjt:  GSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG---------

Query:  -KVPKILLGIANQ-NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
         KV K+LL I  +     A  +TP+KKLLNSIDKVEK+VM E+QKLK TP AK+ EREKRVRTLM+ R
Subjt:  -KVPKILLGIANQ-NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTTTAAGTAGCGCCCAAATTTTCGCATTTGAAATTTGCCCAAAATTTCGCCTTCTCTCCAAGCAGCTCCATCTTCTTCCCTCTCATTTTTCAACTGCGCGTCTCAC
AGAAGAGAGCGCCTCCCACCAATCCACCGCCATTTCGTTTGGTCAAAGGTTAAACAAATACTCCATTGAAGCTCACTGGAATCTCACAGTTTTCTTTTCCATAATGTCGG
AAGCAAGAGATAGATTGGAGAGGCAAGTGGATCATGCTGAGGTATTTGCTCGTCGGAGATCGGAAGGTATATTGGACGAGCAAGAAATGAATTCTCATTTGATAGGTACT
CAGATTGCACGCACTACAACGACTACTGCTCAACAAAGACCTACGAATCCCAGCCCTGGTGGAGGTGGTCCGAATCTGAGACGCACTTTTGGTTCTCCCATTTCTGGTGG
AATTGGGCGTAATAGACATCTTTACAGATCTCCAGTTTTGAACCGCGAGAATACGGCGGCTGGGAGTTCCCGGCGGAATAGATCTCGGGGTAGAAACAGTGTATTACCGA
TTTGGTACCCAAGAACCCCTCTCCGCGACATAACCGCAGTTGTGAGGGCAATTGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAATAGTCCT
GCTCCCTCGGACGAAAGAGCTTTAGAGTACAGCGTATCTGTGGCAGGTGATCATCAAGAGCCAAGCATTTCTCTGGTCACCCCAAAACCAACCGTAGGCAAAGTTCCAAA
GATTCTTCTTGGAATCGCAAATCAGAACACGGTAGGGGCCGAGACTCTCACTCCCCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGT
TGCAGAAATTGAAAAGAACTCCCAGTGCTAAGAAAGCAGAGAGGGAGAAAAGGGTTCGAACTTTAATGTCGTTTCGTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAATTGAAAATGAGTTTAAGTAGCGCCCAAATTTTCGCATTTGAAATTTGCCCAAAATTTCGCCTTCTCTCCAAGCAGCTCCATCTTCTTCCCTCTCATTTTTCAAC
TGCGCGTCTCACAGAAGAGAGCGCCTCCCACCAATCCACCGCCATTTCGTTTGGTCAAAGGTTAAACAAATACTCCATTGAAGCTCACTGGAATCTCACAGTTTTCTTTT
CCATAATGTCGGAAGCAAGAGATAGATTGGAGAGGCAAGTGGATCATGCTGAGGTATTTGCTCGTCGGAGATCGGAAGGTATATTGGACGAGCAAGAAATGAATTCTCAT
TTGATAGGTACTCAGATTGCACGCACTACAACGACTACTGCTCAACAAAGACCTACGAATCCCAGCCCTGGTGGAGGTGGTCCGAATCTGAGACGCACTTTTGGTTCTCC
CATTTCTGGTGGAATTGGGCGTAATAGACATCTTTACAGATCTCCAGTTTTGAACCGCGAGAATACGGCGGCTGGGAGTTCCCGGCGGAATAGATCTCGGGGTAGAAACA
GTGTATTACCGATTTGGTACCCAAGAACCCCTCTCCGCGACATAACCGCAGTTGTGAGGGCAATTGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGT
GACAATAGTCCTGCTCCCTCGGACGAAAGAGCTTTAGAGTACAGCGTATCTGTGGCAGGTGATCATCAAGAGCCAAGCATTTCTCTGGTCACCCCAAAACCAACCGTAGG
CAAAGTTCCAAAGATTCTTCTTGGAATCGCAAATCAGAACACGGTAGGGGCCGAGACTCTCACTCCCCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAG
TAATGGAGGAGTTGCAGAAATTGAAAAGAACTCCCAGTGCTAAGAAAGCAGAGAGGGAGAAAAGGGTTCGAACTTTAATGTCGTTTCGTTGATTCATTTCAACACAAACA
CATTCCCTGAAATGTTTTGGCAATCATCTGACTTAAACTCAGGAACTTCAGAGGATCAATCATCTGCTGATGATTACTTTGGTCAAGAGCGCCCATTGATCAGAGGGAGG
GAGAAAGAGATCCTCATCTTCTGATGAGATCTCATCTCTGGTGGAGGATTATGTGTTAGTTTCCTTTAAAAAATGAATCCTTTTCATTTACAAAAACCATCTTTGGATTT
AGATGTTTAGTAAGCATTCTACAATATATAGGGCTTATTTTGTTGTTGTAGGGTCTGCCTTTGTTTGTTTACTACAGATTATAGATATAGCTAAAGCAGGCCTTTTCTGG
GCGGTGGAAATGATGTAAATAGAAATTTTATTCACTCTACAACTTGAAATTTTTGCCTTTCGAAATCTTATTAGATGCACATTTTTGATTGGCTGCCATTATCATCAGGT
TTGAAGTGATCTCTACAATCAGGTGAGAATGAAATCCCTT

Protein sequence

Show/hide protein sequence

MSLSSAQIFAFEICPKFRLLSKQLHLLPSHFSTARLTEESASHQSTAISFGQRLNKYSIEAHWNLTVFFSIMSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGT
QIARTTTTTAQQRPTNPSPGGGGPNLRRTFGSPISGGIGRNRHLYRSPVLNRENTAAGSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSP
APSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKILLGIANQNTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR

Lsi01G018920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome