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Lsi01G018960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G018960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC113729324
Genome locationchr01:22159892..22164827
RNA-Seq ExpressionLsi01G018960
SyntenyLsi01G018960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8362767.1 hypothetical protein BUALT_BualtUnG0041600 [Buddleja alternifolia]3.1e-1171.43Show/hide
Query:  SPVEAGHTGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQQT
        +P +  +T KLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQG      +LH  T
Subjt:  SPVEAGHTGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQQT
XP_016437897.1 PREDICTED: uncharacterized protein LOC107763905 [Nicotiana tabacum]2.2e-04100Show/hide
Query:  SFGYAGTKSPLTTNQQTSSGWVLPG
        SFGYAGTKSPLTTNQQTSSGWVLPG
Subjt:  SFGYAGTKSPLTTNQQTSSGWVLPG
XP_020546984.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105179429 [Sesamum indicum]2.2e-0455.74Show/hide
Query:  FGYAGTKSPLTTNQQTSSGWVLPGATLLMHCRRSIDIGSRFHRSRFIHLYVMSRVYDNKGP
        FGYAGTKSPLTTNQQTSSGWVLPG        RS   G+   R RF    V+SR      P
Subjt:  FGYAGTKSPLTTNQQTSSGWVLPGATLLMHCRRSIDIGSRFHRSRFIHLYVMSRVYDNKGP
XP_027184067.1 LOW QUALITY PROTEIN: uncharacterized protein LOC113782373 [Coffea eugenioides]4.8e-0489.66Show/hide
Query:  ERPLSFGYAGTKSPLTTNQQTSSGWVLPG
        +RP  FGYAGTKSPLTTNQQTSSGWVLPG
Subjt:  ERPLSFGYAGTKSPLTTNQQTSSGWVLPG
XP_031095155.1 LOW QUALITY PROTEIN: uncharacterized protein LOC115999446 [Ipomoea triloba]2.2e-04100Show/hide
Query:  SFGYAGTKSPLTTNQQTSSGWVLPG
        SFGYAGTKSPLTTNQQTSSGWVLPG
Subjt:  SFGYAGTKSPLTTNQQTSSGWVLPG
TrEMBL top hitse value%identityAlignment
A0A1S3XDI4 uncharacterized protein LOC1077639051.1e-04100Show/hide
Query:  SFGYAGTKSPLTTNQQTSSGWVLPG
        SFGYAGTKSPLTTNQQTSSGWVLPG
Subjt:  SFGYAGTKSPLTTNQQTSSGWVLPG
A0A443Q424 Uncharacterized protein3.1e-04100Show/hide
Query:  FGYAGTKSPLTTNQQTSSGWVLPG
        FGYAGTKSPLTTNQQTSSGWVLPG
Subjt:  FGYAGTKSPLTTNQQTSSGWVLPG
A0A6P6W266 LOW QUALITY PROTEIN: uncharacterized protein LOC1137293242.3e-0489.66Show/hide
Query:  ERPLSFGYAGTKSPLTTNQQTSSGWVLPG
        +RP  FGYAGTKSPLTTNQQTSSGWVLPG
Subjt:  ERPLSFGYAGTKSPLTTNQQTSSGWVLPG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07599.1 unknown protein3.2e-0691.67Show/hide
Query:  FGYAGTKSPLTTNQQTSSGWVLPG
        F YA TKSPLTTNQQTSSGWVLPG
Subjt:  FGYAGTKSPLTTNQQTSSGWVLPG
AT2G07599.2 unknown protein3.2e-0691.67Show/hide
Query:  FGYAGTKSPLTTNQQTSSGWVLPG
        F YA TKSPLTTNQQTSSGWVLPG
Subjt:  FGYAGTKSPLTTNQQTSSGWVLPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTCTCATGGAGTCTACTACACTAGCCAAGAAAGAGTGTATTAGACTCCATTCGCCCGTGGAGGCGGGTCACACGGGCAAGTTGAAGAAGGGTTTGGGTTCCGA
GGAGCTACCAGAGCAGGGGGTTTTAACTGCCCTGATAGCCGGGAAGAGCCTTAGACTTCCGCCGGAGTTCCCGCAGGGACAGGCCAAACCAACCCAGGAACTTCACCAGC
AAACTCCACACGTCGACCCAGGAGGTGAGCGCCCCCTTTCTTTTGGGTATGCAGGTACTAAGAGTCCTCTCACTACCAACCAGCAGACATCATCTGGCTGGGTCTTGCCG
GGTGCGACTCTGTTGATGCATTGTCGTAGGTCAATTGATATCGGCTCTAGGTTTCATCGAAGCAGATTTATTCATTTGTATGTTATGTCACGAGTATATGATAATAAAGG
TCCTATAGTTTGCATGATGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCTCTCATGGAGTCTACTACACTAGCCAAGAAAGAGTGTATTAGACTCCATTCGCCCGTGGAGGCGGGTCACACGGGCAAGTTGAAGAAGGGTTTGGGTTCCGA
GGAGCTACCAGAGCAGGGGGTTTTAACTGCCCTGATAGCCGGGAAGAGCCTTAGACTTCCGCCGGAGTTCCCGCAGGGACAGGCCAAACCAACCCAGGAACTTCACCAGC
AAACTCCACACGTCGACCCAGGAGGTGAGCGCCCCCTTTCTTTTGGGTATGCAGGTACTAAGAGTCCTCTCACTACCAACCAGCAGACATCATCTGGCTGGGTCTTGCCG
GGTGCGACTCTGTTGATGCATTGTCGTAGGTCAATTGATATCGGCTCTAGGTTTCATCGAAGCAGATTTATTCATTTGTATGTTATGTCACGAGTATATGATAATAAAGG
TCCTATAGTTTGCATGATGCAGTAA
Protein sequenceShow/hide protein sequence
MTPLMESTTLAKKECIRLHSPVEAGHTGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQQTPHVDPGGERPLSFGYAGTKSPLTTNQQTSSGWVLP
GATLLMHCRRSIDIGSRFHRSRFIHLYVMSRVYDNKGPIVCMMQ