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Lsi01G019030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G019030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHeat Stress Transcription Factor family protein
Genome locationchr01:22592252..22592578
RNA-Seq ExpressionLsi01G019030
SyntenyLsi01G019030
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000232 - Heat shock factor (HSF)-type, DNA-binding
IPR027725 - Heat shock transcription factor family
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033512.1 Heat stress transcription factor B-3, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-3480Show/hide
Query:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSNNN  D+KGL     P     +++KSTPPPFLVKTYT VEDPATD+VISWNG+GTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

XP_022152241.1 heat stress transcription factor B-3-like [Momordica charantia]1.2e-3382.22Show/hide
Query:  MEAGVSNNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSN+ K         ES I+RKSTPPPFLVKTY AVEDPATD+VISWNGDGTAFVVWQTAEFAKDVLP LFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

XP_022928625.1 heat stress transcription factor B-3 [Cucurbita moschata]4.6e-3378.95Show/hide
Query:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSNNN  D+KGL     P     +++KSTPPPFLVKTYT VEDPATD+VISWN +GTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

XP_022967894.1 heat stress transcription factor B-3 [Cucurbita maxima]4.1e-3481.05Show/hide
Query:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSNNN  D+KGL     P     +I+KSTPPPFLVKTYT VEDPATD+VISWNG+GTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

XP_038883399.1 heat stress transcription factor B-3-like [Benincasa hispida]1.6e-3890.22Show/hide
Query:  MEAGVS--NNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVS  NNNKNDEKGLPA   +IIRKSTP PFLVKTYT VEDPATDEVISWNG+GTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
Subjt:  MEAGVS--NNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

TrEMBL top hitse value%identityAlignment
A0A0A0KYD7 HSF_DOMAIN domain-containing protein1.9e-3276.64Show/hide
Query:  MEAGVS--NNNKNDEKGLPA-----AESEI-IRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYVR
        ME GVS  NNN+N+EK L +     AE+EI +RKSTP PFL+KTY  VEDPATD+VISWN DGTAFVVWQTAEFAKDVLPKLFKH NFSSFVRQLNTYVR
Subjt:  MEAGVS--NNNKNDEKGLPA-----AESEI-IRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYVR

Query:  FSSSLPI
        F S LPI
Subjt:  FSSSLPI

A0A5D3CGR4 Heat stress transcription factor B-36.6e-3075.51Show/hide
Query:  MEAGVS--NNNKNDEKGLPA-----AESEI-IRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVS  NNN+N+EK L +     AESEI +RKST  PFL+KTY  VEDP TD+VISWN DGTAFVVWQTAEFAKD+LPKLFKH NFSSFVRQLNTY
Subjt:  MEAGVS--NNNKNDEKGLPA-----AESEI-IRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

A0A6J1DH46 heat stress transcription factor B-3-like5.8e-3482.22Show/hide
Query:  MEAGVSNNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSN+ K         ES I+RKSTPPPFLVKTY AVEDPATD+VISWNGDGTAFVVWQTAEFAKDVLP LFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

A0A6J1ES59 heat stress transcription factor B-32.2e-3378.95Show/hide
Query:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSNNN  D+KGL     P     +++KSTPPPFLVKTYT VEDPATD+VISWN +GTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

A0A6J1HY14 heat stress transcription factor B-32.0e-3481.05Show/hide
Query:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        MEAGVSNNN  D+KGL     P     +I+KSTPPPFLVKTYT VEDPATD+VISWNG+GTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
Subjt:  MEAGVSNNNKNDEKGL-----PAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

SwissProt top hitse value%identityAlignment
O22230 Heat stress transcription factor B-31.2e-2565.17Show/hide
Query:  NNNKNDEKGLP-----AAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        N+N NDE+ LP        +       PPPFLVKTY  VEDP TD VISWN  GT FVVWQ AEFA+D+LP LFKHCNFSSFVRQLNTY
Subjt:  NNNKNDEKGLP-----AAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

Q652B0 Heat stress transcription factor B-2c3.4e-2369.86Show/hide
Query:  AAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        AAE+   ++S P PFL KTY  VEDPA D+VISWN DG+ FVVW+ AEFA+D+LPK FKH NFSSFVRQLNTY
Subjt:  AAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

Q6Z9C8 Heat stress transcription factor B-2b2.2e-2263.29Show/hide
Query:  PAAESEII-----RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        PAAE+  +     +++ P PFL KTY  V+DPA D+VISWN DG+ FVVW+ AEFA+D+LPK FKH NFSSFVRQLNTY
Subjt:  PAAESEII-----RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

Q7XRX3 Heat stress transcription factor B-2a1.3e-2278.69Show/hide
Query:  PPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        PPFL KTY  VEDP+TDE ISWN  GTAFVVW+ AEFA+D+LPK FKH NFSSFVRQLNTY
Subjt:  PPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

Q9T0D3 Heat stress transcription factor B-2b3.8e-2271.21Show/hide
Query:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        ++S P PFL KTY  VEDP  DE+ISWN DGT F+VW+ AEFA+D+LPK FKH NFSSFVRQLNTY
Subjt:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

Arabidopsis top hitse value%identityAlignment
AT1G46264.1 heat shock transcription factor B41.9e-2167.69Show/hide
Query:  KSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        K+ P PFL KTY  V+DPATD V+SW  D T FVVW+  EFA+D+LP  FKH NFSSFVRQLNTY
Subjt:  KSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

AT2G41690.1 heat shock transcription factor B38.9e-2765.17Show/hide
Query:  NNNKNDEKGLP-----AAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        N+N NDE+ LP        +       PPPFLVKTY  VEDP TD VISWN  GT FVVWQ AEFA+D+LP LFKHCNFSSFVRQLNTY
Subjt:  NNNKNDEKGLP-----AAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

AT4G11660.1 winged-helix DNA-binding transcription factor family protein2.7e-2371.21Show/hide
Query:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        ++S P PFL KTY  VEDP  DE+ISWN DGT F+VW+ AEFA+D+LPK FKH NFSSFVRQLNTY
Subjt:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

AT4G36990.1 heat shock factor 43.5e-2369.7Show/hide
Query:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        ++S P PFL KTY  V+D +TD+V+SWN +GTAFVVW+TAEFAKD+LP+ FKH NFSSF+RQLNTY
Subjt:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY

AT5G62020.1 heat shock transcription factor B2A4.3e-2165.15Show/hide
Query:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY
        ++S P PFL KT+  VED + D+VISWN DG++F+VW   +FAKD+LPK FKH NFSSFVRQLNTY
Subjt:  RKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTGGAGTGAGCAATAATAACAAAAATGATGAGAAGGGGTTGCCGGCGGCGGAGAGTGAGATCATAAGAAAGTCAACGCCGCCACCGTTTCTGGTGAAGACTTA
TACGGCAGTGGAGGATCCAGCGACGGACGAGGTGATATCGTGGAATGGTGACGGGACGGCGTTTGTAGTTTGGCAGACGGCGGAATTCGCTAAAGATGTATTGCCAAAGC
TGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGTACGCTTTTCTTCTTCTTTACCTATTTTATTTAATTCATTACATTATTTATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCTGGAGTGAGCAATAATAACAAAAATGATGAGAAGGGGTTGCCGGCGGCGGAGAGTGAGATCATAAGAAAGTCAACGCCGCCACCGTTTCTGGTGAAGACTTA
TACGGCAGTGGAGGATCCAGCGACGGACGAGGTGATATCGTGGAATGGTGACGGGACGGCGTTTGTAGTTTGGCAGACGGCGGAATTCGCTAAAGATGTATTGCCAAAGC
TGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGTACGCTTTTCTTCTTCTTTACCTATTTTATTTAATTCATTACATTATTTATCTTAG
Protein sequenceShow/hide protein sequence
MEAGVSNNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYVRFSSSLPILFNSLHYLS