CuGenDBv2

Gene ID	Lsi01G019110
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH:ubiquinone oxidoreductase, ESSS subunit
Genome location	chr01:23129137..23129499
RNA-Seq Expression	Lsi01G019110
Synteny	Lsi01G019110
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

4.9e-60

94.17

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME +GIS SGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]

1.4e-59

94.17

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME L +SGSGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

8.3e-60

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME L ISGSGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]

3.1e-59

94.17

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME L +S SGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

8.0e-63

98.33

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHE+RPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEMEKLG+SGSGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A067KZT1 Uncharacterized protein

3.9e-55

89.83

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT AS MLR RL  SLRTRGG AAG SRWTSPGHEERPKGYLFNRTPPP GQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSE
        LERLEMEKLG+SGSG SE
Subjt:  LERLEMEKLGISGSGSSE

A0A6J1DCT8 uncharacterized protein LOC111019565

2.4e-60

94.17

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME +GIS SGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

A0A6J1EGU8 uncharacterized protein LOC111432424

6.8e-60

94.17

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME L +SGSGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

4.0e-60

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSESD
        LERLEME L ISGSGSSESD
Subjt:  LERLEMEKLGISGSGSSESD

I3NMS3 Uncharacterized protein

6.6e-55

89.83

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS  PFT AS+MLR RL  SLRTRGGAAAG SRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGSSE
        LERLEMEKLG SGSG SE
Subjt:  LERLEMEKLGISGSGSSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

6.8e-44

71.55

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS    T A+  LR+R+       G  +AG SRW +PGHEERPKGY  NRTPP PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGS
        LERLEMEKL  +G  S
Subjt:  LERLEMEKLGISGSGS

AT3G57785.1 unknown protein

3.4e-43

71.55

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Query:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        M S  P   A+  LR+R+    R+ G  + G SRW +PGHEERPKGY  NRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISGSGS
        LERLEMEKL  +G  S
Subjt:  LERLEMEKLGISGSGS

Sequences

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CDS sequence

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ATGCCCTCGCCGACGCCCTTTACAAACGCCTCAAATATGCTCCGGCACCGCCTTCTCCCTTCTCTCCGCACCCGCGGTGGAGCCGCCGCCGGACAGAGCCGGTGGACCAG
TCCCGGCCACGAGGAGCGCCCCAAGGGCTATCTTTTCAATCGGACTCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTCCCTTGTTATGTTACTAGTT
TTCTTACTATCGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAGGCCCTCGAGCGCCTTGAGATGGAGAAGCTGGGT
ATCTCTGGCTCTGGATCATCTGAATCTGACTGA

mRNA sequence

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Protein sequence

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MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLG
ISGSGSSESD

Lsi01G019110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome