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Lsi01G019160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G019160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:23667430..23667732
RNA-Seq ExpressionLsi01G019160
SyntenyLsi01G019160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649705.1 hypothetical protein Csa_011947, partial [Cucumis sativus]8.9e-0761.29Show/hide
Query:  VNSLELGGREI--DDLGTSTIDSLKVGIV-ASKVVGACIESRMVLEVAMSVDGEDMIRRKKN
        +NS E+GGREI  DD GTS IDSLK+ +V +S+VVG C +S M L VAM ++GEDM  RKKN
Subjt:  VNSLELGGREI--DDLGTSTIDSLKVGIV-ASKVVGACIESRMVLEVAMSVDGEDMIRRKKN

KAE8649712.1 hypothetical protein Csa_012861, partial [Cucumis sativus]9.8e-1456.84Show/hide
Query:  DEAGVGALASIPLRSTVVNSLELGGREIDVNSLELGGREIDDLGTSTIDSLKVGIV-ASKVVGACIESRMVLEVAMSVDGEDMIRRKKNVKKNVS
        ++AG GALA IPL S ++NS E+GGREID           DD GTS IDSLK+ +V +S+VVG C +S M L VAM +DGEDM  RKKNVKK  S
Subjt:  DEAGVGALASIPLRSTVVNSLELGGREIDVNSLELGGREIDDLGTSTIDSLKVGIV-ASKVVGACIESRMVLEVAMSVDGEDMIRRKKNVKKNVS

KAG6581979.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-0640.91Show/hide
Query:  EAGVGALASIPLRSTVVNSLELGGREID-------------VNSLELGGREIDDLG-----TSTIDSLKVGIVASKVVGACIESRMVLEVAMSVDGEDMI
        E G+GALA   L S V    E+GG +ID             V +  L G ++D        +S +D+L+VGIVAS VV AC ES M LEVA S + ED +
Subjt:  EAGVGALASIPLRSTVVNSLELGGREID-------------VNSLELGGREIDDLG-----TSTIDSLKVGIVASKVVGACIESRMVLEVAMSVDGEDMI

Query:  RRKKNVKKNV
        +RKK  ++N+
Subjt:  RRKKNVKKNV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTTAGGATGGATGAGGCAGGGGTAGGTGCGCTTGCATCCATTCCACTAAGATCAACAGTGGTAAATTCGTTAGAGCTTGGAGGAAGGGAAATTGATGTAAACTC
GTTAGAGCTTGGAGGAAGAGAAATTGATGATTTAGGTACTTCAACAATAGATTCTCTAAAAGTAGGAATTGTAGCTTCCAAAGTTGTTGGAGCATGTATTGAATCAAGAA
TGGTTCTAGAAGTTGCCATGAGTGTGGATGGAGAAGACATGATAAGGAGGAAGAAGAATGTGAAGAAGAATGTATCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTTAGGATGGATGAGGCAGGGGTAGGTGCGCTTGCATCCATTCCACTAAGATCAACAGTGGTAAATTCGTTAGAGCTTGGAGGAAGGGAAATTGATGTAAACTC
GTTAGAGCTTGGAGGAAGAGAAATTGATGATTTAGGTACTTCAACAATAGATTCTCTAAAAGTAGGAATTGTAGCTTCCAAAGTTGTTGGAGCATGTATTGAATCAAGAA
TGGTTCTAGAAGTTGCCATGAGTGTGGATGGAGAAGACATGATAAGGAGGAAGAAGAATGTGAAGAAGAATGTATCATATTGA
Protein sequenceShow/hide protein sequence
MQVRMDEAGVGALASIPLRSTVVNSLELGGREIDVNSLELGGREIDDLGTSTIDSLKVGIVASKVVGACIESRMVLEVAMSVDGEDMIRRKKNVKKNVSY