CuGenDBv2

Gene ID	Lsi01G019450
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ultraviolet-B receptor UVR8 isoform X1
Genome location	chr01:25074404..25076340
RNA-Seq Expression	Lsi01G019450
Synteny	Lsi01G019450
Gene Ontology terms	GO:0004497 - monooxygenase activity (molecular function) GO:0005506 - iron ion binding (molecular function) GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR000408 - Regulator of chromosome condensation, RCC1 IPR009091 - Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022925248.1 ultraviolet-B receptor UVR8 isoform X3 [Cucurbita moschata]

7.5e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

XP_022966331.1 ultraviolet-B receptor UVR8 isoform X1 [Cucurbita maxima]

7.5e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

XP_022966332.1 ultraviolet-B receptor UVR8 isoform X2 [Cucurbita maxima]

7.5e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

XP_038883567.1 ultraviolet-B receptor UVR8 isoform X1 [Benincasa hispida]

2.0e-30

98.51

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK

XP_038883571.1 ultraviolet-B receptor UVR8 isoform X5 [Benincasa hispida]

2.0e-30

98.51

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TCI0 Ultraviolet-B receptor UVR8 isoform X1

1.4e-29

95.52

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPT I+LGENVKAVQVSCGFNHTGAILEYK
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYK

A0A6J1EEN4 ultraviolet-B receptor UVR8 isoform X3

3.6e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

A0A6J1HMP4 ultraviolet-B receptor UVR8 isoform X2

3.6e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

A0A6J1HP08 ultraviolet-B receptor UVR8 isoform X1

3.6e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

A0A6J1HRS2 PH, RCC1 and FYVE domains-containing protein 1 isoform X3

3.6e-30

98.48

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        SGGAIFTWGWGGSHGTF VDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

SwissProt top hits

e value

%identity

Alignment

Q9FN03 Ultraviolet-B receptor UVR8

3.3e-04

33.85

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILE
        S G ++ WGW            +  GQ+G G+++D   P  +   ++ K VQVSCG+ HT A+ E
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILE

Arabidopsis top hits

e value

%identity

Alignment

AT1G65920.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain

2.0e-04

41.51

Show/hide

Query:  SHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILE
        S G  F  G  + G LGHGS     KP  ++    +K + VSCG  HT AI+E
Subjt:  SHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILE

AT5G08710.1 Regulator of chromosome condensation (RCC1) family protein

3.7e-27

75.76

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY
        S   +FTWGWGGSHGTF VDGHSSGGQLGHGSDVDY +P M+DLG+NV+AV +SCGFNHT A+LE+
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY

AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein

2.3e-05

33.85

Show/hide

Query:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILE
        S G ++ WGW            +  GQ+G G+++D   P  +   ++ K VQVSCG+ HT A+ E
Subjt:  SGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGTTTGTGACTGAATCAGGTGGCGCTATATTCACGTGGGGCTGGGGAGGTTCTCACGGAACGTTTTTTGTGGATGGTCATTCTTCTGGGGGTCAGCTGGGGCATGG
AAGTGATGTTGACTATGTGAAACCGACAATGATCGACCTCGGAGAAAATGTGAAGGCAGTACAAGTCTCCTGTGGTTTCAACCATACCGGTGCAATACTCGAGTACAAGT
CTCTGAAATGGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKFVTESGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYKSLKW

Lsi01G019450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome