; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G019460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G019460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUltraviolet-B receptor UVR8 isoform X1
Genome locationchr01:25082268..25089566
RNA-Seq ExpressionLsi01G019460
SyntenyLsi01G019460
Gene Ontology termsNA
InterPro domainsIPR000408 - Regulator of chromosome condensation, RCC1
IPR009091 - Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02446.1 ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo var. makuwa]2.7e-12485.17Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL
        MLTRR LTEF+IGFNSETW+R +TRWFSS+SGK F AVWGNGDFGRLGLGNLDSQWSPV  CSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQL
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL

Query:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV
        GISDEK+F  EPVEVRI KEA+HISAGYNHSCV+T            ADGELYMWG+NS GQLGLGK+SAKAV LPTKVDSLDGIVIKRAALGSDHS+AV
Subjt:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV

Query:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVDG
        ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE TPRLIKEL+GIKVK VAAGMLHSACVDG
Subjt:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVDG

XP_038883567.1 ultraviolet-B receptor UVR8 isoform X1 [Benincasa hispida]1.7e-12988.89Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG
        MLTRRRLTEFI GFNSETW R +TRW SSNSGK FAAVWGNGDFGRLGLGNLDSQWSPVACSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQLG
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG

Query:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA
        ISDEK+FCTEPVEV IQKEAVHISAGYNHSCVVT            ADGELYMWG+NS GQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGS+HSMAVA
Subjt:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA

Query:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE+TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

XP_038883568.1 ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida]1.7e-12988.89Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG
        MLTRRRLTEFI GFNSETW R +TRW SSNSGK FAAVWGNGDFGRLGLGNLDSQWSPVACSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQLG
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG

Query:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA
        ISDEK+FCTEPVEV IQKEAVHISAGYNHSCVVT            ADGELYMWG+NS GQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGS+HSMAVA
Subjt:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA

Query:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE+TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

XP_038883569.1 ultraviolet-B receptor UVR8 isoform X3 [Benincasa hispida]1.7e-12988.89Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG
        MLTRRRLTEFI GFNSETW R +TRW SSNSGK FAAVWGNGDFGRLGLGNLDSQWSPVACSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQLG
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG

Query:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA
        ISDEK+FCTEPVEV IQKEAVHISAGYNHSCVVT            ADGELYMWG+NS GQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGS+HSMAVA
Subjt:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA

Query:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE+TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

XP_038883570.1 ultraviolet-B receptor UVR8 isoform X4 [Benincasa hispida]1.7e-12988.89Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG
        MLTRRRLTEFI GFNSETW R +TRW SSNSGK FAAVWGNGDFGRLGLGNLDSQWSPVACSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQLG
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG

Query:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA
        ISDEK+FCTEPVEV IQKEAVHISAGYNHSCVVT            ADGELYMWG+NS GQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGS+HSMAVA
Subjt:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA

Query:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE+TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

TrEMBL top hitse value%identityAlignment
A0A0A0KZD6 Uncharacterized protein2.5e-12384.67Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG
        MLTRR LT+ IIGFNSETW+R +TRWF+S+SGK F AVWGNGDFGRLGLGNLDSQWSPV CS+FD EML+ +ACGGAHTLFLTESGRVYATGLNNFGQLG
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG

Query:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA
        ISDEK F TEPVEVRI KEA+HISAGYNHSCVVT            ADGELYMWG+NS GQLGLGK+SAKAV LPTKVDSLDGIVIKRAALGSDHS+AVA
Subjt:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA

Query:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

A0A1S3B5Y7 ultraviolet-B receptor UVR8 isoform X13.3e-12384.73Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL
        MLTRR L EF+IGFNSETW+R +TRWFSS+SGK F AVWGNGDFGRLGLGNLDSQWSPV  CSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQL
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL

Query:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV
        GISDEK+F  EPVEVRI KEA+HISAGYNHSCV+T            ADGELYMWG+NS GQLGLGK+SAKAV LPTKVDSLDGIVIKRAALGSDHS+AV
Subjt:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV

Query:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

A0A5A7TCI0 Ultraviolet-B receptor UVR8 isoform X13.3e-12384.73Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL
        MLTRR L EF+IGFNSETW+R +TRWFSS+SGK F AVWGNGDFGRLGLGNLDSQWSPV  CSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQL
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL

Query:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV
        GISDEK+F  EPVEVRI KEA+HISAGYNHSCV+T            ADGELYMWG+NS GQLGLGK+SAKAV LPTKVDSLDGIVIKRAALGSDHS+AV
Subjt:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV

Query:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE TPRLIKEL+GIKVK VAAGMLHSACVD
Subjt:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

A0A5D3BW43 Ultraviolet-B receptor UVR8 isoform X11.3e-12485.17Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL
        MLTRR LTEF+IGFNSETW+R +TRWFSS+SGK F AVWGNGDFGRLGLGNLDSQWSPV  CSAFD EML+D+ACGGAHTLFLTESGRVYATGLNNFGQL
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPV-ACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQL

Query:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV
        GISDEK+F  EPVEVRI KEA+HISAGYNHSCV+T            ADGELYMWG+NS GQLGLGK+SAKAV LPTKVDSLDGIVIKRAALGSDHS+AV
Subjt:  GISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAV

Query:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVDG
        ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSE TPRLIKEL+GIKVK VAAGMLHSACVDG
Subjt:  ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVDG

A0A6J1DMZ3 ultraviolet-B receptor UVR8 isoform X12.1e-12285.06Show/hide
Query:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG
        ML+RRR  EFIIGFNSETWRR  +R  SSNSGK FAAVWGNGDFGRLGLG LDSQW PVACSAF+HE L+D+ACGGAHTLFLTESGRVYATGLNNFGQLG
Subjt:  MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLG

Query:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA
        ISD+K++ TEPVEV+IQKEAVHISAGYNHSCVVT            ADGELYMWGMNS GQLGLGKRSAKAV LPTKVDSLDGIVIKRAALGSDHSMAV 
Subjt:  ISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVA

Query:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        DGGEV SWGDGRSGRLGHGHEST LGFLKSTSE+TPRLIKELDGIKVKQ+AAGMLHSACVD
Subjt:  DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

SwissProt top hitse value%identityAlignment
Q15034 Probable E3 ubiquitin-protein ligase HERC32.3e-2533.03Show/hide
Query:  WGNGDFGRLGLG-NLDS-QWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC
        WG    G+ G+  NL      P  C       +++VACGG H++FL E G VY  GLN  GQLG   E N   E +     +  +H++ G +HS  ++  
Subjt:  WGNGDFGRLGLG-NLDS-QWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC

Query:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP
                    G+L+ WG  S GQLGL   +  +V +P  +  L+   I + + G+ H +A+A  G+ F+WG    G+LG G E          S+ +P
Subjt:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP

Query:  RLIKELDGIKVKQVAAGMLHS
        + ++ L+GI + QVAAG  HS
Subjt:  RLIKELDGIKVKQVAAGMLHS

Q15751 Probable E3 ubiquitin-protein ligase HERC12.2e-2330.17Show/hide
Query:  SNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESG-RVYATGLNNFGQLGISDE-KNFCTEPVEVRIQKEAVHISAG
        ++ GK F   +GNGD+GRLGLGN  ++  P   +A +   +  VACG  HTL ++  G  V+A G  ++G+LG+ +       + ++V        ++ G
Subjt:  SNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESG-RVYATGLNNFGQLGISDE-KNFCTEPVEVRIQKEAVHISAG

Query:  YNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLG
           S  +T             DG +Y +G +    +GL +  A+    P ++  L G++I+  A+G++H++A+A  G+V++WG    G+LG GH      
Subjt:  YNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLG

Query:  FLKSTSEFTPRLIKELDGIKVKQVAAGMLHSA
           +     P L+  L G  V+Q++AG  HSA
Subjt:  FLKSTSEFTPRLIKELDGIKVKQVAAGMLHSA

Q5GLZ8 Probable E3 ubiquitin-protein ligase HERC42.0e-2937.1Show/hide
Query:  WGNGDFGRLGLGNLDSQ--WSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC
        WGN  FG+LGLG +D +    P     F ++ +RDV CG  HT+F+ + G VY  G N+ GQLG    +    + V +  Q   V +S G  H+  +   
Subjt:  WGNGDFGRLGLGNLDSQ--WSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC

Query:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP
                    G++Y WG++S GQLGL   S + +R+P  + SL  I I + A G  HS+A++   EVF WG  + G+LG G +       K TS   P
Subjt:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP

Query:  RLIKELDGIKVKQVAAGMLHS
        +L+K L GI   QVAAG  HS
Subjt:  RLIKELDGIKVKQVAAGMLHS

Q5PQN1 Probable E3 ubiquitin-protein ligase HERC47.0e-3037.56Show/hide
Query:  WGNGDFGRLGLGNLDSQ--WSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC
        WGN  +G+LGLG +D +    P     F ++ +RDV CG  HT+F+ + G VY  G N+ GQLG    +    + V +  Q   V +S G  H+  +   
Subjt:  WGNGDFGRLGLGNLDSQ--WSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC

Query:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP
                    G++Y WG++S GQLGL + S + +R+P  + SL  I I + A G  HS+A++   EVF WG  + G+LG G E       K TS   P
Subjt:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP

Query:  RLIKELDGIKVKQVAAGMLHS
        +LIK L GI   QVAAG  HS
Subjt:  RLIKELDGIKVKQVAAGMLHS

Q6PAV2 Probable E3 ubiquitin-protein ligase HERC42.6e-2935.29Show/hide
Query:  WGNGDFGRLGLGNLDSQ--WSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC
        WGN  +G+LGLG +D +    P     F ++ +RDV CG  HT+F+ + G VY  G N+ GQLG    +    + V +  Q   V ++ G  H+  +   
Subjt:  WGNGDFGRLGLGNLDSQ--WSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVHISAGYNHSCVVTAC

Query:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP
                    G++Y WG++S GQLGL + S + +R+P  + SL  I I + A G  HS+A++   EVF WG  + G+LG G        +    + +P
Subjt:  FVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEFTP

Query:  RLIKELDGIKVKQVAAGMLHS
        +LIK L GI   QVAAG  HS
Subjt:  RLIKELDGIKVKQVAAGMLHS

Arabidopsis top hitse value%identityAlignment
AT1G27060.1 Regulator of chromosome condensation (RCC1) family protein1.6e-2128.04Show/hide
Query:  SNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVH-ISAGY
        ++ GK F   WG G  G+LG G++ +   P   S FD  ++   A G +H+ F+++SG ++  G  +FGQLG  D  +  T         ++V  ++ G 
Subjt:  SNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQKEAVH-ISAGY

Query:  NHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDG----------------
         HS V+             A  ++  +G    GQLG      K+V LP  V  L  + + R +   DHS A++  G+ FSWG G                
Subjt:  NHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDG----------------

Query:  ---RSGRLGHGH--------ESTFLGFLKS-----------TSEFTPRLIKELDGIKVKQVAAGMLHSACV
           R   +G  H        E   LG   +           +SE     + + DG+KV Q+AAG  HSA V
Subjt:  ---RSGRLGHGH--------ESTFLGFLKS-----------TSEFTPRLIKELDGIKVKQVAAGMLHSACV

AT5G08710.1 Regulator of chromosome condensation (RCC1) family protein1.4e-8663.6Show/hide
Query:  TRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVR-IQKEAVH
        +RW SS SGK FAA+WG+GD+GRLGLGNLDSQW+P  CSA     +  VACGGAHTLFLTE+ RV+ATGLN+ GQLG+SD K+   +P+EV  + K+ +H
Subjt:  TRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVR-IQKEAVH

Query:  ISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHES
        ISAGY HS  +T             DGELYMWG NS GQLGLGK++A+ VR+PTKV++L GI I+  ALGS+HS+AV DGGEV SWG G SGRLGHGH+S
Subjt:  ISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHES

Query:  TFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD
        +  G L+S SEFTPRLIKEL+GIKV  VAAG+LHSAC D
Subjt:  TFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVD

AT5G60870.1 Regulator of chromosome condensation (RCC1) family protein3.6e-2129.26Show/hide
Query:  VWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQK----EAVHISAGYNHSCVV
        +WG GD GRLG G  +S + P     F+   +R +A GG H++ LT  G V+  G   FG LG    K +  E V  R+      +   I+    H+  +
Subjt:  VWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQK----EAVHISAGYNHSCVV

Query:  TACFVDPIFYFFIADGELYMWGMNSG-GQLGL----GKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFL
        T              GELYMWG   G G+LGL    G      + +P+KV +L  + +   + G   +MA+   G++++WG   +  LG G         
Subjt:  TACFVDPIFYFFIADGELYMWGMNSG-GQLGL----GKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFL

Query:  KSTSEFTPRLIKELDGIKVKQVAAGMLHS
         +   + P  +  L+G+++ Q+A G  HS
Subjt:  KSTSEFTPRLIKELDGIKVKQVAAGMLHS

AT5G60870.2 Regulator of chromosome condensation (RCC1) family protein3.6e-2129.26Show/hide
Query:  VWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQK----EAVHISAGYNHSCVV
        +WG GD GRLG G  +S + P     F+   +R +A GG H++ LT  G V+  G   FG LG    K +  E V  R+      +   I+    H+  +
Subjt:  VWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTEPVEVRIQK----EAVHISAGYNHSCVV

Query:  TACFVDPIFYFFIADGELYMWGMNSG-GQLGL----GKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFL
        T              GELYMWG   G G+LGL    G      + +P+KV +L  + +   + G   +MA+   G++++WG   +  LG G         
Subjt:  TACFVDPIFYFFIADGELYMWGMNSG-GQLGL----GKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGHESTFLGFL

Query:  KSTSEFTPRLIKELDGIKVKQVAAGMLHS
         +   + P  +  L+G+++ Q+A G  HS
Subjt:  KSTSEFTPRLIKELDGIKVKQVAAGMLHS

AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein6.1e-2132.42Show/hide
Query:  WGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISD-EKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACF
        WG G +G LGLG+   +  P   ++   E +  VACG  HT+ ++ SG +Y  G + +GQLG  D E +     +E         IS G+ H+  +T   
Subjt:  WGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISD-EKNFCTEPVEVRIQKEAVHISAGYNHSCVVTACF

Query:  VDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHG
                 +DG+LY WG N  GQ+G+G    +    P +V   D   + + + G  H++AV +   VF+WG G +G+LG G
Subjt:  VDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACCCGAAGGCGTTTAACGGAGTTCATAATCGGTTTCAATTCGGAAACCTGGAGAAGAAGTTTAACCCGATGGTTTTCCAGCAATTCAGGGAAGACATTTGCAGC
AGTATGGGGTAATGGCGATTTCGGAAGGCTGGGGCTTGGAAATTTGGATTCTCAGTGGAGCCCTGTCGCCTGTTCTGCATTTGATCACGAAATGCTCAGGGATGTTGCTT
GTGGCGGTGCTCACACTCTGTTCTTGACAGAATCTGGACGGGTTTATGCTACTGGTCTTAATAATTTTGGGCAGCTGGGAATATCAGATGAAAAAAACTTTTGTACGGAG
CCTGTTGAGGTTAGAATTCAGAAAGAAGCTGTGCATATTTCAGCTGGTTATAATCACTCCTGCGTTGTTACAGCTTGTTTTGTTGATCCTATATTTTATTTCTTTATAGC
TGATGGAGAACTGTATATGTGGGGGATGAATTCAGGTGGACAGCTTGGTCTTGGAAAAAGGTCAGCAAAAGCAGTACGCCTACCTACTAAAGTAGATAGCTTAGATGGGA
TTGTAATAAAGAGGGCTGCTTTGGGTTCAGATCATTCGATGGCTGTTGCTGATGGAGGTGAAGTTTTTAGTTGGGGAGATGGACGGTCAGGTAGATTGGGTCATGGTCAC
GAGTCAACATTTTTGGGATTTCTAAAAAGTACCAGTGAATTTACACCCAGACTAATTAAAGAACTTGATGGGATTAAGGTTAAACAAGTTGCAGCGGGGATGCTGCACTC
CGCTTGTGTAGATGGTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAGAAACAATTTGATTGCCACTCTGCCTCGCAGGAGCCGTTACACCTCGATTTGACTAAATAGCCACTGCGTAACATGACGGTTTATCAAATATAAAGTATCCCGGGC
ATTACTCAATTTTCCATCCTAAACTAACCGACTCTACCTGCTTCTTCTTCTACCAGAAGACGTAGCACAATTCCTTGCCACCGATCAAAACCCATTTCTTAAATCTCACT
TTTCTTCACCTCACAATCCCGAAATCCGAAACCCAATTCGCGAAAAATCCATATGAATACCGGGACAAGTCGTTCATCTTGATCTTCACATTCACTGTAACAATTTCCTC
ACAGAAATCGATTTAAGCAAACCAATGCTTACCCGAAGGCGTTTAACGGAGTTCATAATCGGTTTCAATTCGGAAACCTGGAGAAGAAGTTTAACCCGATGGTTTTCCAG
CAATTCAGGGAAGACATTTGCAGCAGTATGGGGTAATGGCGATTTCGGAAGGCTGGGGCTTGGAAATTTGGATTCTCAGTGGAGCCCTGTCGCCTGTTCTGCATTTGATC
ACGAAATGCTCAGGGATGTTGCTTGTGGCGGTGCTCACACTCTGTTCTTGACAGAATCTGGACGGGTTTATGCTACTGGTCTTAATAATTTTGGGCAGCTGGGAATATCA
GATGAAAAAAACTTTTGTACGGAGCCTGTTGAGGTTAGAATTCAGAAAGAAGCTGTGCATATTTCAGCTGGTTATAATCACTCCTGCGTTGTTACAGCTTGTTTTGTTGA
TCCTATATTTTATTTCTTTATAGCTGATGGAGAACTGTATATGTGGGGGATGAATTCAGGTGGACAGCTTGGTCTTGGAAAAAGGTCAGCAAAAGCAGTACGCCTACCTA
CTAAAGTAGATAGCTTAGATGGGATTGTAATAAAGAGGGCTGCTTTGGGTTCAGATCATTCGATGGCTGTTGCTGATGGAGGTGAAGTTTTTAGTTGGGGAGATGGACGG
TCAGGTAGATTGGGTCATGGTCACGAGTCAACATTTTTGGGATTTCTAAAAAGTACCAGTGAATTTACACCCAGACTAATTAAAGAACTTGATGGGATTAAGGTTAAACA
AGTTGCAGCGGGGATGCTGCACTCCGCTTGTGTAGATGGTTAAGGTGGGGACCTGTACAGTTGGGGTTCGAATGAGAACGGTTGTCTTGGGAATGGGTCCACAAGTGTCT
TTCATCTCCCTGAAAGAGTCGAAGGTCCCTTTTCAAAATCTCCTGTAAGCAAGGTGTCTTGCGGATGGAAACACACAGCAGCAATCTCAGGTAAGAATTCTCAAATGGAA
CTTGAGATATAA
Protein sequenceShow/hide protein sequence
MLTRRRLTEFIIGFNSETWRRSLTRWFSSNSGKTFAAVWGNGDFGRLGLGNLDSQWSPVACSAFDHEMLRDVACGGAHTLFLTESGRVYATGLNNFGQLGISDEKNFCTE
PVEVRIQKEAVHISAGYNHSCVVTACFVDPIFYFFIADGELYMWGMNSGGQLGLGKRSAKAVRLPTKVDSLDGIVIKRAALGSDHSMAVADGGEVFSWGDGRSGRLGHGH
ESTFLGFLKSTSEFTPRLIKELDGIKVKQVAAGMLHSACVDG