CuGenDBv2

Gene ID	Lsi01G019530
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Lipid phosphate phosphatase delta
Genome location	chr01:25345998..25347034
RNA-Seq Expression	Lsi01G019530
Synteny	Lsi01G019530
Gene Ontology terms	GO:0006665 - sphingolipid metabolic process (biological process) GO:0009737 - response to abscisic acid (biological process) GO:0046839 - phospholipid dephosphorylation (biological process) GO:0090332 - stomatal closure (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008117 - sphinganine-1-phosphate aldolase activity (molecular function) GO:0042392 - sphingosine-1-phosphate phosphatase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK02412.1 lipid phosphate phosphatase delta [Cucumis melo var. makuwa]

4.1e-87

94.25

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Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V YFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVAR+FTPQLP STFLGRMLVGLPTIL+VKFCSKALAKWILP+VSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSIRSTSYIPMLNSSS  KVD  KQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLF+YLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

XP_004144672.1 lipid phosphate phosphatase delta isoform X1 [Cucumis sativus]

4.1e-87

95.4

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Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V YFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLP  TFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSIRSTSYIPMLNSSS  KVD  KQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLF+YLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

XP_022928601.1 lipid phosphate phosphatase delta-like [Cucurbita moschata]

5.9e-86

92.53

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        VTYFWG LSILLLFAYPTPEFPTPS+EFHTAFDGVAFGI++GVQQTYHQFHHEAVARIFTPQLPF+TF+GRMLVGLPTIL VKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSI STSYIPML SSS  KVD SKQRGPLHKLFFFSSQDSFD+DTGIRFVQYAGLAWSVVDLVPSLFSYLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

XP_023543564.1 lipid phosphate phosphatase delta-like [Cucurbita pepo subsp. pepo]

1.0e-85

92.53

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Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        VTYFWGALSILLLFAYPTPEFPTPS+EFHTAFDGVAFGI++GVQQTYHQFHHEAVARIFTPQLPF+TF+GRMLVGLPTIL VKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGM I STSYIPML SSS  KVD SKQRGPLHKLFFFSSQDSFD+DTGIRFVQYAGLAWSVVDLVPSLFSYLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

XP_031740185.1 lipid phosphate phosphatase delta isoform X2 [Cucumis sativus]

8.3e-88

94.35

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Query:  LGAVTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIV
        +G V YFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLP  TFLGRMLVGLPTILMVKFCSKALAKWILPIV
Subjt:  LGAVTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIV

Query:  SNTLGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        SNTLGMSIRSTSYIPMLNSSS  KVD  KQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLF+YLNL
Subjt:  SNTLGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZD1 acidPPc domain-containing protein

2.0e-87

95.4

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V YFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLP  TFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSIRSTSYIPMLNSSS  KVD  KQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLF+YLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

A0A5A7TGN6 Lipid phosphate phosphatase delta

1.6e-84

93.68

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Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V YFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVA +FTPQLP STFLGRMLVGLPTIL+VKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSIRSTSYIPMLNSSS  KVD  KQRGPLHKL FFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLF+YLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

A0A5D3BUC9 Lipid phosphate phosphatase delta

2.0e-87

94.25

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V YFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVAR+FTPQLP STFLGRMLVGLPTIL+VKFCSKALAKWILP+VSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSIRSTSYIPMLNSSS  KVD  KQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLF+YLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

A0A6J1EKR2 lipid phosphate phosphatase delta-like

2.9e-86

92.53

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        VTYFWG LSILLLFAYPTPEFPTPS+EFHTAFDGVAFGI++GVQQTYHQFHHEAVARIFTPQLPF+TF+GRMLVGLPTIL VKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGMSI STSYIPML SSS  KVD SKQRGPLHKLFFFSSQDSFD+DTGIRFVQYAGLAWSVVDLVPSLFSYLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

A0A6J1HXT1 lipid phosphate phosphatase delta-like

4.9e-86

92.53

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        VTYFWGALSILLLFAYPTPEFPTPS+EFHTAFDGVAFGI++GVQQTYHQFHHEAVARIFTPQLPF+TF+GRMLVGLPTIL VKFCSKALAKWILPIVSNT
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LGM I STSYIPML SSS  KVD SKQRGPLHKLFFFSSQDSFD+DTGIRFVQYAGLAWSVVDLVPSLFSYLNL
Subjt:  LGMSIRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

SwissProt top hits

e value

%identity

Alignment

Q9M2G7 Lipid phosphate phosphatase delta

1.1e-63

70.45

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V+ FW ALS LLLFAYPTPE PTPS+E+HTAF+GV  GIV GVQQTY QFHHEA  RIF+P+LP S++LGR++VG+PTIL+VKFCSK+LAKW LP+VSN 
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNS-SSAVKVDKSKQR-GPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LG+ IRS+ YIP L   +S  K D+ K   G L KL  F S DSFDIDTGIRF QYAGLAWSVVDLVPSLFSY+NL
Subjt:  LGMSIRSTSYIPMLNS-SSAVKVDKSKQR-GPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

Arabidopsis top hits

e value

%identity

Alignment

AT3G58490.1 Phosphatidic acid phosphatase (PAP2) family protein

8.0e-65

70.45

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V+ FW ALS LLLFAYPTPE PTPS+E+HTAF+GV  GIV GVQQTY QFHHEA  RIF+P+LP S++LGR++VG+PTIL+VKFCSK+LAKW LP+VSN 
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNS-SSAVKVDKSKQR-GPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LG+ IRS+ YIP L   +S  K D+ K   G L KL  F S DSFDIDTGIRF QYAGLAWSVVDLVPSLFSY+NL
Subjt:  LGMSIRSTSYIPMLNS-SSAVKVDKSKQR-GPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

AT3G58490.2 Phosphatidic acid phosphatase (PAP2) family protein

8.0e-65

70.45

Show/hide

Query:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT
        V+ FW ALS LLLFAYPTPE PTPS+E+HTAF+GV  GIV GVQQTY QFHHEA  RIF+P+LP S++LGR++VG+PTIL+VKFCSK+LAKW LP+VSN 
Subjt:  VTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNT

Query:  LGMSIRSTSYIPMLNS-SSAVKVDKSKQR-GPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL
        LG+ IRS+ YIP L   +S  K D+ K   G L KL  F S DSFDIDTGIRF QYAGLAWSVVDLVPSLFSY+NL
Subjt:  LGMSIRSTSYIPMLNS-SSAVKVDKSKQR-GPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

Sequences

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CDS sequence

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mRNA sequence

Show/hide mRNA sequence

ATGCAATTTCTGGGTGCAGTTACTTATTTCTGGGGTGCCCTGAGCATTCTGTTGCTCTTTGCTTATCCTACTCCTGAGTTTCCTACCCCAAGCTTTGAATTCCACACGGC
TTTTGATGGTGTAGCATTTGGAATTGTAGCAGGAGTACAGCAAACATACCATCAGTTTCATCATGAAGCCGTTGCTCGTATCTTTACTCCACAACTCCCATTTTCCACAT
TTCTTGGTCGGATGCTCGTCGGTTTACCAACCATATTAATGGTGAAGTTTTGTAGCAAAGCTCTGGCTAAATGGATCCTTCCCATTGTTTCAAACACCTTGGGCATGTCC
ATAAGGTCAACCAGCTATATACCAATGCTAAATTCATCCTCAGCTGTTAAGGTAGATAAGAGCAAACAACGTGGTCCTCTGCACAAGCTGTTCTTCTTCTCGAGCCAGGA
CTCATTTGACATTGACACGGGTATTAGGTTCGTTCAATATGCAGGCCTTGCTTGGTCTGTGGTTGATCTTGTTCCCTCTCTTTTTTCTTATTTGAACTTGTGATCTGTTT
AACTCCAATACAATCAGTTCCAAGTTTTAACCTAATTGAATCCTGAGTTCTCTGTATATTTTTTCATGTTGCATAGTCAATGTTTAGAGAAGTCATATGTCCTTGTGTCA
TGGACATTATTTTGTATAATGAGGTGCGGCAATTTTATATGAAGCCAACGAATTTGGCTATTAGCGACTACTATATGAGAAACAAACTTATGAAATGGGTTGTAAAGTGG
AATGGAGGAAGATATGATTCTTCTCGTAGAGTTCGAGTTGAGTTATGCTCCTTTTGAAAAGAAAAGATGATTCTTTAGAAA

Protein sequence

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MQFLGAVTYFWGALSILLLFAYPTPEFPTPSFEFHTAFDGVAFGIVAGVQQTYHQFHHEAVARIFTPQLPFSTFLGRMLVGLPTILMVKFCSKALAKWILPIVSNTLGMS
IRSTSYIPMLNSSSAVKVDKSKQRGPLHKLFFFSSQDSFDIDTGIRFVQYAGLAWSVVDLVPSLFSYLNL

Lsi01G019530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome