; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G019850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G019850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCBS domain-containing protein CBSCBSPB3
Genome locationchr01:26401263..26406882
RNA-Seq ExpressionLsi01G019850
SyntenyLsi01G019850
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041315.1 CBS domain-containing protein CBSCBSPB3 [Cucumis melo var. makuwa]1.4e-3666.44Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL 
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-

Query:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
              DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

TYK02779.1 CBS domain-containing protein CBSCBSPB3 [Cucumis melo var. makuwa]1.4e-3666.44Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL 
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-

Query:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
              DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

XP_004146397.1 CBS domain-containing protein CBSCBSPB3 [Cucumis sativus]4.5e-3566Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI-----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP RR+SL QK   STS+RK VS DNG +SNGN+           +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI-----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  ------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
               DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLA+EA QKMV
Subjt:  ------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

XP_008442154.1 PREDICTED: CBS domain-containing protein CBSCBSPB3 [Cucumis melo]1.4e-3666.44Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL 
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-

Query:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
              DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

XP_038881897.1 CBS domain-containing protein CBSCBSPB3-like [Benincasa hispida]6.7e-3969.33Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI-----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQLVP  RRNSL QK APSTS RK V+ADNG+TSNGN+           +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI-----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  ------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
               DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  ------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

TrEMBL top hitse value%identityAlignment
A0A0A0KYM2 Uncharacterized protein2.2e-3566Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI-----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP RR+SL QK   STS+RK VS DNG +SNGN+           +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI-----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  ------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
               DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLA+EA QKMV
Subjt:  ------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

A0A1S3B5Q1 CBS domain-containing protein CBSCBSPB36.8e-3766.44Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL 
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-

Query:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
              DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

A0A5A7TIR6 CBS domain-containing protein CBSCBSPB36.8e-3766.44Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL 
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-

Query:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
              DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

A0A5D3BXA7 CBS domain-containing protein CBSCBSPB36.8e-3766.44Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL 
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL-

Query:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
              DVAT+VI EGL  EQTVVS+IMTRNPIFVT DSLAIEA QKMV
Subjt:  -----LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

A0A6J1EEQ9 CBS domain-containing protein CBSCBSPB3 isoform X11.6e-3363.58Show/hide
Query:  MTTQLV--PPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANAL
        M+TQL     +RRNS TQK A S S+RK VSADNGS SNGN+          +    +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANA+
Subjt:  MTTQLV--PPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNI----------SCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANAL

Query:  L------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        L       D+AT+VI EGL  EQTVVS+IMTRNPIFV  DSLA+EA QKMV
Subjt:  L------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

SwissProt top hitse value%identityAlignment
P0DH79 CBS domain-containing protein CBSCBSPB51.3e-2152.17Show/hide
Query:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF
        R L S+ +  + +G  S    +  ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL       D+ATKVI + L+LE+T VS++MT+NP+F
Subjt:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF

Query:  VTLDSLAIEAFQKMV
        V  D++A+EA QKMV
Subjt:  VTLDSLAIEAFQKMV

Q0WLC7 CBS domain-containing protein CBSCBSPB41.3e-2152.17Show/hide
Query:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF
        R L S+ +  + +G  S    +  ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL       D+ATKVI + L+LE+T VS++MT+NP+F
Subjt:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF

Query:  VTLDSLAIEAFQKMV
        V  D++A+EA QKMV
Subjt:  VTLDSLAIEAFQKMV

Q9FMV3 CBS domain-containing protein CBSCBSPB11.4e-1853.85Show/hide
Query:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        ++LRL KA T+P  TT+ EAC+RMA+RRVD +LLTD+N +L       D+AT+VI + L++E+T VS++MT+NP+FV  ++LA+EA QKMV
Subjt:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

Q9LF97 CBS domain-containing protein CBSCBSPB32.0e-2551.9Show/hide
Query:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNIS--------------CCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL
        M+TQ   P     RR NS  ++  P   ++K V ++NGS  NGN S                  +  +KLRL KA TIPEGTTV +ACRRMAARRVD  L
Subjt:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNIS--------------CCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL

Query:  LTDANALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        LTD++ALL       DVAT+VI EGL  +QT+VS++MTRNPIFVT DSLA+EA QKMV
Subjt:  LTDANALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

Q9SJQ5 CBS domain-containing protein CBSCBSPB21.4e-2349.67Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNISCCWRK-DS-------------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN
        MTT      RR+  + +   S S + ++ ++   + +G+I+    K DS             +KLRL KA TI EGTTV +ACRRMAARRVD VLLTD++
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNISCCWRK-DS-------------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN

Query:  ALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        ALL       D+AT+VI EGL  E T+VS++MTRNPIFVT DSLAIEA QKMV
Subjt:  ALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

Arabidopsis top hitse value%identityAlignment
AT2G36500.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein1.0e-2449.67Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNISCCWRK-DS-------------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN
        MTT      RR+  + +   S S + ++ ++   + +G+I+    K DS             +KLRL KA TI EGTTV +ACRRMAARRVD VLLTD++
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNISCCWRK-DS-------------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN

Query:  ALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        ALL       D+AT+VI EGL  E T+VS++MTRNPIFVT DSLAIEA QKMV
Subjt:  ALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

AT3G52950.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein1.4e-2651.9Show/hide
Query:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNIS--------------CCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL
        M+TQ   P     RR NS  ++  P   ++K V ++NGS  NGN S                  +  +KLRL KA TIPEGTTV +ACRRMAARRVD  L
Subjt:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNIS--------------CCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL

Query:  LTDANALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        LTD++ALL       DVAT+VI EGL  +QT+VS++MTRNPIFVT DSLA+EA QKMV
Subjt:  LTDANALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

AT3G52950.2 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein1.4e-2651.9Show/hide
Query:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNIS--------------CCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL
        M+TQ   P     RR NS  ++  P   ++K V ++NGS  NGN S                  +  +KLRL KA TIPEGTTV +ACRRMAARRVD  L
Subjt:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNIS--------------CCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL

Query:  LTDANALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV
        LTD++ALL       DVAT+VI EGL  +QT+VS++MTRNPIFVT DSLA+EA QKMV
Subjt:  LTDANALL------LDVATKVILEGLSLEQTVVSRIMTRNPIFVTLDSLAIEAFQKMV

AT5G50530.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein9.4e-2352.17Show/hide
Query:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF
        R L S+ +  + +G  S    +  ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL       D+ATKVI + L+LE+T VS++MT+NP+F
Subjt:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF

Query:  VTLDSLAIEAFQKMV
        V  D++A+EA QKMV
Subjt:  VTLDSLAIEAFQKMV

AT5G50640.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein9.4e-2352.17Show/hide
Query:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF
        R L S+ +  + +G  S    +  ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL       D+ATKVI + L+LE+T VS++MT+NP+F
Subjt:  RKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLL------DVATKVILEGLSLEQTVVSRIMTRNPIF

Query:  VTLDSLAIEAFQKMV
        V  D++A+EA QKMV
Subjt:  VTLDSLAIEAFQKMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCAACTCGTTCCTCCAAGAAGGAGAAACTCCCTCACTCAGAAACACGCTCCTTCCACCTCTAACAGGAAGTTAGTCTCTGCCGATAATGGTAGCACTAGTAA
TGGCAATATCTCCTGTTGCTGGAGAAAGGATAGTGAAAAGTTGAGGTTGTTGAAAGCACATACAATTCCTGAGGGGACTACGGTTTCTGAAGCGTGTAGAAGAATGGCTG
CTCGTCGTGTTGATGTTGTGCTGCTGACAGATGCAAATGCTTTACTTTTAGATGTCGCTACCAAGGTTATATTGGAGGGGCTGAGCCTAGAGCAGACTGTTGTATCGAGA
ATTATGACACGGAATCCCATTTTTGTTACTTTAGATTCACTTGCTATTGAAGCCTTTCAGAAAATGGTTCATGAGGAAGATGACAACGATGAAGAGGAATTAGACATTGA
GGAGGAAAATGGCCAAGGAGGAGCAATGGACGAGACCTTAGACTTAGATGGGGAGGATGATGAGTTTGACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTCAACTCGTTCCTCCAAGAAGGAGAAACTCCCTCACTCAGAAACACGCTCCTTCCACCTCTAACAGGAAGTTAGTCTCTGCCGATAATGGTAGCACTAGTAA
TGGCAATATCTCCTGTTGCTGGAGAAAGGATAGTGAAAAGTTGAGGTTGTTGAAAGCACATACAATTCCTGAGGGGACTACGGTTTCTGAAGCGTGTAGAAGAATGGCTG
CTCGTCGTGTTGATGTTGTGCTGCTGACAGATGCAAATGCTTTACTTTTAGATGTCGCTACCAAGGTTATATTGGAGGGGCTGAGCCTAGAGCAGACTGTTGTATCGAGA
ATTATGACACGGAATCCCATTTTTGTTACTTTAGATTCACTTGCTATTGAAGCCTTTCAGAAAATGGTTCATGAGGAAGATGACAACGATGAAGAGGAATTAGACATTGA
GGAGGAAAATGGCCAAGGAGGAGCAATGGACGAGACCTTAGACTTAGATGGGGAGGATGATGAGTTTGACATTTGA
Protein sequenceShow/hide protein sequence
MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNISCCWRKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLDVATKVILEGLSLEQTVVSR
IMTRNPIFVTLDSLAIEAFQKMVHEEDDNDEEELDIEEENGQGGAMDETLDLDGEDDEFDI