; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G020000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmyb family transcription factor PHL5
Genome locationchr01:26798500..26801606
RNA-Seq ExpressionLsi01G020000
SyntenyLsi01G020000
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR025756 - MYB-CC type transcription factor, LHEQLE-containing domain
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158752.1 protein PHOSPHATE STARVATION RESPONSE 3-like isoform X1 [Momordica charantia]9.4e-4378.99Show/hide
Query:  SATVFCNAGRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDD
        SA +FCNAG+SDRRN ++EV +LD KT MQI++ALQLQLDVQRRLH+QLEIQRKLQLQIEEQGK+LKMMFDQQQETNKCFFRTNGFNKP PN     LDD
Subjt:  SATVFCNAGRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDD

Query:  PPIPTADSVRNAQFPSKIS
        PPI TA+S+RNAQFPS  S
Subjt:  PPIPTADSVRNAQFPSKIS

XP_023544661.1 myb family transcription factor PHL5 [Cucurbita pepo subsp. pepo]3.2e-4385.45Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTADSV
        +SDRRN MNEV ELD KTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGK+LK+MFDQQQETNKCFF  NGFNKP PN  SGYLDDPPIPTA+++
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTADSV

Query:  RNAQFPSKIS
        RNAQFP+ IS
Subjt:  RNAQFPSKIS

XP_038881143.1 myb family transcription factor PHL5-like isoform X1 [Benincasa hispida]6.3e-4790.18Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA--D
        RSDRRNCMNEVTELD+KTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPN +SGYLD+PPIP+   D
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA--D

Query:  SVRNAQFPSKIS
        +++NAQFPSKIS
Subjt:  SVRNAQFPSKIS

XP_038881144.1 myb family transcription factor PHL5-like isoform X2 [Benincasa hispida]6.3e-4790.18Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA--D
        RSDRRNCMNEVTELD+KTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPN +SGYLD+PPIP+   D
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA--D

Query:  SVRNAQFPSKIS
        +++NAQFPSKIS
Subjt:  SVRNAQFPSKIS

XP_038881145.1 myb family transcription factor PHL5-like isoform X3 [Benincasa hispida]6.3e-4790.18Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA--D
        RSDRRNCMNEVTELD+KTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPN +SGYLD+PPIP+   D
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA--D

Query:  SVRNAQFPSKIS
        +++NAQFPSKIS
Subjt:  SVRNAQFPSKIS

TrEMBL top hitse value%identityAlignment
A0A0A0L162 Uncharacterized protein3.0e-4283.33Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNG----FNKPTPN--IVSGYLDDPPI
        R DRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRT      FNKPTPN   V GY+D+PPI
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNG----FNKPTPN--IVSGYLDDPPI

Query:  PT----ADSVRNAQFPSKIS
        PT     D++RNAQFPSKIS
Subjt:  PT----ADSVRNAQFPSKIS

A0A1S3B500 uncharacterized protein LOC103486080 isoform X12.1e-4086.21Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFR---TNG-FNKPTP--NIVSGYLDDPPI
        R DRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFR   TNG FNKPTP  + VSGYLD+ PI
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFR---TNG-FNKPTP--NIVSGYLDDPPI

Query:  PTADSVRNAQFPSKIS
        PT     NAQFPSKIS
Subjt:  PTADSVRNAQFPSKIS

A0A1S3B5M5 protein PHR1-LIKE 1 isoform X22.1e-4086.21Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFR---TNG-FNKPTP--NIVSGYLDDPPI
        R DRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFR   TNG FNKPTP  + VSGYLD+ PI
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFR---TNG-FNKPTP--NIVSGYLDDPPI

Query:  PTADSVRNAQFPSKIS
        PT     NAQFPSKIS
Subjt:  PTADSVRNAQFPSKIS

A0A6J1DY13 protein PHOSPHATE STARVATION RESPONSE 3-like isoform X14.6e-4378.99Show/hide
Query:  SATVFCNAGRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDD
        SA +FCNAG+SDRRN ++EV +LD KT MQI++ALQLQLDVQRRLH+QLEIQRKLQLQIEEQGK+LKMMFDQQQETNKCFFRTNGFNKP PN     LDD
Subjt:  SATVFCNAGRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDD

Query:  PPIPTADSVRNAQFPSKIS
        PPI TA+S+RNAQFPS  S
Subjt:  PPIPTADSVRNAQFPSKIS

A0A6J1HW70 myb family transcription factor PHL55.0e-4283.64Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTADSV
        +SDRRN MNEV ELD KTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGK+LK+MFDQQQETNKCFF  NGFNKP PN  SGYLDDPPIP A+++
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTADSV

Query:  RNAQFPSKIS
        RNAQF + IS
Subjt:  RNAQFPSKIS

SwissProt top hitse value%identityAlignment
F4J3P7 Myb family transcription factor PHL132.2e-1044.32Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQ---QETNKCFFRTNGFNKPTPNIVSGYLDDP
        + ++  LD KT+++I +AL+LQ+ VQ++LH+QLEIQR LQLQIEEQG+ L+MM ++Q   QE  K    ++   +  P+  S  L  P
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQ---QETNKCFFRTNGFNKPTPNIVSGYLDDP

Q0WVU3 Myb family transcription factor PHL53.7e-1850Show/hide
Query:  GRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIP
        G+ ++R C  E+++LD +T +QIK+ALQLQLDVQR LH+QLEIQR LQL+IEEQGKQLKMM +QQQ+  +   +     + + +++  ++  PP P
Subjt:  GRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIP

Q8GUN5 Protein PHR1-LIKE 17.6e-1157.63Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE
        + ++  LD KT+++I  AL+LQ++VQ+RLH+QLEIQR LQLQIE+QG+ L+MMF++QQ+
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE

Q94CL7 Protein PHOSPHATE STARVATION RESPONSE 11.4e-0957.89Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQ
        +  +T LD K  + I +AL+LQ++VQ++LH+QLEIQR LQL+IEEQGK L+MMF++Q
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQ

Q9SJW0 Myb family transcription factor PHL71.1e-0939Show/hide
Query:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNG-FNKPTPNIVSGYLDDPPIPTADS
        ++D++   + ++ LD  + MQI +AL+LQ++VQ+RLH+QLE+QR+LQL+IE QGK LK + ++QQ       R +G   +P+  +        P PT++S
Subjt:  RSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNG-FNKPTPNIVSGYLDDPPIPTADS

Arabidopsis top hitse value%identityAlignment
AT3G04450.1 Homeodomain-like superfamily protein1.6e-1144.32Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQ---QETNKCFFRTNGFNKPTPNIVSGYLDDP
        + ++  LD KT+++I +AL+LQ+ VQ++LH+QLEIQR LQLQIEEQG+ L+MM ++Q   QE  K    ++   +  P+  S  L  P
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQ---QETNKCFFRTNGFNKPTPNIVSGYLDDP

AT5G06800.1 myb-like HTH transcriptional regulator family protein2.7e-1950Show/hide
Query:  GRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIP
        G+ ++R C  E+++LD +T +QIK+ALQLQLDVQR LH+QLEIQR LQL+IEEQGKQLKMM +QQQ+  +   +     + + +++  ++  PP P
Subjt:  GRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIP

AT5G29000.1 Homeodomain-like superfamily protein5.4e-1257.63Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE
        + ++  LD KT+++I  AL+LQ++VQ+RLH+QLEIQR LQLQIE+QG+ L+MMF++QQ+
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE

AT5G29000.2 Homeodomain-like superfamily protein5.4e-1257.63Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE
        + ++  LD KT+++I  AL+LQ++VQ+RLH+QLEIQR LQLQIE+QG+ L+MMF++QQ+
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE

AT5G29000.3 Homeodomain-like superfamily protein5.4e-1257.63Show/hide
Query:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE
        + ++  LD KT+++I  AL+LQ++VQ+RLH+QLEIQR LQLQIE+QG+ L+MMF++QQ+
Subjt:  MNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATCTCTTCAGCAACAGTGTTTTGTAATGCAGGGAGGTCTGATAGAAGGAACTGCATGAATGAAGTTACCGAACTGGATGCCAAAACTGCCATGCAAATTAAAGA
CGCCTTGCAACTGCAGCTAGATGTACAGAGGCGTCTTCATGATCAATTGGAGATACAGAGGAAGCTACAGTTGCAAATTGAAGAACAAGGGAAACAACTTAAGATGATGT
TTGATCAACAACAGGAAACTAACAAATGTTTCTTCAGAACTAATGGATTCAACAAACCAACTCCTAATATCGTGTCGGGTTATCTGGACGATCCTCCGATCCCGACAGCC
GACAGCGTCCGAAATGCCCAATTCCCGTCCAAGATAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACATCTCTTCAGCAACAGTGTTTTGTAATGCAGGGAGGTCTGATAGAAGGAACTGCATGAATGAAGTTACCGAACTGGATGCCAAAACTGCCATGCAAATTAAAGA
CGCCTTGCAACTGCAGCTAGATGTACAGAGGCGTCTTCATGATCAATTGGAGATACAGAGGAAGCTACAGTTGCAAATTGAAGAACAAGGGAAACAACTTAAGATGATGT
TTGATCAACAACAGGAAACTAACAAATGTTTCTTCAGAACTAATGGATTCAACAAACCAACTCCTAATATCGTGTCGGGTTATCTGGACGATCCTCCGATCCCGACAGCC
GACAGCGTCCGAAATGCCCAATTCCCGTCCAAGATAAGTTAGACCATGAAAAACCATCTTTTTCTTCATCACCAATTACCAGTACATAAAATCACTCATTGGGGGGTTCC
TGTTTTCTTTCAAACTTCTGACAATGGACATTGCAGATTGAAAAAAAGCCTTTTATTCTCTGCACAGATAAATCTAAACAAAGTAAAAAGGGGTAAAGATTACTGAGTGT
TGTTGAATATACAAACTTTTTGAAAGTTGAATTAGCCATGGATTTTGTTGTGTTAATTTGTCAGTTCTAAGTTGTGAATTAAACTATTTTACCAACAGAAAAATGATAAT
TGTTTTATC
Protein sequenceShow/hide protein sequence
MNISSATVFCNAGRSDRRNCMNEVTELDAKTAMQIKDALQLQLDVQRRLHDQLEIQRKLQLQIEEQGKQLKMMFDQQQETNKCFFRTNGFNKPTPNIVSGYLDDPPIPTA
DSVRNAQFPSKIS