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Lsi01G020060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMajor pollen allergen Ole e 6-like
Genome locationchr01:27264730..27359360
RNA-Seq ExpressionLsi01G020060
SyntenyLsi01G020060
Gene Ontology termsNA
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035393.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]1.1e-0653.33Show/hide
Query:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEV
        +R+ E   R K   L +++S+  PQ+KSC+ETCEKACIA+  ANT CHSTC + C+ KEV
Subjt:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEV
KAA0036015.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]8.4e-0751.52Show/hide
Query:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEVTLRNND
        ER+ E   R K   L +++S   PQ+KSC+ETC KACIA+ SANT CHSTC + C+ KEV  + +D
Subjt:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEVTLRNND
TrEMBL top hitse value%identityAlignment
A0A5A7SXV7 Major pollen allergen Ole e 6-like5.3e-0753.33Show/hide
Query:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEV
        +R+ E   R K   L +++S+  PQ+KSC+ETCEKACIA+  ANT CHSTC + C+ KEV
Subjt:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEV
A0A5A7T3F9 Major pollen allergen Ole e 6-like4.1e-0751.52Show/hide
Query:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEVTLRNND
        ER+ E   R K   L +++S   PQ+KSC+ETC KACIA+ SANT CHSTC + C+ KEV  + +D
Subjt:  ERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEVTLRNND
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTATCCACCTCAGAGCCTCAATACAAATCATGTTTAGAAACCTGCGAGAAAGCATGCATCGCGAAAGGCAGTGCCAACACTTTGTGTCATAATACATGCGGTGA
ATATTGCATACAAAAAGAAGTGACTTTGAGAAATAATGATCTGAAAGAGAAGGAGCGAGAGAATGAGTCATTTTGGAGACACAAAAACGTAAAATTGAACAACAAGGTAT
CCACCTCAGAGCCTCAATACAAATCATGTTTAGAAACATGCGAGAAAGCATGCATCGCGAGAGGCAGTGCCAACACTTTGTGTCATTCTACATGCAGTGAATATTGCATA
CCAAAAGAAGTGACTTTGAGAAATAATGATCTGAAAGAGAAGGAGCGAGAGAATGAGTCATTTTGTAGACACAAAAACGTAAAATTGAACAACAAGGTATCCACGTCAGA
GCCTCAATACAAATCATGTTTAGAAACATGCGAGAAAGCATGCATCGCGAGAGGCAGTGCCAACACTTTGTGTCATTCTACATGCGCAAGTCATCTAACATCCTTACCTT
ATGTTGACGGCAGAGGGCTTGATGGCCAACGACTATTGAGCTTGCAATATTTAGGGTCTGCGACCGTTGAATCTTTGAGCCATGAGATCAAGCCGAATGGTGGACGAAGC
TGGAACGCCAAACTCGTATCCACCTCAGAGCCTCAATACAAATCATGTTTAGAAACATGCGAGAAAGCATGCATCGCGAGAGGCAGTGCCAACACTTTGTGTCATTCTAC
ATGCAGTGAATATTGCATACCAAAAGAAATAAACTCAAGACCTAACTACCCCATTGATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTATCCACCTCAGAGCCTCAATACAAATCATGTTTAGAAACCTGCGAGAAAGCATGCATCGCGAAAGGCAGTGCCAACACTTTGTGTCATAATACATGCGGTGA
ATATTGCATACAAAAAGAAGTGACTTTGAGAAATAATGATCTGAAAGAGAAGGAGCGAGAGAATGAGTCATTTTGGAGACACAAAAACGTAAAATTGAACAACAAGGTAT
CCACCTCAGAGCCTCAATACAAATCATGTTTAGAAACATGCGAGAAAGCATGCATCGCGAGAGGCAGTGCCAACACTTTGTGTCATTCTACATGCAGTGAATATTGCATA
CCAAAAGAAGTGACTTTGAGAAATAATGATCTGAAAGAGAAGGAGCGAGAGAATGAGTCATTTTGTAGACACAAAAACGTAAAATTGAACAACAAGGTATCCACGTCAGA
GCCTCAATACAAATCATGTTTAGAAACATGCGAGAAAGCATGCATCGCGAGAGGCAGTGCCAACACTTTGTGTCATTCTACATGCGCAAGTCATCTAACATCCTTACCTT
ATGTTGACGGCAGAGGGCTTGATGGCCAACGACTATTGAGCTTGCAATATTTAGGGTCTGCGACCGTTGAATCTTTGAGCCATGAGATCAAGCCGAATGGTGGACGAAGC
TGGAACGCCAAACTCGTATCCACCTCAGAGCCTCAATACAAATCATGTTTAGAAACATGCGAGAAAGCATGCATCGCGAGAGGCAGTGCCAACACTTTGTGTCATTCTAC
ATGCAGTGAATATTGCATACCAAAAGAAATAAACTCAAGACCTAACTACCCCATTGATAATTGACCATGAAATTAAAGCAGAGATCTGAAAAATGATCGGATAATGTAGA
AGGTCAAGTATAAATTATTTGAATAACATTTCAGAAAGAAAAATCTAAATTTCCTTTATCCTCTTTCATTATTGTCATCCAAATTTGTTGTTTCCTTATACAAAGGTTTT
ATCTTTTGTATCATCGAGGTTTTTTCATCATTATTTTCAACGAGATCAATAAAGTTCAATTAATCTT
Protein sequenceShow/hide protein sequence
MAVSTSEPQYKSCLETCEKACIAKGSANTLCHNTCGEYCIQKEVTLRNNDLKEKERENESFWRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCI
PKEVTLRNNDLKEKERENESFCRHKNVKLNNKVSTSEPQYKSCLETCEKACIARGSANTLCHSTCASHLTSLPYVDGRGLDGQRLLSLQYLGSATVESLSHEIKPNGGRS
WNAKLVSTSEPQYKSCLETCEKACIARGSANTLCHSTCSEYCIPKEINSRPNYPIDN