| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 5.7e-178 | 91.78 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
K GEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAA+TRKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| XP_038894178.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 [Benincasa hispida] | 1.4e-176 | 90.93 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| XP_038894194.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X2 [Benincasa hispida] | 1.4e-176 | 90.93 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| XP_038894195.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X3 [Benincasa hispida] | 1.4e-176 | 90.93 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| XP_038894196.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X4 [Benincasa hispida] | 1.4e-176 | 90.93 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 2.8e-178 | 91.78 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
K GEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAA+TRKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| A0A6J1DNY2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 3.9e-172 | 88.67 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVF+PSDPTS SKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGE AQA SER VA FPHEQLSK EMELRM+CLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD+SKKSKQL+GFK+SMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITES NE Y+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| A0A6J1DRT9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 3.9e-172 | 88.67 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVF+PSDPTS SKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGE AQA SER VA FPHEQLSK EMELRM+CLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD+SKKSKQL+GFK+SMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITES NE Y+RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| A0A6J1EXP7 probable RNA polymerase II transcription factor B subunit 1-1 | 3.9e-172 | 89.52 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGEA QAPSE+ VA FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD S KSKQL+GFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIR VDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDYTHLPDHGIFRDGGKEITES NE +RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| A0A6J1IB04 probable RNA polymerase II transcription factor B subunit 1-1 | 1.9e-171 | 89.24 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
KSGEA QAPSE+ VA FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLLERD S KSKQL+GFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQR
Query: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
N+V F++ IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIR VDPTLDL
Subjt: FIPGFNEVVFDIR-----GIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDL
Query: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
EADLGDDY HLPDHGIFRDGGKEITES NE +RTLSQDLNRQGAVVLEGRTI
Subjt: EADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| SwissProt top hits | e value | %identity | Alignment |
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| P32780 General transcription factor IIH subunit 1 | 6.5e-15 | 27.96 | Show/hide |
Query: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
IK K + EG K L L G + F F N S K +A + ++ + F ++ + E+E + R LQED L +L+K V+S
Subjt: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
Query: VLTESEFWAARKKLLERDSSKKS--KQLIGFKSSMVLDTKPMSDGRLISQRFIPGFNEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYL
V++ EFWA R + DSS S KQ +G ++ + D +P +DG + +N I IF PAV + +VP+ M+EK+FWT++F++ Y
Subjt: VLTESEFWAARKKLLERDSSKKS--KQLIGFKSSMVLDTKPMSDGRLISQRFIPGFNEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYL
Query: HSTKNSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLN
H + + + AE A+ +E L +T + +P LDL A D G + +P I + I + N H L+ L
Subjt: HSTKNSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLN
Query: RQGA
+Q A
Subjt: RQGA
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 7.7e-109 | 60.87 | Show/hide |
Query: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
+ + KYK++VKDPGTPG L + E +F P+DP S SKL V + IK K TKEGSNKPPWLNLT Q S+IFEF+N+ D+H CR+F+ ALAK
Subjt: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
Query: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRL--ISQRFIP
+ + V + EQLS E+ELR + L+E+SELQ+LHKQFV S VLTE EFWA RKKLL +DS +KSKQ +G KS MV KP +DGR ++ P
Subjt: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRL--ISQRFIP
Query: GFNEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
E++F IFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK DEILA ETR KIR VDPTLD+EAD GDDY
Subjt: GFNEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
Query: THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
THL DHGI RDG ++ E QN+ +KR+L QDLNR AVVLEGR+I
Subjt: THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| Q55FP1 General transcription factor IIH subunit 1 | 3.3e-19 | 28.38 | Show/hide |
Query: LSKSEMELRMRCLQEDSELQKLHKQFVISG-VLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSD-GRLISQRFIPGFNEVVFDIRGIFALK
LS+ +++ R+ LQ + EL++L++Q V V++ES+FW +RK +L+ DS++ KQ G S+++ D +P S+ + RF P I IF
Subjt: LSKSEMELRMRCLQEDSELQKLHKQFVISG-VLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSD-GRLISQRFIPGFNEVVFDIRGIFALK
Query: PAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEI
P+V +A+ +VP K+SE++FW KY +++Y + ++S A A +D+ + + D++ ++K+ ++P +DL + G D +G+ D ++
Subjt: PAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEI
Query: TESQNEHYKRTLSQDLNRQGAVVLEGRTI
+ + L + NR A+VL + +
Subjt: TESQNEHYKRTLSQDLNRQGAVVLEGRTI
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| Q9DBA9 General transcription factor IIH subunit 1 | 1.9e-14 | 27.72 | Show/hide |
Query: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
IK K + EG K L L G + F F N S K +A + ++ + F ++ + E+E + R LQED L +L+K V+S
Subjt: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
Query: VLTESEFWAARKKLLERDSSKKS-KQLIGFKSSMVLDTKPMSDGRLISQRFIPGFNEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLH
V++ EFWA R + DSS S KQ +G ++ + D +P +DG + +N I IF PAV + VP+ M+EK+FWT++F++ Y H
Subjt: VLTESEFWAARKKLLERDSSKKS-KQLIGFKSSMVLDTKPMSDGRLISQRFIPGFNEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLH
Query: STKNSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNR
+ + + AE A+ +E L +T + +P LDL + D G + +P I + I + N H L+ L +
Subjt: STKNSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNR
Query: QGA
Q A
Subjt: QGA
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 4.2e-107 | 61.22 | Show/hide |
Query: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
+ + KYK+ VKDPGT G LE++E +F P+DP S KL V+ IK K TKEGSNKPPWLNLT QG S+IFEF+N+ D+H CR+F+ ALAK E
Subjt: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
Query: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQRFIPGF
+ V P EQLS +E ELR + L+E+SELQKLHKQFV S VLTE EFW+ RKKLL +DS +KSKQ +G KS MV KP +DGR F
Subjt: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRLISQRFIPGF
Query: NEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTH
+E++F IFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK DEILA E R+K+R VDPTLD++AD GDDYTH
Subjt: NEVVFDIRGIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTH
Query: LPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
L DHGI RDG +I E QN+ KR+L QDLNR AVVLEGR I
Subjt: LPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTI
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