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Lsi01G020170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAlcohol dehydrogenase
Genome locationchr01:27562268..27562471
RNA-Seq ExpressionLsi01G020170
SyntenyLsi01G020170
Gene Ontology termsGO:0010033 - response to organic substance (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062426.1 alcohol dehydrogenase [Cucumis melo var. makuwa]1.8e-2797.01Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEV PGDS+AIIGIGGVGSR
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR

XP_004142661.1 uncharacterized protein LOC101207246 [Cucumis sativus]6.1e-28100Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

XP_008449387.1 PREDICTED: alcohol dehydrogenase [Cucumis melo]6.7e-2796.97Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEV PGDS+AIIGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

XP_022158376.1 alcohol dehydrogenase 1B [Momordica charantia]1.1e-2696.97Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGGLAEYCVTPA+GVSILPKSLPYTESAILGCAVFTAYGAMAHAAEV+PGDSVAIIGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

XP_038903768.1 alcohol dehydrogenase [Benincasa hispida]8.0e-2898.48Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDS+AIIGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

TrEMBL top hitse value%identityAlignment
A0A0A0L305 Oxidoreductase7.8e-29100Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR

A0A1S3BLX2 alcohol dehydrogenase3.3e-2796.97Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEV PGDS+AIIGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

A0A5A7V7N1 Alcohol dehydrogenase8.6e-2897.01Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR
        MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEV PGDS+AIIGIGGVGSR
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR

A0A6A1V7A8 Succinate-semialdehyde dehydrogenase (Acetylating)2.1e-2691.04Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR
        MYSMGGLAEYCV PAH +SILP SLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVA+IG+GGVGSR
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR

A0A6J1E0R2 alcohol dehydrogenase 1B5.6e-2796.97Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGGLAEYCVTPA+GVSILPKSLPYTESAILGCAVFTAYGAMAHAAEV+PGDSVAIIGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

SwissProt top hitse value%identityAlignment
A4YGN0 Succinate-semialdehyde dehydrogenase (acetylating)4.3e-0842.62Show/hide
Query:  GGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        GG AEY +   + ++ +P+ +   + A+LGCA  T YGA++ ++++ PGD+VA+IG+GGVG
Subjt:  GGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

O97764 Zeta-crystallin4.7e-0746.77Show/hide
Query:  GGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGI-GGVG
        GG AEY +   H V  LP+ L + + A +G   FTAY A+ H+A V+PG+SV + G  GGVG
Subjt:  GGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGI-GGVG

P9WQC6 Alcohol dehydrogenase B9.5e-0841.54Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        M  +G  + Y V     V  +  S+P+  + ++GC V T YG+    A+VRPGD VAI+G+GGVG
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

P9WQC7 Alcohol dehydrogenase B9.5e-0841.54Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        M  +G  + Y V     V  +  S+P+  + ++GC V T YG+    A+VRPGD VAI+G+GGVG
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

Q7U1B9 Alcohol dehydrogenase B9.5e-0841.54Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        M  +G  + Y V     V  +  S+P+  + ++GC V T YG+    A+VRPGD VAI+G+GGVG
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

Arabidopsis top hitse value%identityAlignment
AT1G22430.1 GroES-like zinc-binding dehydrogenase family protein3.8e-0439.68Show/hide
Query:  MGGLAEYCVTP-AHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        +   +EY V   AH V I P+ +P  ++A+L C V T  GA    A V  G ++AI G+G VG
Subjt:  MGGLAEYCVTP-AHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

AT5G43940.1 GroES-like zinc-binding dehydrogenase family protein2.9e-0437.93Show/hide
Query:  AEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        ++Y V     V+ +  + P  +  +LGC V T  GA+ + A+V PG +VAI G+G VG
Subjt:  AEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

AT5G43940.2 GroES-like zinc-binding dehydrogenase family protein2.9e-0437.93Show/hide
Query:  AEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG
        ++Y V     V+ +  + P  +  +LGC V T  GA+ + A+V PG +VAI G+G VG
Subjt:  AEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVG

AT5G63620.1 GroES-like zinc-binding alcohol dehydrogenase family protein5.9e-2986.36Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGG+AEYCVTPAHG++ LP+SLPY+ESAILGCAVFTAYGAMAHAAE+RPGDS+A+IGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS

AT5G63620.2 GroES-like zinc-binding alcohol dehydrogenase family protein5.9e-2986.36Show/hide
Query:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS
        MYSMGG+AEYCVTPAHG++ LP+SLPY+ESAILGCAVFTAYGAMAHAAE+RPGDS+A+IGIGGVGS
Subjt:  MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAGTATGGGAGGTCTTGCTGAATATTGTGTCACTCCAGCGCATGGAGTGTCAATTTTACCAAAATCGTTACCATACACAGAGTCGGCAATTCTAGGATGTGCAGT
TTTTACTGCATATGGTGCCATGGCCCATGCTGCTGAAGTGCGCCCTGGGGATTCTGTTGCTATTATTGGAATTGGAGGTGTTGGTTCAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAGTATGGGAGGTCTTGCTGAATATTGTGTCACTCCAGCGCATGGAGTGTCAATTTTACCAAAATCGTTACCATACACAGAGTCGGCAATTCTAGGATGTGCAGT
TTTTACTGCATATGGTGCCATGGCCCATGCTGCTGAAGTGCGCCCTGGGGATTCTGTTGCTATTATTGGAATTGGAGGTGTTGGTTCAAGGTAA
Protein sequenceShow/hide protein sequence
MYSMGGLAEYCVTPAHGVSILPKSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAIIGIGGVGSR