; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G020230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranslation factor GUF1 homolog, chloroplastic
Genome locationchr01:27653639..27661876
RNA-Seq ExpressionLsi01G020230
SyntenyLsi01G020230
Gene Ontology termsGO:0045727 - positive regulation of translation (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR006297 - Elongation factor 4
IPR035647 - EF-G domain III/V-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOX94145.1 Small GTP-binding protein isoform 1 [Theobroma cacao]3.1e-6691.37Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        +++    G VGYLSASIRSVADARVGDTITHYGR+AE SLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVIS
        LHMEIVQERLEREYNLSLITTAPSVVYRVNC+NGDTVIS
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVIS

XP_011653860.1 translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus]3.1e-6693.43Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

XP_031740277.1 translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus]3.1e-6693.43Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

XP_031740279.1 translation factor GUF1 homolog, chloroplastic isoform X5 [Cucumis sativus]3.1e-6693.43Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

XP_038889419.1 translation factor GUF1 homolog, chloroplastic [Benincasa hispida]2.3e-6693.43Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITHYGRKA+DSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

TrEMBL top hitse value%identityAlignment
A0A061DN87 Translation factor GUF1 homolog, chloroplastic1.5e-6691.37Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        +++    G VGYLSASIRSVADARVGDTITHYGR+AE SLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVIS
        LHMEIVQERLEREYNLSLITTAPSVVYRVNC+NGDTVIS
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVIS

A0A061DQ14 Translation factor GUF1 homolog, mitochondrial1.3e-6591.24Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        +++    G VGYLSASIRSVADARVGDTITHYGR+AE SLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNC+NGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

A0A0A0KYH8 Translation factor GUF1 homolog, mitochondrial1.5e-6693.43Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic3.3e-6692.7Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITH+GRKAEDSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETS+AMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic1.6e-6591.97Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        E++    G VGYLSASIRSVADARVGDTITH+ RKAEDSLPGYEE TPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNG+TV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

SwissProt top hitse value%identityAlignment
A5B4D2 Translation factor GUF1 homolog, chloroplastic6.4e-6793.08Show/hide
Query:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ
        G VGYL+ASIRSVADARVGDTITHYGRKAE+SLPGYEE TPMVFCGLFPVDAD+FP+LRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEI+Q
Subjt:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ

Query:  ERLEREYNLSLITTAPSVVYRVNCVNGDTV
        ERLEREYNL+LITTAPSVVYRVNC+NGDTV
Subjt:  ERLEREYNLSLITTAPSVVYRVNCVNGDTV

A9RFQ5 Translation factor GUF1 homolog, chloroplastic1.3e-5678.83Show/hide
Query:  IDQEIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGF
        I   +     G VGYLSASI+SVADARVGDTIT   RKA  +LPGY+  TPMVFCGLFP+DADQF ELR+ALEKLQLNDAAL+FEPETSSAMGFGFRCGF
Subjt:  IDQEIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGF

Query:  LGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNG
        LGLLHMEIVQERLEREY L LITTAPSVVYRV+C +G
Subjt:  LGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNG

B9GHA6 Translation factor GUF1 homolog, chloroplastic5.1e-6487.59Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        +++    G VGYLSASIRSVADARVGDTITHY RKAE SLPGYEE TPMVFCGLFPVDADQF ELRDALEKLQLNDAALKFEPETS+AMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRV+CV+ D V
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

B9RHQ5 Translation factor GUF1 homolog, chloroplastic7.1e-6688.32Show/hide
Query:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
        +++    G VGYLSASIRSVADARVGDTITHY R+A+ SLPGY+E TPMVFCGLFPVDADQFPE+RDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL
Subjt:  EIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGL

Query:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV
        LHMEIVQERLEREYNLSLITTAPSVVYRVNCV+GDTV
Subjt:  LHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTV

Q9FNM5 Translation factor GUF1 homolog, chloroplastic6.0e-6590.84Show/hide
Query:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ
        G VGY++AS+RSVADARVGDTITHY RKAE SLPGYEE TPMVFCGLFPVDADQFP+LRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ
Subjt:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ

Query:  ERLEREYNLSLITTAPSVVYRVNCVNGDTVI
        ERLEREYNL+LITTAPSVVYRVN VNGDT +
Subjt:  ERLEREYNLSLITTAPSVVYRVNCVNGDTVI

Arabidopsis top hitse value%identityAlignment
AT5G08650.1 Small GTP-binding protein4.2e-6690.84Show/hide
Query:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ
        G VGY++AS+RSVADARVGDTITHY RKAE SLPGYEE TPMVFCGLFPVDADQFP+LRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ
Subjt:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ

Query:  ERLEREYNLSLITTAPSVVYRVNCVNGDTVI
        ERLEREYNL+LITTAPSVVYRVN VNGDT +
Subjt:  ERLEREYNLSLITTAPSVVYRVNCVNGDTVI

AT5G39900.1 Small GTP-binding protein9.3e-2945.67Show/hide
Query:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ
        G+VGY+   +R+  +AR+GDTI +  +   + LPG++ V  MVF G++P D   F  L  A+EKL  NDA++    ETS+A+G GFRCGFLGLLHM++  
Subjt:  GRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQ

Query:  ERLEREYNLSLITTAPSVVYRVNCVNG
        +RLE+EY   +I+T P+V Y     +G
Subjt:  ERLEREYNLSLITTAPSVVYRVNCVNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCGGTAGAGACTGTCGTGATTGACATCAAGAATGAAGTTGGAAAATTACGTTTGATGCTGGCGCAAATTCTACAAAAACTGGATGTACAAAATCAAACAATTGA
TCAAGAAATACAAAATAAGACAATCGGAAGGGTTGGCTATCTTTCAGCTTCTATAAGATCAGTAGCTGATGCAAGAGTTGGCGACACCATTACTCACTATGGCAGAAAGG
CCGAAGACTCCCTACCTGGATATGAGGAGGTCACTCCAATGGTATTCTGTGGCCTTTTTCCGGTTGATGCAGACCAGTTCCCAGAGTTACGTGATGCCCTTGAAAAGCTA
CAACTTAATGACGCTGCGTTGAAGTTTGAGCCTGAAACATCAAGTGCAATGGGTTTTGGCTTCAGATGTGGTTTCCTGGGTCTTCTCCACATGGAAATCGTCCAGGAAAG
ACTTGAAAGGGAATACAACCTGAGCCTGATAACAACCGCACCAAGCGTTGTATACAGAGTTAACTGTGTAAACGGTGATACTGTAATTTCTCCTCTATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCGGTAGAGACTGTCGTGATTGACATCAAGAATGAAGTTGGAAAATTACGTTTGATGCTGGCGCAAATTCTACAAAAACTGGATGTACAAAATCAAACAATTGA
TCAAGAAATACAAAATAAGACAATCGGAAGGGTTGGCTATCTTTCAGCTTCTATAAGATCAGTAGCTGATGCAAGAGTTGGCGACACCATTACTCACTATGGCAGAAAGG
CCGAAGACTCCCTACCTGGATATGAGGAGGTCACTCCAATGGTATTCTGTGGCCTTTTTCCGGTTGATGCAGACCAGTTCCCAGAGTTACGTGATGCCCTTGAAAAGCTA
CAACTTAATGACGCTGCGTTGAAGTTTGAGCCTGAAACATCAAGTGCAATGGGTTTTGGCTTCAGATGTGGTTTCCTGGGTCTTCTCCACATGGAAATCGTCCAGGAAAG
ACTTGAAAGGGAATACAACCTGAGCCTGATAACAACCGCACCAAGCGTTGTATACAGAGTTAACTGTGTAAACGGTGATACTGTAATTTCTCCTCTATCCTAAGACTTAT
ACTTCATTATCTTATGGTAGTTGGAAGAATGTAAATAGTATGTACTTACTACTTGCTGTAATTGTGAATCTAGAGCAACGTGATTTAGATAGTTCTCTGCACGTGCTAAA
AAAACTTGATGACGCACAAAATTTGATTTGCAAAACCCAAAAGCTTGGATTGAGTTTGCGTGATAAGCTTGTTTCTATAGTTGTTTTTGGTAACTTTTGAACATTAGTCT
TTTCATTTCATCAATAAAAAGTTTCATTGCTTGTTAAAAAAAAAATAAGTCGGACCAAAATAGGTTGGTTTAGTTCACGAATTCTAAAGCTAGTTAAGGTGAATCAATCC
AAATCTGTTAATT
Protein sequenceShow/hide protein sequence
MTSVETVVIDIKNEVGKLRLMLAQILQKLDVQNQTIDQEIQNKTIGRVGYLSASIRSVADARVGDTITHYGRKAEDSLPGYEEVTPMVFCGLFPVDADQFPELRDALEKL
QLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVISPLS