; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G020290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA exonuclease 4
Genome locationchr01:27781797..27789597
RNA-Seq ExpressionLsi01G020290
SyntenyLsi01G020290
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013087 - Zinc finger C2H2-type
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142658.1 apoptosis-enhancing nuclease isoform X2 [Cucumis sativus]3.2e-12287.55Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        SDHDP K  SLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHL              EQGCGLCLRVLDGP SLS+HQDICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        +TAPVHQGTSL PTDLSDCY+EDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIF+TFVQPQIPITNYR+  EVTGLKEEHMRYAMPLK V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVL++LLNGESIGRLRLNGGKA+LLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

XP_011653750.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus]5.3e-13392.77Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        SDHDP K  SLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHL GPLSKSNCSKIFSEQGCGLCLRVLDGP SLS+HQDICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        +TAPVHQGTSL PTDLSDCY+EDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIF+TFVQPQIPITNYR+  EVTGLKEEHMRYAMPLK V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVL++LLNGESIGRLRLNGGKA+LLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

XP_016901860.1 PREDICTED: uncharacterized protein LOC103495972 [Cucumis melo]1.1e-12588.35Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        S HDP K  SLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLRE+L GPLSKS+CSKIFSEQGCGLCLRVLD P +LSEH +ICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        +TAPVHQGTSLLPTDLSDCY+EDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVDE EKLIF+TFVQPQIPITNYR+  EVTGLKEEH+RYAMPL+ V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVL++LLNGESIGRLR NGGKA+LLVGHDLEHDLD LR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

XP_022155663.1 apoptosis-enhancing nuclease isoform X1 [Momordica charantia]1.0e-12386.75Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        SD DP    + RHKCSACYKQYKKKEHLIEHM+VSYHS+HQPRCGVC KHCKSFESLREHL+GPLSKSNCSKIF EQGCGLCLRVLDG  SL+EH+DICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        LTAPVHQGTSLLPTDLSDCYDEDRSDR LGAIA+DCVMAGGGSDG LD+CV +CLVDE+EKLIF+TFV+PQIPITNYR+  EVTGL EEHMRYAMPLK+V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVLRIL+NGESIGRLRLNGG+ARLLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

XP_038877619.1 uncharacterized protein LOC120069877 isoform X1 [Benincasa hispida]4.7e-12991.16Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        SDHDP K  SLRHKCSACYKQYKKK+HLIEHMRVSYHSVHQPRCGVCLKH KSFESLREHLKGPL KSNCSKIFSE+GCGLCLRVLDGPGSLSEHQ+ICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        LTAPVHQG SLLPTDLSDCY EDRSDRG GAIA+DCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYR+  EVTGLKEEHMR+A+PLK V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVL+ILLNGESI RLR NGGKARLLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

TrEMBL top hitse value%identityAlignment
A0A1S4E1J6 uncharacterized protein LOC1034959725.2e-12688.35Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        S HDP K  SLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLRE+L GPLSKS+CSKIFSEQGCGLCLRVLD P +LSEH +ICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        +TAPVHQGTSLLPTDLSDCY+EDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVDE EKLIF+TFVQPQIPITNYR+  EVTGLKEEH+RYAMPL+ V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVL++LLNGESIGRLR NGGKA+LLVGHDLEHDLD LR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

A0A6J1DNJ6 RNA exonuclease 44.9e-12486.75Show/hide
Query:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC
        SD DP    + RHKCSACYKQYKKKEHLIEHM+VSYHS+HQPRCGVC KHCKSFESLREHL+GPLSKSNCSKIF EQGCGLCLRVLDG  SL+EH+DICC
Subjt:  SDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICC

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV
        LTAPVHQGTSLLPTDLSDCYDEDRSDR LGAIA+DCVMAGGGSDG LD+CV +CLVDE+EKLIF+TFV+PQIPITNYR+  EVTGL EEHMRYAMPLK+V
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKV

Query:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        QEKVLRIL+NGESIGRLRLNGG+ARLLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  QEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

A0A6J1ETD0 RNA exonuclease 44.7e-11988.02Show/hide
Query:  KLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQ
        K  LRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLD   SL  HQDIC LTAPV Q
Subjt:  KLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQ

Query:  GTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRI
        GTSLLPTDLSDCYDEDRSDRGLGAIA+DCVMAGGGSDG LDIC+ ICLVDEDEKLIF+TFVQP IPITNYR+  EVTGL EE +RYAMPLK+VQEKVL+I
Subjt:  GTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRI

Query:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        LLNGE+I RLRLNGGKARLLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

A0A6J1EYI8 RNA exonuclease 44.7e-11988.02Show/hide
Query:  KLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQ
        K  LRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLD   SL  HQDIC LTAPV Q
Subjt:  KLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQ

Query:  GTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRI
        GTSLLPTDLSDCYDEDRSDRGLGAIA+DCVMAGGGSDG LDIC+ ICLVDEDEKLIF+TFVQP IPITNYR+  EVTGL EE +RYAMPLK+VQEKVL+I
Subjt:  GTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRI

Query:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        LLNGE+I RLRLNGGKARLLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

A0A6J1K8M7 RNA exonuclease 42.8e-11988.02Show/hide
Query:  KLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQ
        K  LRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLD   SLS HQDIC LTAPV Q
Subjt:  KLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQ

Query:  GTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRI
        GTSLLPTDLSDCYDEDRSDRGLGAIA+DCVMAGGGSDG LDIC+ ICLVDEDEKLIF+TFVQPQIPI NYR+  EVTGL EE +RYAMPLK+VQEKVL+I
Subjt:  GTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRI

Query:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        LLNGE+I RLR+NGGKARLLVGHDLEHDLDCLR+NYPDHMLR
Subjt:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

SwissProt top hitse value%identityAlignment
B2GUW6 Apoptosis-enhancing nuclease3.2e-0826.27Show/hide
Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD
        +AIDC M G G  G +       +V     +++  +++P++PI +YR     +G+  +HM  A+P +  Q+++L++L              K +++VGH 
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD

Query:  LEHDLDCLRINYPDHMLR
        L +D   L+  +P   +R
Subjt:  LEHDLDCLRINYPDHMLR

Q08237 RNA exonuclease 42.2e-0932.2Show/hide
Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD
        IA+DC   G G +G       I +V+    ++   FV+P+  +  +R    V+G+K EHM+ A+  K+ Q+K   IL              + R+LVGH 
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD

Query:  LEHDLDCLRINYPDHMLR
        L+HDL+ L +++P  +LR
Subjt:  LEHDLDCLRINYPDHMLR

Q4IEV5 RNA exonuclease 42.7e-1032.2Show/hide
Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD
        IAIDC M G G  G       + +VD     I+ ++V+P+  +TN+R    V+G+ ++ MR+A   ++VQ ++ ++L              + R+LVGHD
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD

Query:  LEHDLDCLRINYPDHMLR
        L+HDL+ L +++P   +R
Subjt:  LEHDLDCLRINYPDHMLR

Q6CMT3 RNA exonuclease 46.5e-0929.66Show/hide
Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD
        +++DC   G G DG       + +V+    ++   FV+P+ P+T++R    V+G+K  HM  A+  +  Q++V  +L              K R+LVGH 
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHD

Query:  LEHDLDCLRINYPDHMLR
        + HDL  L +++P  M+R
Subjt:  LEHDLDCLRINYPDHMLR

Q7S9B7 RNA exonuclease 42.2e-0930.15Show/hide
Query:  TDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGES
        TDL+      +S+     ++IDC M G G  GA  +     +VD     I+ ++V+P   +T++R    V+G+ + HM  A   + VQ  V  +L     
Subjt:  TDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGES

Query:  IGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
                 K R+LVGHD++HDL+ L   +P   +R
Subjt:  IGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein8.9e-7050.2Show/hide
Query:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE
        MDS  +    +K+S+RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+E
Subjt:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE

Query:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA
        H++ C L+ P   GTS      S       +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IFST VQP +P+T+YR+  E+TGL +E ++  
Subjt:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA

Query:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        MPL+ V+E+V   L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LR
Subjt:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

AT2G48100.2 Exonuclease family protein8.9e-7050.2Show/hide
Query:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE
        MDS  +    +K+S+RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+E
Subjt:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE

Query:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA
        H++ C L+ P   GTS      S       +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IFST VQP +P+T+YR+  E+TGL +E ++  
Subjt:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA

Query:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        MPL+ V+E+V   L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LR
Subjt:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

AT2G48100.3 Exonuclease family protein8.9e-7050.2Show/hide
Query:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE
        MDS  +    +K+S+RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+E
Subjt:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE

Query:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA
        H++ C L+ P   GTS      S       +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IFST VQP +P+T+YR+  E+TGL +E ++  
Subjt:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA

Query:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        MPL+ V+E+V   L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LR
Subjt:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

AT2G48100.4 Exonuclease family protein8.9e-7050.2Show/hide
Query:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE
        MDS  +    +K+S+RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+E
Subjt:  MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGP--LSKSNCSKIFSEQGCGLCLRVLDGPGSLSE

Query:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA
        H++ C L+ P   GTS      S       +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IFST VQP +P+T+YR+  E+TGL +E ++  
Subjt:  HQDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYA

Query:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        MPL+ V+E+V   L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LR
Subjt:  MPLKKVQEKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR

AT3G27970.1 Exonuclease family protein9.8e-6950.41Show/hide
Query:  SLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQG-
        +LR+KC+ACY+Q+ K EHL+EHM++SYHS H+P CGVC KHC+SFESLREHL GPL K  C  IFS +GC  C+ +L+ P S   HQ+ C  ++ V+ G 
Subjt:  SLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQG-

Query:  -TSLLPTDLSD----CYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEK
         T +    L D     Y   RS R    +A+ C M GGGSDG+LD+C  +C+ DE + +IF T+V+P + +T+YRY  E TG++ E++R AMPLK+VQ K
Subjt:  -TSLLPTDLSD----CYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEK

Query:  VLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR
        +   L NGE + ++R  GGKAR+LVGH L+HDLD L++ YP  M+R
Subjt:  VLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCGTCTCCGATCATGACCCTCCCAAGAAACTAAGCCTAAGACATAAATGCTCTGCATGCTACAAGCAATATAAGAAGAAGGAGCACCTTATTGAGCATATGAG
AGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGGGAACATCTAAAGGGTCCACTTTCAAAATCAAATT
GCTCAAAAATATTCTCGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCCGGATCTCTCAGTGAGCACCAAGACATTTGCTGCCTAACAGCACCTGTTCAC
CAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTACGATGAAGACCGTTCTGATCGAGGCCTTGGAGCAATAGCTATAGATTGTGTAATGGCTGGCGGTGGAAG
TGATGGTGCACTGGACATTTGTGTTTGGATCTGCCTTGTTGATGAAGATGAGAAATTGATTTTCAGTACTTTTGTACAACCACAAATACCAATCACGAATTACAGGTACT
TGCGTGAAGTAACCGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAAAGTCCAAGAAAAGGTATTAAGAATCTTGTTAAATGGAGAATCCATTGGGAGA
TTGAGATTGAATGGTGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATCAATTATCCCGATCATATGTTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
GAAATCCTTATGAATTGATCCCTCAAAAGTTTGGAACTAATTTGTTCAATTTGGACATAAATTCCTAGGAAGAATAAAAAGAAGTATATTTATGATGAGGTCAAATAAAA
GAAGAAAAAAAAACGAAGAAGGAAACTGGAAAAGAGAAGAACCTCAGAGTTCATCTTCCTCCCTTTCTCACTCACAGCCGCTGTCACACTCTTCTGTCGGAGTTTCATCT
CACTGGCGAGCCCCCGACGACGACGACGGCAAGTGTTCCTGTTCGCCAGCAACCTCAGGCCACGCGACTCACGCGTTGACGGCGTTACCCACACTGCAATCCCGTGCGTT
TGAGTTGCGTTTCCTCCTCTGGCGAGACCCACGAGTGGTGGTGAATCCGTCTTTGTAGCTGCACGACAGCAGGCTCTAGTGAAAGTTACGTGCGACGTTGGTTCAGCGAC
AGCTGCACTACGGGCTTCCCGGCGGCCGCATAAGCAAACAGATCCGACACCTATGATTGTCGGCGTTTCGATAGTGACCCACCAGAGCCTTCGCAGCAAAGTTTCTCTCC
TTTTCGACGAGTTTTGGCTTTGACCCACACTCCAATTATAGTTTTGGACTGGTTCGAAGAGATCGATTAAGGTTTATGGTTAATTTTGGCTTTATTGAAAAATACAAGCT
GTTGCACTAGATTCCAGAGGAGAGGAACATACACTAACAGTTTTGGCTCCGCATGGACTCCGTCTCCGATCATGACCCTCCCAAGAAACTAAGCCTAAGACATAAATGCT
CTGCATGCTACAAGCAATATAAGAAGAAGGAGCACCTTATTGAGCATATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAA
TCATTTGAATCATTGAGGGAACATCTAAAGGGTCCACTTTCAAAATCAAATTGCTCAAAAATATTCTCGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCC
CGGATCTCTCAGTGAGCACCAAGACATTTGCTGCCTAACAGCACCTGTTCACCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTACGATGAAGACCGTTCTG
ATCGAGGCCTTGGAGCAATAGCTATAGATTGTGTAATGGCTGGCGGTGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATCTGCCTTGTTGATGAAGATGAGAAATTG
ATTTTCAGTACTTTTGTACAACCACAAATACCAATCACGAATTACAGGTACTTGCGTGAAGTAACCGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAA
AGTCCAAGAAAAGGTATTAAGAATCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATT
TAGATTGCTTGAGAATCAATTATCCCGATCATATGTTAAGGTGATTTTCACTAACTTGGGTTCTAAGTATGTGTGGTCCTGTGGCTTAGTTCACCTTTATTGAAAACGAA
ATGCATTTGAACTCTGAAGTGATCTGGTGAAATGCAATGCACAAAAAACGATCAAATACTACTTTTCAACCCTGCACGTTATTTTCTCTGGAAATAATTCCTACCGCTGA
GGAAAACAATGGACACCGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGATATTCGTCAGGGT
GGGCACAACCCCTACGAGAATTGTGTATCAGTTATGCGATTATACAAGAGAATGCGTAGTCTTGATCACCGTGCACAAGTTTTGACACCATTGATTGCTCCTCCCGCTAT
CCAGTATGATGCTCCCAATCTTGATTCCCATAGTGTAAAAGATCTTGAGAAGATGACTCCAGATGAACTTTATGAGATGTCAAGATCAAACTTTAAATGTTGGTGTCTTG
ACTCAAGGCGAGTAATGCAGACTTAGGTGGTGTCGGCAATTTGTATAGACAGTACTCATTTTGCTGAGGAAGAGGTGAGGTTGTTGGAAGACACGCTTCAGTGGGCCTTA
TTTGTTGAGAAAGGGGGGAGTGAGAGGGGAAAGGTTGACCTGTTCTATTGTATCTATCTATCCTTTCAAGACTTAAAACGACTAAAGTCGTATTGGATGTTTTTCTTGCC
ATATGAATATTCATATGATGGTGTTTATTTCCTCGACTACCTTTTGTTTATTTACCTGGTCCCTTTTTTTTTTCCAAGCCATCATTAATACCCTTGAATCTTTCAAAACT
CTTCTGTCTTTGTCTTTTGCTTCTTCTTCGATTACGGTTTGGGAGATTTGGGTTAGTTGAGAATAATTTTTTAAAACAGAATCCTCCAATACTTTATTTCTTTTGATTTT
CGGGGATTTGAGTTGGTTTAGAAGGTTGGGC
Protein sequenceShow/hide protein sequence
MDSVSDHDPPKKLSLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCLKHCKSFESLREHLKGPLSKSNCSKIFSEQGCGLCLRVLDGPGSLSEHQDICCLTAPVH
QGTSLLPTDLSDCYDEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFSTFVQPQIPITNYRYLREVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIGR
LRLNGGKARLLVGHDLEHDLDCLRINYPDHMLR