; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G020340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:28062153..28062608
RNA-Seq ExpressionLsi01G020340
SyntenyLsi01G020340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607616.1 hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1335.76Show/hide
Query:  MEEVGKLEMLMVPDSYQSDEEYADLNSKAPSLFQWSIRRNNVDVDNYMINNDNENKVDVDVDVD------VDEGDEEAKEVDLEEKNEE------LYMVW
        MEE+G +E L+V DSY S EE             + I RNN    +  + +       +    D       ++  E+ +E++ EE  EE       Y  W
Subjt:  MEEVGKLEMLMVPDSYQSDEEYADLNSKAPSLFQWSIRRNNVDVDNYMINNDNENKVDVDVDVD------VDEGDEEAKEVDLEEKNEE------LYMVW

Query:  FDAFLAKHGFDKDYLD--QSSLQQIHKTWLQKKLTSAHFRFKEAEIDLKFINFRYAICKRWLSSL
        F  F++KHG D  +LD   S +Q++ K W+++++ +A  R KEAEID+  IN RYAICK+WLSSL
Subjt:  FDAFLAKHGFDKDYLD--QSSLQQIHKTWLQKKLTSAHFRFKEAEIDLKFINFRYAICKRWLSSL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGTGGGTAAGCTTGAAATGCTAATGGTTCCTGATTCATACCAATCTGATGAAGAATATGCAGATTTGAACTCCAAAGCTCCAAGTCTTTTCCAATGGTCGAT
AAGAAGGAATAATGTTGATGTTGATAATTATATGATTAATAATGATAATGAGAATAAGGTTGATGTTGATGTTGATGTTGATGTTGATGAAGGTGATGAAGAAGCAAAAG
AGGTTGATTTAGAAGAAAAGAATGAAGAGTTGTATATGGTGTGGTTTGATGCATTTTTGGCGAAACATGGGTTTGACAAAGATTATTTGGATCAATCTTCTCTACAACAA
ATCCACAAAACTTGGCTCCAAAAAAAGCTTACTTCTGCTCACTTCCGTTTCAAGGAGGCTGAAATTGATCTCAAATTCATCAATTTTAGATATGCTATTTGCAAACGATG
GCTTTCTTCCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGTGGGTAAGCTTGAAATGCTAATGGTTCCTGATTCATACCAATCTGATGAAGAATATGCAGATTTGAACTCCAAAGCTCCAAGTCTTTTCCAATGGTCGAT
AAGAAGGAATAATGTTGATGTTGATAATTATATGATTAATAATGATAATGAGAATAAGGTTGATGTTGATGTTGATGTTGATGTTGATGAAGGTGATGAAGAAGCAAAAG
AGGTTGATTTAGAAGAAAAGAATGAAGAGTTGTATATGGTGTGGTTTGATGCATTTTTGGCGAAACATGGGTTTGACAAAGATTATTTGGATCAATCTTCTCTACAACAA
ATCCACAAAACTTGGCTCCAAAAAAAGCTTACTTCTGCTCACTTCCGTTTCAAGGAGGCTGAAATTGATCTCAAATTCATCAATTTTAGATATGCTATTTGCAAACGATG
GCTTTCTTCCTTATGA
Protein sequenceShow/hide protein sequence
MEEVGKLEMLMVPDSYQSDEEYADLNSKAPSLFQWSIRRNNVDVDNYMINNDNENKVDVDVDVDVDEGDEEAKEVDLEEKNEELYMVWFDAFLAKHGFDKDYLDQSSLQQ
IHKTWLQKKLTSAHFRFKEAEIDLKFINFRYAICKRWLSSL