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Lsi01G020410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionextradiol ring-cleavage dioxygenase-like
Genome locationchr01:28178622..28178870
RNA-Seq ExpressionLsi01G020410
SyntenyLsi01G020410
Gene Ontology termsGO:0006725 - cellular aromatic compound metabolic process (biological process)
GO:0008198 - ferrous iron binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016701 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen (molecular function)
GO:0051213 - dioxygenase activity (molecular function)
InterPro domainsIPR004183 - Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603159.1 Extradiol ring-cleavage dioxygenase, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3385Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MALNDTFYVSHGSPTLTIDD IKARHFF+SWK+KVF Q PKAILC+SAH+DTAYP VNVVSG NDTIYDFYGFPS MY++
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

KAG7033478.1 Extradiol ring-cleavage dioxygenase, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-3385Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MALNDTFYVSHGSPTLTIDD IKARHFF+SWK+KVF Q PKAILC+SAH+DTAYP VNVVSG NDTIYDFYGFPS MY++
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

XP_022933118.1 extradiol ring-cleavage dioxygenase-like [Cucurbita moschata]1.3e-3283.75Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MA NDTFYVSHGSPTLTIDD IKARHFF+SWK+KVF Q PKAILC+SAH+DTAYP VNVVSG NDTIYDFYGFPS MY++
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

XP_022967922.1 extradiol ring-cleavage dioxygenase-like [Cucurbita maxima]4.5e-3385Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MALNDTFYVSHGSPTLTIDD IKARHFF+SWK+KVF Q PKAILC+SAH+DTAYP VNVVSG NDTIYDFYGFPS MY++
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

XP_038883407.1 extradiol ring-cleavage dioxygenase-like [Benincasa hispida]2.8e-3588.75Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MAL DTFYVSHGSPTLTIDDTIKAR FFQSWKEK+FPQRPKAILCISAHYDT+YP +NVVSG NDTIYDFYGFPS+MYK+
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

TrEMBL top hitse value%identityAlignment
A0A6J1D7R1 extradiol ring-cleavage dioxygenase1.4e-3280Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MA++DTFY+SHGSPTL+IDDTI+AR FFQSWK+KVFPQ+PK+ILCISAHYDT++P +NVVSG NDTIYDFYGFPS MYK+
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

A0A6J1EYV3 extradiol ring-cleavage dioxygenase-like1.1e-2977.5Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MALNDTFY+SHGSP L+IDD+IKAR FF+SWK +V   +PKAILCISAHYDT +P VNVVSG NDTIYDFYGFPS MYK+
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

A0A6J1F3T4 extradiol ring-cleavage dioxygenase-like6.4e-3383.75Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MA NDTFYVSHGSPTLTIDD IKARHFF+SWK+KVF Q PKAILC+SAH+DTAYP VNVVSG NDTIYDFYGFPS MY++
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

A0A6J1HS49 extradiol ring-cleavage dioxygenase-like2.2e-3385Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MALNDTFYVSHGSPTLTIDD IKARHFF+SWK+KVF Q PKAILC+SAH+DTAYP VNVVSG NDTIYDFYGFPS MY++
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

A0A6J1HWD7 extradiol ring-cleavage dioxygenase-like2.3e-3078.75Show/hide
Query:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        MALNDTFY+SHGSPTL+IDD+IKAR FF+SWK +V   +PKAILCISAHYDT +P VNVVSG NDTIYDFYGFPS MYK+
Subjt:  MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

SwissProt top hitse value%identityAlignment
B6F0W8 4,5-DOPA dioxygenase extradiol2.4e-1342.31Show/hide
Query:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        +  T+Y++HG P + +   IK R F + W+E V  ++PK+IL ISAH+DT  P VN V    DTI+DF  +P  +Y++
Subjt:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

I3PFJ3 4,5-DOPA dioxygenase extradiol 11.2e-1748.68Show/hide
Query:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMY
        + ++F+++HG+P LT++DT   R FF++W+EK+F ++PKAIL IS H++T  P VN V  +NDTI+DF  +P+ MY
Subjt:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMY

I3PFJ9 4,5-DOPA dioxygenase extradiol 17.3e-1848.05Show/hide
Query:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYK
        + ++F+++HG+P LT++DT   R FF++W+EK+F ++PKAIL IS H++T  P VN V  +NDTI+DF  +P+ MY+
Subjt:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYK

Q70FG7 4,5-DOPA dioxygenase extradiol3.5e-2053.25Show/hide
Query:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYK
        + +TF++SHG+P + IDD+  ++ F +SW+EK+F ++PKAIL ISAH++T  P VNVV  +NDTIYDF GFP+ +Y+
Subjt:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYK

Q949R4 Extradiol ring-cleavage dioxygenase4.4e-2361.54Show/hide
Query:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        +N TF++SHGSPTL+IDD+++AR FF+SW +KV PQ+PK+IL ISAH+DT +P VN V   N+TI+DF GFP  MYK+
Subjt:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV

Arabidopsis top hitse value%identityAlignment
AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family3.1e-2461.54Show/hide
Query:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV
        +N TF++SHGSPTL+IDD+++AR FF+SW +KV PQ+PK+IL ISAH+DT +P VN V   N+TI+DF GFP  MYK+
Subjt:  LNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGAATGACACTTTCTACGTATCCCATGGATCTCCCACCCTAACCATCGACGACACCATCAAAGCAAGACATTTCTTCCAATCTTGGAAGGAGAAGGTTTTCCC
CCAAAGACCTAAAGCCATCCTCTGCATTTCTGCCCATTACGACACCGCCTACCCTATGGTCAATGTCGTTTCAGGCCTCAACGACACCATCTACGACTTCTATGGCTTCC
CTTCGGAAATGTACAAGGTAACCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGAATGACACTTTCTACGTATCCCATGGATCTCCCACCCTAACCATCGACGACACCATCAAAGCAAGACATTTCTTCCAATCTTGGAAGGAGAAGGTTTTCCC
CCAAAGACCTAAAGCCATCCTCTGCATTTCTGCCCATTACGACACCGCCTACCCTATGGTCAATGTCGTTTCAGGCCTCAACGACACCATCTACGACTTCTATGGCTTCC
CTTCGGAAATGTACAAGGTAACCATGTAG
Protein sequenceShow/hide protein sequence
MALNDTFYVSHGSPTLTIDDTIKARHFFQSWKEKVFPQRPKAILCISAHYDTAYPMVNVVSGLNDTIYDFYGFPSEMYKVTM