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Lsi01G020620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAspartate carbamoyltransferase
Genome locationchr01:28819339..28821549
RNA-Seq ExpressionLsi01G020620
SyntenyLsi01G020620
Gene Ontology termsGO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process (biological process)
GO:0006520 - cellular amino acid metabolic process (biological process)
GO:0006784 - heme a biosynthetic process (biological process)
GO:0044205 - 'de novo' UMP biosynthetic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004070 - aspartate carbamoyltransferase activity (molecular function)
GO:0016597 - amino acid binding (molecular function)
GO:0016653 - oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor (molecular function)
InterPro domainsIPR036901 - Aspartate/ornithine carbamoyltransferase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV85885.1 OTCace domain-containing protein/OTCace_N domain-containing protein [Cephalotus follicularis]5.4e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTI+REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIYLV PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

KAG6577459.1 Aspartate carbamoyltransferase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

KAG7015530.1 Aspartate carbamoyltransferase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

XP_022158873.1 aspartate carbamoyltransferase 3, chloroplastic isoform X3 [Momordica charantia]3.2e-1982.35Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFKAKIYHY
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK  F  +I  Y
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFKAKIYHY

XP_023553188.1 aspartate carbamoyltransferase, chloroplastic [Cucurbita pepo subsp. pepo]7.1e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

TrEMBL top hitse value%identityAlignment
A0A1Q3D0D6 Aspartate carbamoyltransferase2.6e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTI+REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIYLV PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

A0A6J1DXA3 aspartate carbamoyltransferase 3, chloroplastic isoform X31.5e-1982.35Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFKAKIYHY
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK  F  +I  Y
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFKAKIYHY

A0A6J1E281 Aspartate carbamoyltransferase3.4e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

A0A6J1EW79 Aspartate carbamoyltransferase3.4e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

A0A6J1HJC0 Aspartate carbamoyltransferase3.4e-1987.1Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQREIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

SwissProt top hitse value%identityAlignment
P49077 Aspartate carbamoyltransferase, chloroplastic2.8e-1875.81Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQ EIGKLDGI V LVGDLA GRTVRSLAYLL K++DVKIY V P+++KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

Q43064 Aspartate carbamoyltransferase 3, chloroplastic1.8e-2082.26Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTI+REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V P+V+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

Q43086 Aspartate carbamoyltransferase 1, chloroplastic3.9e-2080.65Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTI+REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVK+Y V P+V+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

Q43087 Aspartate carbamoyltransferase 2, chloroplastic5.1e-2080.65Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTI+REIGKLDGIKVGLVGDLA GRTVRSL YLL KY+DVKIY V P+V+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

Q9LD61 Aspartate carbamoyltransferase, chloroplastic5.6e-1975.81Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVY+I+REIG LDGIK+GLVGDLA GRTVRSLAYL+ KYQ++KIY V PDV+KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK

Arabidopsis top hitse value%identityAlignment
AT3G20330.1 PYRIMIDINE B2.0e-1975.81Show/hide
Query:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK
        ALLDVYTIQ EIGKLDGI V LVGDLA GRTVRSLAYLL K++DVKIY V P+++KMK   K
Subjt:  ALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAGACTCCAGAGCTTCTTTTGCTAAGCTTTGCGAGAACTTGAAAATAATCCTGTTGGCTCTTCTAGATGTATATACTATTCAGAGAGAGATAGGAAAACTTGA
TGGAATTAAAGTTGGGCTCGTGGGAGATCTTGCTACTGGGAGAACTGTACGGTCACTTGCATATTTGCTCGTTAAGTATCAAGATGTGAAAATATACCTTGTCTACCCAG
ATGTTCTAAAAATGAAGGTAAGTTTTAAAGCAAAAATCTACCATTATTGCCTATTGTGA
mRNA sequenceShow/hide mRNA sequence
CTGGAACAACATCCAACTCAGGTTTGTCAGCACCTTTTTTAGTCTTGTAATATAATGGTTGTATGAATATGTAACATATAAGAGTAAATAGGAAGGAAGTGTTATAAACA
TGATTATTGGTAAAAAAAGTACAACATGAGTGGTAGAAATTTGAAAACAGAATGTTCATTTGAGAGGATTTTGATGCCCAAAATTTTCACTGAATTTTCAATCGTCCTCA
CAAGAAAATTCAGTTTTGACGAATTACTAATTCCATACCCCTCTTCTGCATTCATTAAGCAATATAAATAGCAAGTTTCCATAGTATTTCTTGCAAAATGATTAACGAAT
CAACTAAAAATGAGCAACCATTCACCACATGCCGTAACTCTCATTGTTACATGCACATTACAAAGACTTTTTAAAGAAACGAATCGATTGAGAGTATTTGTAGTAAATAG
CCCCTAAATACATATGACTTTATTTCCTAGCATCTGTATTTGGTTGCTTTGCTGAATTTCGTACAAAAGTTCAAACAAGTAATTTGAATGTTGGTCTTTCAATGCGTTTG
ATTCCATTGAATACCATGAATATAATAAAAGAATGAGATATTTTACTTGTTTGAGGGTCATTAAAAAGATATCAGAAAAAGAAGTATGGATCCAGACTCCAGAGCTTCTT
TTGCTAAGCTTTGCGAGAACTTGAAAATAATCCTGTTGGCTCTTCTAGATGTATATACTATTCAGAGAGAGATAGGAAAACTTGATGGAATTAAAGTTGGGCTCGTGGGA
GATCTTGCTACTGGGAGAACTGTACGGTCACTTGCATATTTGCTCGTTAAGTATCAAGATGTGAAAATATACCTTGTCTACCCAGATGTTCTAAAAATGAAGGTAAGTTT
TAAAGCAAAAATCTACCATTATTGCCTATTGTGAATGACATTCTTTGTTGGCCATGATATTGGGAAACTATGTTTGGAGACTGGATAAACTGACTATGCTATTACTTGTG
TCTATTTTAAAGTAAATCGGACAAGTAAAAACTATATGAGTGTGTTTGGTTCAAGGAGTTGGGAAGTAAAAGTAGGGAAGTAGAAGTTTGTGAACTCCACTCCTTATTTG
GCCCATAAAAAATGTCAATTTTATATCTTGTCAACTCCTTACACTGTGGCCCCAAGAGTTCACAACTCCATAGACTTTATAATTTCTTACTTCTCACTATTTCACTCCTT
ATCCCAAACACTCCCTATAAAGTTACTAGTTGCTTTAAAATCTTCCAACGGTTAAACTTGTTTGTTTATCTAGGATGATATAAAATACTATTTGACATCACTAGATGTGA
AATGGGAAGAATGTGACAACTTGATGGAAGTTGCATCAGAGTGTGATTTGGTATATCAAACTCGTATTCAGCCGGAAAAATTTGTAGAGAGGATTGATCTTTATGAACAA
GCTAAAAAAAGAAAAAAAAGTGTTAAAAGTGAAGCAGAGACAATCTGTGGTCATGCACCCCCTCCCTAGGCTTGATGAATCATAAGCATCAAATCCTTCGACCACTTAAG
TCAGTTTTTGAAACAATCCACATATCTTCATTGGCACACTGTTAAACGAGTGCTTCCTTACCTAGTTGGAACCAAGATAGTGTGCCTTCATGTTCAACCAGGGTGTGACT
AATTTTCTGTTATTGCCTTTTTAGATGCCGACTAGGCGGTCGACACTTTGTTGCAGCCTACCATGTGTTTCTTGGGAATACTCTTGTGTGTTGGAGGTCCTCCAAGTAAC
AAACTGCAATGTCCAGATCAAGCACATAATCAGAATATCGAGCTATAACACATGCAACTGCTGAAATTATTTGGCTTCATTAATTACTTGACGAACTTGGTGTTTTCGTA
TATATGGTTTACTTGTTTGTCATTCACTTATTAGCGAGATATTGTTGGTTACAATGGTCACTGCCACACTTACAATCATTATGGTGGGGATCAAACATTCAACTTCAAGA
GAGGTAGTACATGTCAATTAGCGCTGAGTAAGCTCACTTGGGTTGTTGCTATACACATCTATGACTATTAGATTTTTATTTTATGTATTTAACTGTTATAAGGTGGATAT
GACAATTTCTCTATTATAATTTAAAGTTTTGTTTGATTATTGGTT
Protein sequenceShow/hide protein sequence
MDPDSRASFAKLCENLKIILLALLDVYTIQREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKVSFKAKIYHYCLL