; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G020780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G020780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc finger CCCH domain-containing protein 36-like
Genome locationchr01:29297259..29302979
RNA-Seq ExpressionLsi01G020780
SyntenyLsi01G020780
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146386.1 zinc finger CCCH domain-containing protein 31 [Cucumis sativus]6.3e-16596.07Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGG SAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG---HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN
        VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG   HM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGIN
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG---HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
        SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL

Query:  RKSGV
        RKSGV
Subjt:  RKSGV

XP_008442098.1 PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]3.7e-16596.38Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINS
        VKTRMCNK+NTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG  HM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINS
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINS

Query:  KQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
        KQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
Subjt:  KQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR

Query:  KSGV
        KSGV
Subjt:  KSGV

XP_022967865.1 zinc finger CCCH domain-containing protein 31 [Cucurbita maxima]3.8e-15492.08Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP V+NGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
        +KTRMCNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR    G GGGHM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ

Query:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
        ICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIITVSM+GPGKA G M GGGP P+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
Subjt:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK

Query:  SGV
        SGV
Subjt:  SGV

XP_023545090.1 zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo]7.7e-15592.41Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP VTNGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
        +KTRMCNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR     G GGHM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ

Query:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
        ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSM+GPGKA G M GGGP P+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
Subjt:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK

Query:  SGV
        SGV
Subjt:  SGV

XP_038882544.1 zinc finger CCCH domain-containing protein 31 [Benincasa hispida]5.9e-16395.7Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRP+A+FN+NGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNM APP VTNGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
        VK+RMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGGHM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ

Query:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS
        ICRQTGAKLSIRDHE DPNLRNIELEGTFEQINEASAMVRELIITVSM GPGKA GGMGGGP PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS
Subjt:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS

Query:  GV
        GV
Subjt:  GV

TrEMBL top hitse value%identityAlignment
A0A0A0KZ79 Uncharacterized protein3.0e-16596.07Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGG SAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG---HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN
        VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG   HM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGIN
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG---HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
        SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL

Query:  RKSGV
        RKSGV
Subjt:  RKSGV

A0A1S3B4W9 zinc finger CCCH domain-containing protein 36-like1.8e-16596.38Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINS
        VKTRMCNK+NTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG  HM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINS
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINS

Query:  KQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
        KQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
Subjt:  KQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR

Query:  KSGV
        KSGV
Subjt:  KSGV

A0A6J1EBA5 zinc finger CCCH domain-containing protein 31-like6.0e-15392.05Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKR RPE++FNSNG FKKHKQELE LSTVGSKSKPCTKFFSTAGCPFGESCHFLH+VPGGYNVVAQMMNL PVGSQPSRNMAAPPSVTNGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
        VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGR  PPSHDNPRA+     GGHM GRMGGRMD+P PGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ

Query:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS
        ICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASAMVRELIITVSMAGPGKA G MGGGP P+GSNYKTK+CDNFAKGSCTFGERCHFAHGAAELRKS
Subjt:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS

Query:  GV
        GV
Subjt:  GV

A0A6J1ESD4 zinc finger CCCH domain-containing protein 14-like3.2e-15491.75Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP V+NGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
        +KTRMCNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR     G GGHM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ

Query:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
        ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSM+GPGK  G M GGGP P+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
Subjt:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK

Query:  SGV
        SGV
Subjt:  SGV

A0A6J1HVM0 zinc finger CCCH domain-containing protein 311.9e-15492.08Show/hide
Query:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ
        MDMRKRGRPEA+FNSNG+FKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP V+NGGSSAPSQ
Subjt:  MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
        +KTRMCNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR    G GGGHM GRMGGRMD+PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ

Query:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
        ICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIITVSM+GPGKA G M GGGP P+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK
Subjt:  ICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK

Query:  SGV
        SGV
Subjt:  SGV

SwissProt top hitse value%identityAlignment
Q69XQ3 Zinc finger CCCH domain-containing protein 446.5e-8056.95Show/hide
Query:  KRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAP-----S
        KR  PE    +NGA K+ +    S   VGSK KPCTKFFST+GCPFG SCHFLH  PGGY   A+M       S     +AAPP     G  AP     S
Subjt:  KRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAP-----S

Query:  QVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPG--PAASFGASATAKISIDASLAGAIIGKGGIN
         VKTRMCNKYNTAEGCK+G KC+FAHGE ELG+P    +  P           MG        MP P   P ++FGASATAKIS+DASLAG IIGKGG N
Subjt:  QVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPG--PAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
        +K I R TGAKL+IRD+ES+PNL+NIELEGTF+QI  ASAMV ELI+ +S   P   + G G      GSN+KTKLC+NF KGSCTFG+RCHFAHG +EL
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL

Query:  RK
        RK
Subjt:  RK

Q7F8R0 Zinc finger CCCH domain-containing protein 147.1e-8760.84Show/hide
Query:  RKRGRPEASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNL-APVGSQPSRNMAAPPSVTNGGSSAPSQV
        RKRG+P+    +NGA  K  +E ES  T VGSKSKPCTKFFST+GCPFGE CHFLH+ PGGY  VA+M NL  P  + P   M    +V +G  +    V
Subjt:  RKRGRPEASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNL-APVGSQPSRNMAAPPSVTNGGSSAPSQV

Query:  KTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP-PGPA----ASFGASATAKISIDASLAGAIIGKGGI
        KTR+CNKYNTAEGCK+GDKC+FAHGE ELG+P       P           MG R  G    PP P PA    ASFGASATAKIS+DASLAG IIG+GG+
Subjt:  KTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP-PGPA----ASFGASATAKISIDASLAGAIIGKGGI

Query:  NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGP---GKASGG--MGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFA
        N+KQI R TGAKL+IRDHESD NL+NIELEGTF+QI  ASAMVRELI+++    P    K  GG   GGGP   GSN+KTKLC+NF KGSCTFG+RCHFA
Subjt:  NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGP---GKASGG--MGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFA

Query:  HGAAELRKS
        HG  ELRKS
Subjt:  HGAAELRKS

Q7XPK1 Zinc finger CCCH domain-containing protein 314.0e-9060.32Show/hide
Query:  RKRGRPEASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLA-PVGSQPSRNMAAPPSVTNGGSSAP-SQ
        RKR RP+ + N   A  K  +E ES  T + SK KPCTKFFST GCPFGE CHF H+VPGGY  VA+ +NL  P    P+R   AP     GG+S P S 
Subjt:  RKRGRPEASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLA-PVGSQPSRNMAAPPSVTNGGSSAP-SQ

Query:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPG----PAASFGASATAKISIDASLAGAIIGKGGI
         KTRMC KYNTAEGCKFGDKC+FAHGE ELG+P   SH++  A         MGGR GGR + PPP     PA +FGASATAKIS+DASLAG IIGKGG+
Subjt:  VKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPG----PAASFGASATAKISIDASLAGAIIGKGGI

Query:  NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTG-------SNYKTKLCDNFAKGSCTFGERCH
        N+KQICR TG KLSIRDHESD NL+NIELEG F+QI +AS MV ELI T+S + P K   G   G  P G       SNYKTKLC+NF KG+CTFG+RCH
Subjt:  NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTG-------SNYKTKLCDNFAKGSCTFGERCH

Query:  FAHGAAELRK
        FAHG  E RK
Subjt:  FAHGAAELRK

Q9C7C3 Zinc finger CCCH domain-containing protein 361.8e-7453.35Show/hide
Query:  MDMRKRGRPEA-SFNSN-GAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA
        MD RKRGRPEA SFNSN G +KK KQE+ES ST +GSKSKPCTKFFST+GCPFGE+CHFLHYVPGGYN V+QM N+ P   Q SRNM             
Subjt:  MDMRKRGRPEA-SFNSN-GAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA

Query:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN
                                                        G G GG   GR         PG  ++FG SATA+ S+DASLAGAIIGKGG++
Subjt:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PVPTGSNYKTKLCDNFAKGSCTFGERCH
        SKQICRQTG KLSI+DHE DPNL+NI LEGT EQI+EASAMV++LI  ++ A      GG+GGG        P P GSN+KTK+C+ F+KG+CTFG+RCH
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PVPTGSNYKTKLCDNFAKGSCTFGERCH

Query:  FAHGAAELRKSGV
        FAHG AELRKSG+
Subjt:  FAHGAAELRKSGV

Q9FG30 Zinc finger CCCH domain-containing protein 521.9e-7655.41Show/hide
Query:  MDMRKRGRPE--ASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA
        MD RKRGRPE  AS NSNG FK+ KQE+ES+ST +GSKSKPCTKFFST+GCPFG++CHFLHYVPGGYN  AQM NL P  SQ SRNM             
Subjt:  MDMRKRGRPE--ASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA

Query:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN
                                                           G G  GGR  GR D P  GP + FGAS T+KIS+DASLAGAIIGKGGI+
Subjt:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
        SKQICR+TGAKLSI+DHE DPNL+ IELEGTFEQIN AS MVRELI  +      +  GG  G P P GSNYKTK+CD ++KG+CT+G+RCHFAHG +EL
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL

Query:  RKSGV
        R+SG+
Subjt:  RKSGV

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein1.1e-1036.67Show/hide
Query:  KSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG-SQPSRNMAAPPSVTNGGSSA---------------------PSQVKTRMCNKYNTA
        K + C KF++  GCP+GESC FLH      N  +  ++L P G        +   SV  GGSS+                     PS  KTR+CNK+   
Subjt:  KSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG-SQPSRNMAAPPSVTNGGSSA---------------------PSQVKTRMCNKYNTA

Query:  EGCKFGDKCNFAHGEWELGR
          C FG KC+FAHG  EL R
Subjt:  EGCKFGDKCNFAHGEWELGR

AT2G25970.1 KH domain-containing protein1.3e-0637.27Show/hide
Query:  GGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI-RDHESDPN--LRNIELEGTFEQINEASAMVRELIITVSMAG
        G +M G +    P    SF    T KI I     G IIGKGG   K +  Q+GAK+ + RD ++DPN   R ++L GT +QI++A  ++ + ++  + AG
Subjt:  GGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI-RDHESDPN--LRNIELEGTFEQINEASAMVRELIITVSMAG

Query:  PGKASGGMGG
            SGG GG
Subjt:  PGKASGGMGG

AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein1.3e-7553.35Show/hide
Query:  MDMRKRGRPEA-SFNSN-GAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA
        MD RKRGRPEA SFNSN G +KK KQE+ES ST +GSKSKPCTKFFST+GCPFGE+CHFLHYVPGGYN V+QM N+ P   Q SRNM             
Subjt:  MDMRKRGRPEA-SFNSN-GAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA

Query:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN
                                                        G G GG   GR         PG  ++FG SATA+ S+DASLAGAIIGKGG++
Subjt:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PVPTGSNYKTKLCDNFAKGSCTFGERCH
        SKQICRQTG KLSI+DHE DPNL+NI LEGT EQI+EASAMV++LI  ++ A      GG+GGG        P P GSN+KTK+C+ F+KG+CTFG+RCH
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PVPTGSNYKTKLCDNFAKGSCTFGERCH

Query:  FAHGAAELRKSGV
        FAHG AELRKSG+
Subjt:  FAHGAAELRKSGV

AT3G19360.1 Zinc finger (CCCH-type) family protein8.3e-0630.67Show/hide
Query:  PSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGR---MDMPPPGPAASFGASA
        PS N   PP V  G  +A    KTRMC K+  A  C+ G+ CNFAHG  +L +  PPS  N + I G    G    R   R    + P   P  +     
Subjt:  PSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGR---MDMPPPGPAASFGASA

Query:  TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDN
          KI +   L               C      LS +  E    LR   +        +  +     +I V+  G       M  G V     +KT+LC  
Subjt:  TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDN

Query:  F-AKGSCTFGERCHFAHGAAELRKS
        F   G C FG++CHFAHG AEL  S
Subjt:  F-AKGSCTFGERCHFAHGAAELRKS

AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein1.4e-7755.41Show/hide
Query:  MDMRKRGRPE--ASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA
        MD RKRGRPE  AS NSNG FK+ KQE+ES+ST +GSKSKPCTKFFST+GCPFG++CHFLHYVPGGYN  AQM NL P  SQ SRNM             
Subjt:  MDMRKRGRPE--ASFNSNGAFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSA

Query:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN
                                                           G G  GGR  GR D P  GP + FGAS T+KIS+DASLAGAIIGKGGI+
Subjt:  PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGIN

Query:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
        SKQICR+TGAKLSI+DHE DPNL+ IELEGTFEQIN AS MVRELI  +      +  GG  G P P GSNYKTK+CD ++KG+CT+G+RCHFAHG +EL
Subjt:  SKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL

Query:  RKSGV
        R+SG+
Subjt:  RKSGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTTCCTTCAATTCTAATGGTGCCTTTAAGAAGCATAAGCAAGAACTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAA
GCCATGCACCAAGTTTTTCAGTACGGCTGGTTGTCCATTTGGTGAAAGCTGCCACTTCTTGCATTACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCG
CTCCTGTCGGTTCTCAACCATCTAGAAACATGGCTGCCCCACCTTCTGTCACCAACGGCGGGTCCTCTGCTCCGTCCCAAGTCAAAACTCGCATGTGCAACAAATACAAC
ACCGCAGAAGGCTGCAAGTTTGGTGATAAATGCAACTTTGCCCATGGAGAGTGGGAACTTGGGAGGCCTAACCCTCCATCTCACGATAATCCCCGTGCCATAGGAGGAGG
TGGAGGAGGAGGACATATGGGTGGTCGTATGGGTGGGCGAATGGACATGCCACCACCGGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACCGCAAAGATCAGTATAGATG
CCTCACTTGCAGGAGCGATAATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTTTCCATCAGGGACCATGAATCGGATCCGAATCTG
AGAAACATAGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATCATCACAGTTTCGATGGCAGGACCCGGTAAAGCATCTGGCGG
GATGGGAGGAGGTCCTGTGCCTACCGGTAGCAACTATAAAACAAAGCTGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGG
CTGCTGAATTACGCAAGTCCGGAGTATGA
mRNA sequenceShow/hide mRNA sequence
CCGTTCTCCGCCAATTCCCAATCTCTCTAATTTTCTCCATAGCTTCTAAAAATCCTCAATATCCCTTCCCCACCATAACCCTCCGACTCTAGGGTTTGGTTTTCACTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTTCCCTTTCACCTGTTTCCTTTCCAATTCTTTTTCCCTTCTCTC
CTCCCTCTAATATCTACAACTGTAGCTTGCTTTTTCTTTTTCGATTTACTTTCTCGATCTCGATCTCTGCTTATCTTCAATGGATATGCGCAAGCGAGGGAGGCCTGAAG
CTTCCTTCAATTCTAATGGTGCCTTTAAGAAGCATAAGCAAGAACTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACGGCTGGT
TGTCCATTTGGTGAAAGCTGCCACTTCTTGCATTACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCGCTCCTGTCGGTTCTCAACCATCTAGAAACAT
GGCTGCCCCACCTTCTGTCACCAACGGCGGGTCCTCTGCTCCGTCCCAAGTCAAAACTCGCATGTGCAACAAATACAACACCGCAGAAGGCTGCAAGTTTGGTGATAAAT
GCAACTTTGCCCATGGAGAGTGGGAACTTGGGAGGCCTAACCCTCCATCTCACGATAATCCCCGTGCCATAGGAGGAGGTGGAGGAGGAGGACATATGGGTGGTCGTATG
GGTGGGCGAATGGACATGCCACCACCGGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCAGGAGCGATAATTGGCAAGGG
TGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTTTCCATCAGGGACCATGAATCGGATCCGAATCTGAGAAACATAGAACTGGAGGGCACTTTTGAGC
AAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATCATCACAGTTTCGATGGCAGGACCCGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGTGCCTACCGGTAGC
AACTATAAAACAAAGCTGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAATTACGCAAGTCCGGAGTATGATC
AAGTTCCCGATTTTGTTTAGTTTTTATTAAAAGGGAGTTTTGCTTTAAAGCGTGCAGTCGACACACGAGTGCGATATTGAAGTTGGGGAGGATTTGGTTCCGGTTCTTCC
TATGTTGTAGCTTTATGAGAGTATCTCTTTGGCGTTCCTTGATTAGAAGATAATTAAGTTATTAATTTTTATGATTGCTAATCATTTTTATTTCCCATTACATTAAATCA
GATCATGTTTCCATAATTTACATAATCTGGTTAATGTTTGCCCAATGTCACTAATTGATGGCCATCTTTGCTTGCTTGTCCAAAACTAAAAGACTGTAGTTAATAACTTT
ACTAGCTTAAATATTTGTACGTGTATTTATAAATTTGGCTTGGTTATTCTTTCTTTATTCACAC
Protein sequenceShow/hide protein sequence
MDMRKRGRPEASFNSNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYN
TAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNL
RNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV