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Lsi02G000160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G000160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Genome locationchr02:235999..236899
RNA-Seq ExpressionLsi02G000160
SyntenyLsi02G000160
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607394.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3949.78Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRF--SALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGP-YNFTTGFLYIL
        MD  VVA IG+GLRIF FICL IALVVIATDKL LIDG ++TFND+ GYR+  S   I L+  +   +L   I++ V      ++  P +N+ T      
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRF--SALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGP-YNFTTGFLYIL

Query:  CAYPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPL
                      I  +   AAGAG AVSA+ K  ++  +E  +GD G     +D+QK L+DDFFD+ANIA+AILFLAFLS+AT+LLLSPFNR+KP P 
Subjt:  CAYPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPL

Query:  PTQDLEAQNLEAQKHEAQSSQAQSTEAQTPE
         TQDLEA + +AQK +AQS QA + EAQ+P+
Subjt:  PTQDLEAQNLEAQKHEAQSSQAQSTEAQTPE

XP_008454028.1 PREDICTED: CASP-like protein 4D1 [Cucumis melo]8.0e-5761.64Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY
        MDPKV+ LIG+G+RIF+FICLLIALVVIATDKL+LI+GFKATFNDVHGYR+      +   +   +L   I+H +             F  G   +   Y
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY

Query:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGD-YGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT
            ++ W      +   A GAGFAVS ELK +V+SRI KE GD YGFFS +VDEQKSLIDDFFDKANIATAILFLAF+SMATLLLLSPFNRIKPTPLPT
Subjt:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGD-YGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT

Query:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS
        QD EAQ L     EAQSSQAQ TEAQ+ EPPS
Subjt:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS

XP_011649480.1 CASP-like protein 4D2 [Cucumis sativus]3.7e-5458.8Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY
        MDPKV+ALIG+GLRIF+FICLLIALVVIATDKL+LI+GFKATFND+HGYR+      +   +   +L   I+H +             F  G   +   Y
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY

Query:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELG--DYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLP
            ++ W      +     GAGFAVS ELK +VDSR +KE G  DYGFFSP ++EQKSLIDDFF+KA +ATAILFLAF+SMATLLLLSPFNRIKPTPLP
Subjt:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELG--DYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLP

Query:  TQDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS
         QD      EAQK EAQSSQ Q TEAQ+ EPPS
Subjt:  TQDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS

XP_022137163.1 CASP-like protein 4D1 [Momordica charantia]5.4e-4557.34Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLI-CNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCA
        MDPKVVA I +GLR F FICLLIALVVIATDKLALIDG+KATFND+HGYR+  L I +I   +   +L   ++H +        +  +N    F Y    
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLI-CNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCA

Query:  YPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT
             +L W      +   AAGAGFAV+AELKR VD  I+  +GDY  F P VD+Q+SLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKP    T
Subjt:  YPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT

Query:  QDLEAQNLEAQKHEAQSS
        QD EAQ  E     A SS
Subjt:  QDLEAQNLEAQKHEAQSS

XP_038894422.1 CASP-like protein 4D1 [Benincasa hispida]2.5e-5864.68Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY
        MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALI GFKATFNDVHGYR+      +   +   +L+  I+H +        +  +N    F Y     
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY

Query:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSR--IEKELG-DYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPL
            ++ W      +   AAGAGFAVSAELK FVDS   +EKE G DYGFFSP+VDEQKSLIDDFFDKANIATAILFLAFLSMATL+LLSPFNRIKPTPL
Subjt:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSR--IEKELG-DYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPL

Query:  PTQDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPSG
        PTQDLEAQ L     EAQS QAQST     EPPSG
Subjt:  PTQDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPSG

TrEMBL top hitse value%identityAlignment
A0A0A0LSG6 CASP-like protein1.8e-5458.8Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY
        MDPKV+ALIG+GLRIF+FICLLIALVVIATDKL+LI+GFKATFND+HGYR+      +   +   +L   I+H +             F  G   +   Y
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY

Query:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELG--DYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLP
            ++ W      +     GAGFAVS ELK +VDSR +KE G  DYGFFSP ++EQKSLIDDFF+KA +ATAILFLAF+SMATLLLLSPFNRIKPTPLP
Subjt:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELG--DYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLP

Query:  TQDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS
         QD      EAQK EAQSSQ Q TEAQ+ EPPS
Subjt:  TQDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS

A0A1S3BYF7 CASP-like protein3.9e-5761.64Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY
        MDPKV+ LIG+G+RIF+FICLLIALVVIATDKL+LI+GFKATFNDVHGYR+      +   +   +L   I+H +             F  G   +   Y
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY

Query:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGD-YGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT
            ++ W      +   A GAGFAVS ELK +V+SRI KE GD YGFFS +VDEQKSLIDDFFDKANIATAILFLAF+SMATLLLLSPFNRIKPTPLPT
Subjt:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGD-YGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT

Query:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS
        QD EAQ L     EAQSSQAQ TEAQ+ EPPS
Subjt:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS

A0A5D3BGC2 CASP-like protein3.9e-5761.64Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY
        MDPKV+ LIG+G+RIF+FICLLIALVVIATDKL+LI+GFKATFNDVHGYR+      +   +   +L   I+H +             F  G   +   Y
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCAY

Query:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGD-YGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT
            ++ W      +   A GAGFAVS ELK +V+SRI KE GD YGFFS +VDEQKSLIDDFFDKANIATAILFLAF+SMATLLLLSPFNRIKPTPLPT
Subjt:  PKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGD-YGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT

Query:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS
        QD EAQ L     EAQSSQAQ TEAQ+ EPPS
Subjt:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPEPPS

A0A6J1C9J6 CASP-like protein2.6e-4557.34Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLI-CNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCA
        MDPKVVA I +GLR F FICLLIALVVIATDKLALIDG+KATFND+HGYR+  L I +I   +   +L   ++H +        +  +N    F Y    
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLI-CNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTGFLYILCA

Query:  YPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT
             +L W      +   AAGAGFAV+AELKR VD  I+  +GDY  F P VD+Q+SLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKP    T
Subjt:  YPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT

Query:  QDLEAQNLEAQKHEAQSS
        QD EAQ  E     A SS
Subjt:  QDLEAQNLEAQKHEAQSS

A0A6J1K769 CASP-like protein1.3e-3949.78Show/hide
Query:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGP-YNFTTGFLYILCA
        MD  VVA IG+GLRIF FICL IALVVIATDKL LIDG ++TFNDV GYR+      +   +   +L   I++ V  +   ++  P +N           
Subjt:  MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGP-YNFTTGFLYILCA

Query:  YPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT
        Y    ++ W      +   AAGAG AVSA+ K  ++  +E ++GD       +D+QK L++DFFD+ANIA+AILFLAFLS+ATLLLLSPFNRIKP P  T
Subjt:  YPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPT

Query:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPE
        QDLEA + +AQK +AQS QAQ  EAQ+P+
Subjt:  QDLEAQNLEAQKHEAQSSQAQSTEAQTPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAGGAAAGGGATGGGATGTACTTAAAAAGGCAAAGTCAGGGAAGCTCAATGGATCCCAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCAT
TTGTCTCCTCATCGCCCTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCATGGATACAGGTTCTCTGCTCTGCCCA
TCAATCTCATCTGCAATAATAATCATTACAAACTCACTACCATCATTTTTCATACTGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGG
TTTCTCTATATACTATGTGCTTACCCAAAACATACCCTTTTGGAATGGGCTTCCACAATTCAACTACTACGCAGACCAGCGGCTGGGGCTGGCTTTGCGGTCTCCGCAGA
GCTGAAAAGATTCGTGGATTCAAGAATTGAGAAGGAACTTGGGGATTATGGTTTCTTCAGTCCAGAAGTGGATGAGCAGAAATCTTTGATAGATGATTTCTTCGATAAGG
CCAATATTGCCACTGCCATTCTCTTCCTCGCTTTCCTCTCTATGGCCACTCTCCTCCTTCTCTCTCCTTTCAATCGGATCAAACCAACTCCTCTCCCCACACAAGATCTC
GAGGCCCAGAACCTCGAGGCCCAAAAGCATGAGGCCCAATCTTCCCAGGCCCAATCTACGGAGGCCCAAACACCGGAGCCCCCTTCCGGT
mRNA sequenceShow/hide mRNA sequence
AATGCAAGAGGAAAGGGATGGGATGTACTTAAAAAGGCAAAGTCAGGGAAGCTCAATGGATCCCAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCA
TTTGTCTCCTCATCGCCCTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCATGGATACAGGTTCTCTGCTCTGCCC
ATCAATCTCATCTGCAATAATAATCATTACAAACTCACTACCATCATTTTTCATACTGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGG
GTTTCTCTATATACTATGTGCTTACCCAAAACATACCCTTTTGGAATGGGCTTCCACAATTCAACTACTACGCAGACCAGCGGCTGGGGCTGGCTTTGCGGTCTCCGCAG
AGCTGAAAAGATTCGTGGATTCAAGAATTGAGAAGGAACTTGGGGATTATGGTTTCTTCAGTCCAGAAGTGGATGAGCAGAAATCTTTGATAGATGATTTCTTCGATAAG
GCCAATATTGCCACTGCCATTCTCTTCCTCGCTTTCCTCTCTATGGCCACTCTCCTCCTTCTCTCTCCTTTCAATCGGATCAAACCAACTCCTCTCCCCACACAAGATCT
CGAGGCCCAGAACCTCGAGGCCCAAAAGCATGAGGCCCAATCTTCCCAGGCCCAATCTACGGAGGCCCAAACACCGGAGCCCCCTTCCGGT
Protein sequenceShow/hide protein sequence
MQEERDGMYLKRQSQGSSMDPKVVALIGVGLRIFIFICLLIALVVIATDKLALIDGFKATFNDVHGYRFSALPINLICNNNHYKLTTIIFHTVRIVCCNYRVGPYNFTTG
FLYILCAYPKHTLLEWASTIQLLRRPAAGAGFAVSAELKRFVDSRIEKELGDYGFFSPEVDEQKSLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPTPLPTQDL
EAQNLEAQKHEAQSSQAQSTEAQTPEPPSG