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Lsi02G000170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G000170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane 9 superfamily member
Genome locationchr02:237281..238127
RNA-Seq ExpressionLsi02G000170
SyntenyLsi02G000170
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0098588 - bounding membrane of organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7899780.1 unnamed protein product [Brassica rapa]1.6e-0644.16Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGT
        I  +RWV+  +YL +L +LLLR +R+VW++ANI+ LR+HGL LL +L +AR           +SH+PV+Q+R +L +
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGT

KAB5560816.1 hypothetical protein DKX38_005773 [Salix brachista]2.8e-1151.28Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGTH
        +F L W+NWL+ L +L VLLL  +RYVW++AN+IFL LHG+ LLW LP A  +WF      C  ++P+ QVRV  G+H
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGTH

KAB5560817.1 hypothetical protein DKX38_005774 [Salix brachista]6.2e-1152.05Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRV
        +F LRW+NW+++L +L VLLL  +RYV ++AN+IFL LHG+ LLW LP A  +WFS    F   H+P +QVR+
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRV

MBA0734305.1 hypothetical protein [Gossypium gossypioides]1.5e-0953.52Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQV
        +F L W+NW +YLC+L VLLL  +RYVW YAN++ L LHG+ LL +LP A    F      CASHI V+QV
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQV

RWW51199.1 hypothetical protein BHE74_00042481 [Ensete ventricosum]1.2e-0650Show/hide
Query:  LRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQV
        +R +NW I + +L +LLL  LR+V VYA+I    +HGL LLW+LP+A   W    FA CA HI +HQV
Subjt:  LRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQV

TrEMBL top hitse value%identityAlignment
A0A0A9TK16 Uncharacterized protein4.5e-0750.75Show/hide
Query:  VNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRV
        ++W I+L +L +LL RP+R+V ++A+++ LRLH L LLWLLP A         A CA+H+PVHQVRV
Subjt:  VNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRV

A0A5N5N0L4 Transmembrane 9 superfamily member3.0e-1152.05Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRV
        +F LRW+NW+++L +L VLLL  +RYV ++AN+IFL LHG+ LLW LP A  +WFS    F   H+P +QVR+
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRV

A0A5N5N3L5 Transmembrane 9 superfamily member1.4e-1151.28Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGTH
        +F L W+NWL+ L +L VLLL  +RYVW++AN+IFL LHG+ LLW LP A  +WF      C  ++P+ QVRV  G+H
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGTH

A0A7J9BD90 Transmembrane 9 superfamily member7.4e-1053.52Show/hide
Query:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQV
        +F L W+NW +YLC+L VLLL  +RYVW YAN++ L LHG+ LL +LP A    F      CASHI V+QV
Subjt:  IFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQV

A9NKA2 Uncharacterized protein2.2e-0642.86Show/hide
Query:  VNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVH
        +NW + + +L +LLL  + Y W++A++I L +HGL +LWLLP+A + W    F FC+ +IP+H
Subjt:  VNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACTAGAATATTTAGATTGCATTTACGTGCTAGTATTGGCAAGATCTTTTCTTTGCGGTGGGTCAACTGGCTTATTTATCTATGCGTATTGTTTGTACTACTACT
ACGCCCGCTCAGATATGTCTGGGTTTATGCAAACATCATTTTTCTTCGGCTACATGGCTTGTGTCTGCTATGGCTTCTTCCTGATGCTCGGAGCTATTGGTTTTCGAGCA
GCTTTGCTTTTTGTGCGTCACATATACCGGTCCATCAAGTGCGAGTAGTCCTGGGTACCCATCACTCAATACTGAGAAGACGAATTATGTTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACTAGAATATTTAGATTGCATTTACGTGCTAGTATTGGCAAGATCTTTTCTTTGCGGTGGGTCAACTGGCTTATTTATCTATGCGTATTGTTTGTACTACTACT
ACGCCCGCTCAGATATGTCTGGGTTTATGCAAACATCATTTTTCTTCGGCTACATGGCTTGTGTCTGCTATGGCTTCTTCCTGATGCTCGGAGCTATTGGTTTTCGAGCA
GCTTTGCTTTTTGTGCGTCACATATACCGGTCCATCAAGTGCGAGTAGTCCTGGGTACCCATCACTCAATACTGAGAAGACGAATTATGTTTCTTTAACTTTTCATATTC
GTAGGTTTCTATGTAGAAAAGTTACCTGCAGCAGTCCTTTTTTTTGTTCTTTTTGGTGATATGTCTTGGAAAGGGAACAGCAATTTCTTTAGATATTTTGCTCTAAGAGC
AGAGCAGCAGCATGGTGGCAGGATGGATGACCGTGCCAGGCACGAACTTGGGGAACGGAGTTTGTACCATTACATTAGTTGCAACACTTTTGTTTTAATCTGAACTTTGT
CCAATACATTATTATTGTTCTTCCTCTCAAGTGTCTAACACCCTTTTATGATGAAATACTCGTCCGGTCCAGGAATTCAACGTCCATTGTTCCTCAATTTTTATTTAAAC
CAGAAATAAGTTCACTCG
Protein sequenceShow/hide protein sequence
MNTRIFRLHLRASIGKIFSLRWVNWLIYLCVLFVLLLRPLRYVWVYANIIFLRLHGLCLLWLLPDARSYWFSSSFAFCASHIPVHQVRVVLGTHHSILRRRIMFL