; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G000220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G000220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA polymerase epsilon subunit
Genome locationchr02:275676..276899
RNA-Seq ExpressionLsi02G000220
SyntenyLsi02G000220
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006536 - glutamate metabolic process (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0051781 - positive regulation of cell division (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004351 - glutamate decarboxylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsIPR016266 - DNA polymerase epsilon, subunit B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036041.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]1.4e-10588.69Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAIELVLD+LH+ESLKS IL+KD VHRV++ +LAA+E  E SP T+TST+ALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIFH HTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIFYDV
        TASVEINLSNAISFTG FYD+
Subjt:  TASVEINLSNAISFTGIFYDV

TYJ98844.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]2.5e-10589.09Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAIELVLD+LH+ESLKS IL+KD VHRV++ +LAA+E  E SP T+TST+ALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIFH HTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIFYD
        TASVEINLSNAISFTG FYD
Subjt:  TASVEINLSNAISFTGIFYD

XP_011657177.1 DNA polymerase epsilon subunit B [Cucumis sativus]1.7e-10188.99Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MDTLTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSR HG ED+AIE VLDNLH+ESLKS ILDKDAVHRV++IM+AAD+VGEESP T+TSTSALCIINAF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         I KFRYDPIKKIF LHT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIF
        TASVEINLS+A   TG+F
Subjt:  TASVEINLSNAISFTGIF

XP_016899382.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]7.4e-10287.61Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAIELVLD+LH+ESLKS IL+KD VHRV++ +LAA+E  E SP T+TST+ALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIFH HTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIF
        TASVEINLSNA   TG+F
Subjt:  TASVEINLSNAISFTGIF

XP_038894268.1 DNA polymerase epsilon subunit B [Benincasa hispida]6.3e-10993.12Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAI+LVLDNLHDESLKSSILDKDAVHRVV+IMLAADEVGEESP T+TSTSALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIF+LHTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIF
        TASVEINLSNA   TG+F
Subjt:  TASVEINLSNAISFTGIF

TrEMBL top hitse value%identityAlignment
A0A0A0LUV9 Uncharacterized protein1.3e-10789.87Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MDTLTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSR HG ED+AIE VLDNLH+ESLKS ILDKDAVHRV++IM+AAD+VGEESP T+TSTSALCIINAF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         I KFRYDPIKKIF LHT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIFYDVEKFKLV
        TASVEINLS+AISFTG FYDVEK +LV
Subjt:  TASVEINLSNAISFTGIFYDVEKFKLV

A0A1S4DTQ5 DNA polymerase epsilon subunit3.6e-10287.61Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAIELVLD+LH+ESLKS IL+KD VHRV++ +LAA+E  E SP T+TST+ALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIFH HTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIF
        TASVEINLSNA   TG+F
Subjt:  TASVEINLSNAISFTGIF

A0A5A7T342 Glutamate decarboxylase7.0e-10688.69Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAIELVLD+LH+ESLKS IL+KD VHRV++ +LAA+E  E SP T+TST+ALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIFH HTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIFYDV
        TASVEINLSNAISFTG FYD+
Subjt:  TASVEINLSNAISFTGIFYDV

A0A5D3BIF9 Glutamate decarboxylase1.2e-10589.09Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD LTLR+KVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAIELVLD+LH+ESLKS IL+KD VHRV++ +LAA+E  E SP T+TST+ALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISKFRYDPIKKIFH HTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIFYD
        TASVEINLSNAISFTG FYD
Subjt:  TASVEINLSNAISFTGIFYD

A0A6J1KGF0 DNA polymerase epsilon subunit8.3e-9986.24Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF
        MD  TLRRKVQRK+KIRG YSIKL+AL EIVSF SRF GCEDDAI+LVLD+LHDESL+SSI+DKDAVHRVV+I+LAADE GEE P T TSTSALCII+AF
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAF

Query:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
         ISK+RYDPIKKIF++HTGSLPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  YISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGIF
        TASVEINLS+A   TG+F
Subjt:  TASVEINLSNAISFTGIF

SwissProt top hitse value%identityAlignment
A7YWS7 DNA polymerase epsilon subunit 22.1e-1427.93Show/hide
Query:  LRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISK
        LR +     K+RGL  ++ EA+  +   +   +  E +DA+E ++D +  + L S+++++  V        A  E  +    T+       II AF I +
Subjt:  LRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISK

Query:  FRYDPIKKIF----HLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY
        F Y+  +K F      +  +  + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++  I++L+G T   G   V+G+I+Q+++G F+
Subjt:  FRYDPIKKIF----HLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY

Query:  LEDLTASVEINLSNAISFTGIF
        LED T +++++LS A   +G++
Subjt:  LEDLTASVEINLSNAISFTGIF

O94263 DNA polymerase epsilon subunit B2.3e-1329.32Show/hide
Query:  TVTSTSALCIINAFYISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVM-G
        T+ +     +++AF + KF+YD  +K+F L   S  +   A A   +   RF ++  R+ R++ F  P+F    S  G+ +++PI++L+G+ G  +++ G
Subjt:  TVTSTSALCIINAFYISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVM-G

Query:  VISQMEDGHFYLEDLTASVEINLSNAISFTGIF
        +++   DG  +LEDL + V++++S A    G+F
Subjt:  VISQMEDGHFYLEDLTASVEINLSNAISFTGIF

Q500V9 DNA polymerase epsilon subunit B3.6e-5959.15Show/hide
Query:  RRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCED-DAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKF
        R+K+Q+K K RG Y++K +ALDEI+ F  +F   +D +AI+L+LDNL  E+ KSS +D ++V  ++N +L A    EE PT  TS S+L II+AF + KF
Subjt:  RRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCED-DAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKF

Query:  RYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE
         YD +KK F+ HT SLPIHG+A AK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLEDL+ASVE
Subjt:  RYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE

Query:  INLSNAISFTGIF
        I+LS A   TG F
Subjt:  INLSNAISFTGIF

Q54Y85 DNA polymerase epsilon subunit 29.0e-1830.43Show/hide
Query:  RRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDK-DAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKF
        ++++ +   + G +SIK +A+  I++ +      E   I  ++DNL     KS  L   +   ++++ + ++D + +E         AL +I+AF    F
Subjt:  RRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDK-DAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKF

Query:  RYDPIKKIF-HLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASV
         +D   K F         +HG + +K+ LYR R+L + QR  R+ +FS P             I+P+ SL+G TGRK V+G ISQ+E+  FY+EDL  +V
Subjt:  RYDPIKKIF-HLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASV

Query:  EINLSNA
        +I++S A
Subjt:  EINLSNA

Q5ZKQ6 DNA polymerase epsilon subunit 26.1e-1428.14Show/hide
Query:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIELVLDNLHDESLKSSILDKDAVHRVV-NIMLAADEVGEESPTTVTSTSALCIIN
        M+   LRR++    ++RGL  ++ EA+  +   +   +  E +D I+ ++D +  + L +++++   V   V     A DE         T  +   II 
Subjt:  MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIELVLDNLHDESLKSSILDKDAVHRVV-NIMLAADEVGEESPTTVTSTSALCIIN

Query:  AFYISKFRYDPIKKIF-HLHTGSLPI---HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQSLVGQTGR---KWVMGVI
        AF I ++ Y+P +K F  L   +LP+    G A  KA L+R+R+ +L QR  R + F+  A     D   S F   ++  +++L+G T +     V+G+I
Subjt:  AFYISKFRYDPIKKIF-HLHTGSLPI---HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQSLVGQTGR---KWVMGVI

Query:  SQMEDGHFYLEDLTASVEINLSNAISFTGIF
        +Q+++G ++LED T  V+++LS A   +G++
Subjt:  SQMEDGHFYLEDLTASVEINLSNAISFTGIF

Arabidopsis top hitse value%identityAlignment
AT5G22110.1 DNA polymerase epsilon subunit B22.6e-6059.15Show/hide
Query:  RRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCED-DAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKF
        R+K+Q+K K RG Y++K +ALDEI+ F  +F   +D +AI+L+LDNL  E+ KSS +D ++V  ++N +L A    EE PT  TS S+L II+AF + KF
Subjt:  RRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCED-DAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKF

Query:  RYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE
         YD +KK F+ HT SLPIHG+A AK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLEDL+ASVE
Subjt:  RYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE

Query:  INLSNAISFTGIF
        I+LS A   TG F
Subjt:  INLSNAISFTGIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACATTAACTCTGAGGAGAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTAGAAGCTCTTGATGAGATTGTTTCCTTCGTTTCTCGCTT
CCATGGCTGTGAAGATGATGCTATAGAGCTTGTTCTCGACAATCTTCATGATGAATCTTTGAAATCTTCGATATTAGATAAGGATGCGGTGCATCGGGTTGTAAACATTA
TGCTTGCAGCTGATGAAGTGGGAGAAGAAAGTCCCACTACCGTTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTTATATCTCCAAGTTTCGTTATGATCCCATC
AAAAAGATCTTCCATCTACACACTGGAAGCCTTCCAATTCATGGGGATGCTCCCGCTAAAGCTGCTCTATATAGAGATAGGTTTCTTCTGCTTTCCCAAAGGCTCTCCCG
AGATCAGCATTTCTCCAAACCCGCTTTTGACATTGGCATGTCTCATTTCGGAAGTTGTGAGATTTCTCCTATTCAATCTCTGGTGGGGCAAACAGGGAGAAAATGGGTCA
TGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAATGCTATATCCTTTACTGGCATCTTCTATGAT
GTGGAAAAATTTAAACTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACATTAACTCTGAGGAGAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTAGAAGCTCTTGATGAGATTGTTTCCTTCGTTTCTCGCTT
CCATGGCTGTGAAGATGATGCTATAGAGCTTGTTCTCGACAATCTTCATGATGAATCTTTGAAATCTTCGATATTAGATAAGGATGCGGTGCATCGGGTTGTAAACATTA
TGCTTGCAGCTGATGAAGTGGGAGAAGAAAGTCCCACTACCGTTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTTATATCTCCAAGTTTCGTTATGATCCCATC
AAAAAGATCTTCCATCTACACACTGGAAGCCTTCCAATTCATGGGGATGCTCCCGCTAAAGCTGCTCTATATAGAGATAGGTTTCTTCTGCTTTCCCAAAGGCTCTCCCG
AGATCAGCATTTCTCCAAACCCGCTTTTGACATTGGCATGTCTCATTTCGGAAGTTGTGAGATTTCTCCTATTCAATCTCTGGTGGGGCAAACAGGGAGAAAATGGGTCA
TGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAATGCTATATCCTTTACTGGCATCTTCTATGAT
GTGGAAAAATTTAAACTTGTTTGA
Protein sequenceShow/hide protein sequence
MDTLTLRRKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIELVLDNLHDESLKSSILDKDAVHRVVNIMLAADEVGEESPTTVTSTSALCIINAFYISKFRYDPI
KKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGIFYD
VEKFKLV