; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G000290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G000290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description17.8 kDa class I heat shock protein-like
Genome locationchr02:347116..347708
RNA-Seq ExpressionLsi02G000290
SyntenyLsi02G000290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR007052 - CS domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137386.1 18.1 kDa class I heat shock protein [Cucumis sativus]7.5e-6779.17Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA
        MEKGEPS+V Y +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L AKDGKKMHFNR+IKLPKD+ P++IRAKFGG++LSITMPKKA
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA

Query:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        S PEIS P+PD  S+ KLT SN N KPKNFIS+L SPLSRLKFSK +ATAMA AVVI+A GVYYLIKN
Subjt:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

XP_008465577.1 PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo]5.4e-7386.9Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA
        MEKGEPS V YEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILT+SGEHLTAKDGKKMHFNREIKLPKDI P++IRAKFGG+VLSITMPKKA
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA

Query:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        S PEIS P+PD  S+ KLT SN N KPKNFISRL SPLSRLKFSKE+ATAMA AVVI+A GVYYLIKN
Subjt:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

XP_022923784.1 17.8 kDa class I heat shock protein-like [Cucurbita moschata]6.3e-6682.35Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        MEKGE SNVSYEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHL A DGKKM FNREIKLPKDI P+QIRAKFGGSVLSITMPK
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Query:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        K SS E S P  DA S+G  TA ND+ KPKN ISRLTSPLSRLKFSK+ ATA+AAAVVI+AFG YYLIKN
Subjt:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

XP_023001660.1 17.8 kDa class I heat shock protein-like [Cucurbita maxima]3.4e-6781.18Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        MEKGE SNVSYEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHLTA DGKKM FNREIKLPKDI P+QIRAKFGGSVLSITMPK
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Query:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        K SS EI  P  DA S+G  TA ND+ +PKN ISRLTSPLSRLKFSK+ ATA+AAAV+I+AFG YYL+KN
Subjt:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

XP_023520341.1 17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]3.7e-6682.35Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        MEKGE SNVSYEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHL A DGKKM FNREIKLPKDI P+QIRAKFGGSVLSITMPK
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Query:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        K SS EI  P  DA S+G  TA ND+ KPKN ISRLTSPLSRLKFSK+ ATA+AAAVVI+AFG YYLIKN
Subjt:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

TrEMBL top hitse value%identityAlignment
A0A0A0LT66 SHSP domain-containing protein3.6e-6779.17Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA
        MEKGEPS+V Y +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L AKDGKKMHFNR+IKLPKD+ P++IRAKFGG++LSITMPKKA
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA

Query:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        S PEIS P+PD  S+ KLT SN N KPKNFIS+L SPLSRLKFSK +ATAMA AVVI+A GVYYLIKN
Subjt:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

A0A1S3CP71 16.9 kDa class I heat shock protein 12.6e-7386.9Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA
        MEKGEPS V YEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILT+SGEHLTAKDGKKMHFNREIKLPKDI P++IRAKFGG+VLSITMPKKA
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA

Query:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        S PEIS P+PD  S+ KLT SN N KPKNFISRL SPLSRLKFSKE+ATAMA AVVI+A GVYYLIKN
Subjt:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

A0A5D3BHU7 16.9 kDa class I heat shock protein 12.6e-7386.9Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA
        MEKGEPS V YEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILT+SGEHLTAKDGKKMHFNREIKLPKDI P++IRAKFGG+VLSITMPKKA
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKA

Query:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        S PEIS P+PD  S+ KLT SN N KPKNFISRL SPLSRLKFSKE+ATAMA AVVI+A GVYYLIKN
Subjt:  SSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

A0A6J1E7D1 17.8 kDa class I heat shock protein-like3.1e-6682.35Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        MEKGE SNVSYEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHL A DGKKM FNREIKLPKDI P+QIRAKFGGSVLSITMPK
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Query:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        K SS E S P  DA S+G  TA ND+ KPKN ISRLTSPLSRLKFSK+ ATA+AAAVVI+AFG YYLIKN
Subjt:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

A0A6J1KLT1 17.8 kDa class I heat shock protein-like1.6e-6781.18Show/hide
Query:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        MEKGE SNVSYEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHLTA DGKKM FNREIKLPKDI P+QIRAKFGGSVLSITMPK
Subjt:  MEKGEPSNVSYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Query:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN
        K SS EI  P  DA S+G  TA ND+ +PKN ISRLTSPLSRLKFSK+ ATA+AAAV+I+AFG YYL+KN
Subjt:  KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN

SwissProt top hitse value%identityAlignment
P12810 16.9 kDa class I heat shock protein 13.7e-0834.02Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGK--KMH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPK-KASSPEI
        WK+  ++ V +V LP  KKEE++V +++ ++L VSGE    K+ K  K H        F R  +LP+D    +++A     VL++T+PK +   PE+
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGK--KMH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPK-KASSPEI

P31673 17.4 kDa class I heat shock protein4.8e-0832.22Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGK--KMH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPKK
        WK+  ++ V +  +P  KKEE++V +++ ++L +SGE +  ++ K  K H        F R  +LP++  P QI+A     VL++T+PK+
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGK--KMH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPKK

Q9LNW0 17.8 kDa class I heat shock protein5.7e-0933.71Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK----------MHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        WK+  ++ V +  LP  KKEE++V I+++S+L +SGE    K+ K+            F+R+ KLP+++  +Q++A     VL++T+PK
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK----------MHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Q9XIE3 17.6 kDa class I heat shock protein 11.7e-0833.71Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK--MH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPK
        WK+  ++ V +  LP  KKEE++V I+++S+L +SGE    K+ K+   H        F+R+ +LP+++  +Q++A     VL++T+PK
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK--MH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPK

Q9ZW31 17.6 kDa class I heat shock protein 28.2e-0831.46Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGK----------KMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        W++  ++ V +  LP  KKEE++V I+ +S+L +SGE    K+ K             F R  +LP+++  +Q++A     VL++T+PK
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGK----------KMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

Arabidopsis top hitse value%identityAlignment
AT1G07400.1 HSP20-like chaperones superfamily protein4.0e-1033.71Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK----------MHFNREIKLPKDINPNQIRAKFGGSVLSITMPK
        WK+  ++ V +  LP  KKEE++V I+++S+L +SGE    K+ K+            F+R+ KLP+++  +Q++A     VL++T+PK
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK----------MHFNREIKLPKDINPNQIRAKFGGSVLSITMPK

AT1G54400.1 HSP20-like chaperones superfamily protein1.8e-1835.88Show/hide
Query:  YEEFEPFCKWKKLEDSDVLEVHLPE-FKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK-----------
        Y+E EPFC+W++ ED D+LE+HLP   KKE L+++I N+ +LT++G        K + F +E K+ KD   N+IRAKF   VL +TMPK           
Subjt:  YEEFEPFCKWKKLEDSDVLEVHLPE-FKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK-----------

Query:  -KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIK
         K ++P+   P  D   +G    +N +     F S+  S   RL   +++     AAVV+VA  V  ++K
Subjt:  -KASSPEISLPSPDAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIK

AT1G59860.1 HSP20-like chaperones superfamily protein1.2e-0933.71Show/hide
Query:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK--MH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPK
        WK+  ++ V +  LP  KKEE++V I+++S+L +SGE    K+ K+   H        F+R+ +LP+++  +Q++A     VL++T+PK
Subjt:  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKK--MH--------FNREIKLPKDINPNQIRAKFGGSVLSITMPK

AT2G27140.1 HSP20-like chaperones superfamily protein1.1e-1033.65Show/hide
Query:  SNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKASSPEIS
        +N  Y+EFEP   WK  +  + L ++LP F+KE+L+V++     L V G+   A   K + F +E  +P +I+ + + AKF G+ L + +P+  + P   
Subjt:  SNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKASSPEIS

Query:  LPSP
         PSP
Subjt:  LPSP

AT5G20970.1 HSP20-like chaperones superfamily protein1.2e-0935.64Show/hide
Query:  YEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK-KASSPEISLPS
        Y+EFEP  +W    D++VL   LP FKKE+L+V +     L ++GE  T    K + F++EI +P  ++ + + A F  + L I  PK K   P+   P+
Subjt:  YEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPK-KASSPEISLPS

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGGTGAACCATCGAATGTGTCGTACGAAGAATTCGAGCCTTTCTGCAAATGGAAAAAACTCGAAGACTCCGACGTTCTTGAGGTTCATCTCCCAGAATTCAA
GAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACAGTTTCCGGCGAGCACCTGACAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGAAATCAAAC
TCCCAAAGGATATAAACCCAAACCAAATACGTGCTAAATTCGGTGGCTCTGTTCTTTCGATCACGATGCCTAAGAAAGCCAGCTCGCCGGAAATCAGCCTACCAAGCCCA
GATGCCGTCTCTGACGGTAAACTAACAGCATCTAATGATAATGTTAAGCCAAAGAACTTCATATCCAGGTTAACAAGTCCATTATCGAGGTTGAAATTTAGCAAGGAATC
AGCGACGGCTATGGCGGCGGCAGTGGTGATTGTGGCCTTTGGAGTTTACTACTTGATTAAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGGTGAACCATCGAATGTGTCGTACGAAGAATTCGAGCCTTTCTGCAAATGGAAAAAACTCGAAGACTCCGACGTTCTTGAGGTTCATCTCCCAGAATTCAA
GAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACAGTTTCCGGCGAGCACCTGACAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGAAATCAAAC
TCCCAAAGGATATAAACCCAAACCAAATACGTGCTAAATTCGGTGGCTCTGTTCTTTCGATCACGATGCCTAAGAAAGCCAGCTCGCCGGAAATCAGCCTACCAAGCCCA
GATGCCGTCTCTGACGGTAAACTAACAGCATCTAATGATAATGTTAAGCCAAAGAACTTCATATCCAGGTTAACAAGTCCATTATCGAGGTTGAAATTTAGCAAGGAATC
AGCGACGGCTATGGCGGCGGCAGTGGTGATTGTGGCCTTTGGAGTTTACTACTTGATTAAAAACTAA
Protein sequenceShow/hide protein sequence
MEKGEPSNVSYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTVSGEHLTAKDGKKMHFNREIKLPKDINPNQIRAKFGGSVLSITMPKKASSPEISLPSP
DAVSDGKLTASNDNVKPKNFISRLTSPLSRLKFSKESATAMAAAVVIVAFGVYYLIKN