CuGenDBv2

Gene ID	Lsi02G000310
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	DUF4408 domain protein
Genome location	chr02:357079..358023
RNA-Seq Expression	Lsi02G000310
Synteny	Lsi02G000310
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR025520 - Domain of unknown function DUF4408

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6584433.1 hypothetical protein SDJN03_20365, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-120

78.48

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVSFRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENTHV+ASTPYK THEDR+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKFSDPSS K CAY  EKVEEE+D GGGGG
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ
        D DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA    A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Subjt:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ

Query:  RQESEQRFLQAMKRSF
        RQESEQRFLQAM+RSF
Subjt:  RQESEQRFLQAMKRSF

KAG7020020.1 hypothetical protein SDJN02_18988, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.4e-120

78.16

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVSFRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENTHV+ASTPYK THEDR+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKF DPSS K CAY  EKVEEE+D GGGGG
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ
        D DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA    A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Subjt:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ

Query:  RQESEQRFLQAMKRSF
        RQESEQRFLQAM+RSF
Subjt:  RQESEQRFLQAMKRSF

XP_004137570.1 uncharacterized protein LOC101216148 [Cucumis sativus]

4.0e-130

83.6

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DP  KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFA+LL  TLPRL+ SFR WLSPPYVFIVFN L+ AAFASS FRRQKDTSETNYTP
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENT+VS S PYKLTHEDRDFSI  RSGEIWNGI DEDE+GKEEEEE         K +KWDFPTLFTEKFSDPSS+K CAYS E  EEEK+ GGGG 
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE
        DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA  +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Subjt:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE

Query:  QRFLQAMKRSF
        QRFLQAMKRSF
Subjt:  QRFLQAMKRSF

XP_016898842.1 PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo]

1.1e-132

85.53

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPS KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFASL   TLPRL+VSFR WLSPPYVFIVFNFL+VAA ASS FRRQKDTSET +TP
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENT+VS S PYKLTHEDRDFSI  RSGEIWNGISDEDEQ KEEEEE         K +KWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKD G  G 
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE
        DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA  +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Subjt:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE

Query:  QRFLQAMKRSF
        QRFLQAMKRSF
Subjt:  QRFLQAMKRSF

XP_022923785.1 uncharacterized protein LOC111431395 [Cucurbita moschata]

1.7e-120

78.48

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVSFRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENTHV+ASTPYK THEDR+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKFSDPSS K CAY  EKVEEE+D GGGGG
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ
        D DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA    A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Subjt:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ

Query:  RQESEQRFLQAMKRSF
        RQESEQRFLQAM+RSF
Subjt:  RQESEQRFLQAMKRSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ95 Uncharacterized protein

1.9e-130

83.6

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DP  KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFA+LL  TLPRL+ SFR WLSPPYVFIVFN L+ AAFASS FRRQKDTSETNYTP
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENT+VS S PYKLTHEDRDFSI  RSGEIWNGI DEDE+GKEEEEE         K +KWDFPTLFTEKFSDPSS+K CAYS E  EEEK+ GGGG 
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE
        DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA  +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Subjt:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE

Query:  QRFLQAMKRSF
        QRFLQAMKRSF
Subjt:  QRFLQAMKRSF

A0A1S4DS64 uncharacterized protein LOC103503737

5.4e-133

85.53

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPS KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFASL   TLPRL+VSFR WLSPPYVFIVFNFL+VAA ASS FRRQKDTSET +TP
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENT+VS S PYKLTHEDRDFSI  RSGEIWNGISDEDEQ KEEEEE         K +KWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKD G  G 
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE
        DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA  +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Subjt:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE

Query:  QRFLQAMKRSF
        QRFLQAMKRSF
Subjt:  QRFLQAMKRSF

A0A5A7T393 DUF4408 domain protein

5.4e-133

85.53

Show/hide

Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPS KPVF GLTLETAIS+TKS+LLAIG ISTVILFKVAIIPKFASL   TLPRL+VSFR WLSPPYVFIVFNFL+VAA ASS FRRQKDTSET +TP
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENT+VS S PYKLTHEDRDFSI  RSGEIWNGISDEDEQ KEEEEE         K +KWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKD G  G 
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE
        DDSMEATWKAIMER+ KQTPQLKKSQTWDSP PARLIRAA  +EEPVAWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNR IRLQRQESE
Subjt:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESE

Query:  QRFLQAMKRSF
        QRFLQAMKRSF
Subjt:  QRFLQAMKRSF

A0A6J1ECW6 uncharacterized protein LOC111431395

8.2e-121

78.48

Show/hide

Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M DPSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ TTLPRLWVSFRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE NY  
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENTHV+ASTPYK THEDR+FSI   S EIW+ I  EDEQGKE EE++EEE     KPVKWDFPTLFTEKFSDPSS K CAY  EKVEEE+D GGGGG
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ
        D DSM+ATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA    A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQ
Subjt:  D-DSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQ

Query:  RQESEQRFLQAMKRSF
        RQESEQRFLQAM+RSF
Subjt:  RQESEQRFLQAMKRSF

A0A6J1KH91 uncharacterized protein LOC111495736

8.7e-115

75.8

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Query:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP
        M  PSPKPV   +TLETAISVTKSIL+++G+IST+ILFKVA+IPK A+L+ +TLPRLWVSFRLWLSPPY+FIVFNF+I A  ASS FRRQKD SE  Y  
Subjt:  MPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTP

Query:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG
        ISHENTHV+ASTPYK TH+DR+FSI   S EIW+ I  EDEQGK+ EE++EEE     KPVKWDFPTL TEKFSDPSS K CAY  EKVEEE+D  GGGG
Subjt:  ISHENTHVSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGG

Query:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQR
         DSM+ATW AIMEREGKQTPQLKKSQTWDSPPPARLIRA    A  +E+PVAW RNEVRKSE+F QTLSFRRK+S+TSEELKSRAEAFIEMVN+ IRLQR
Subjt:  DDSMEATWKAIMEREGKQTPQLKKSQTWDSPPPARLIRA----AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQR

Query:  QESEQRFLQAMKRS
        QESEQRFLQAM+RS
Subjt:  QESEQRFLQAMKRS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G61260.1 Protein of unknown function (DUF761)

7.3e-05

26.32

Show/hide

Query:  TKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSA-FRRQKDTSETNYT--------PISHENTHVSAST
        TK++L++ G+ +  +L K++ +P       +  P LW S   WL PPY+++V N +I+   ASS  +R   D  E +           I  E   V+   
Subjt:  TKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSA-FRRQKDTSETNYT--------PISHENTHVSAST

Query:  PYKLTHEDRDFSIRARSGEIWNGISDEDEQGK-------EEEEEE----------EEEEEEESKP---------VKWDF--PTLFTEKFSDPSSEK---F
              E +D    A  G +   +  E+ + +       ++EEEE          E+E EEE K          V+ D   P +  E  + P  EK    
Subjt:  PYKLTHEDRDFSIRARSGEIWNGISDEDEQGK-------EEEEEE----------EEEEEEESKP---------VKWDF--PTLFTEKFSDPSSEK---F

Query:  CAYSSEKVEEEKDIGGGG-------GDDSMEATWKAIMEREGKQTP---QL-KKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQ---TLSFR
          +   K+ +    GG          ++++E TWK I   EGK TP   QL ++S T+             G+ +PV    +  R    + Q   T   R
Subjt:  CAYSSEKVEEEKDIGGGG-------GDDSMEATWKAIMEREGKQTP---QL-KKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQ---TLSFR

Query:  RKISMTSEELKSRAEAFIEMVNRGIRLQRQESEQRFLQAMKR
        ++ S++ EEL  R EAFI+  N  ++LQR ES +++ +   R
Subjt:  RKISMTSEELKSRAEAFIEMVNRGIRLQRQESEQRFLQAMKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGCTCATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGCTCATATCCAC
TGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTACGACAACTCTTCCTCGATTATGGGTCTCCTTCAGATTATGGCTCTCTCCTCCTTACGTCT
TCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGCCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAACTAATTACACTCCCATTTCTCATGAAAATACTCAT
GTGTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGATCCGTGCTCGTTCCGGAGAAATCTGGAATGGGATCTCGGACGAGGATGAACAGGGGAA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTAAACCGGTAAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGT
TTTGTGCATATTCCAGCGAGAAGGTGGAGGAGGAAAAAGATATCGGGGGCGGCGGTGGCGATGACTCGATGGAGGCCACTTGGAAGGCGATCATGGAAAGGGAAGGGAAA
CAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTCCGCCGGCACGCTTAATTAGAGCCGCCGGTGGCGACGAGGAGCCAGTGGCGTGGGATCGGAATGAGGT
AAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAGATATCGATGACTTCGGAAGAACTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGG
GCATCCGGTTACAGAGGCAAGAATCAGAGCAGCGATTCTTGCAGGCAATGAAACGTAGCTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MELMPDPSPKPVFQGLTLETAISVTKSILLAIGLISTVILFKVAIIPKFASLLTTTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFASSAFRRQKDTSETNYTPISHENTH
VSASTPYKLTHEDRDFSIRARSGEIWNGISDEDEQGKEEEEEEEEEEEEESKPVKWDFPTLFTEKFSDPSSEKFCAYSSEKVEEEKDIGGGGGDDSMEATWKAIMEREGK
QTPQLKKSQTWDSPPPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRGIRLQRQESEQRFLQAMKRSF

Lsi02G000310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome