| GenBank top hits | e value | %identity | Alignment |
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| KAG6607420.1 Organelle RRM domain-containing protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 3.2e-68 | 66.96 | Show/hide |
Query: RLLGETPEKTKMTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRL
RL E PEKTKMT GL F +AAP PFFQ Q+ +N+IRST T MRIQSIQS+LAY +TP PFFSV+KT SISDSPL SV CVSSSPSPSPRRY+PSTRL
Subjt: RLLGETPEKTKMTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRL
Query: YWLIFSLNCVFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEG
Y +GLSFRTTEESLRNAF SFGQL E+NLVMDKVANRPRGFAFLRYATEEESQKAIEG
Subjt: YWLIFSLNCVFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEG
Query: MHGKFLDGRVIFVEVAKSRSELRLGLKENS
MHGKFLDGRVIFVEVAKS+ ELR GLKENS
Subjt: MHGKFLDGRVIFVEVAKSRSELRLGLKENS
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| XP_008439477.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like isoform X1 [Cucumis melo] | 4.5e-70 | 69.86 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
MT GL FTVTAAPKPFF QTTHHNNIRSTETHMR QS QS+LAY STP PFFS RKT SIS+SPLFSVACVSS SPSPRRY+PSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
Query: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
+GLSFRTTEESLRNAFKSFGQL E+NLVMD+VANRPRGFAFLRYA+EEESQKAIEGMHGKFLDGRVI
Subjt: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
Query: FVEVAKSRSELRLGLKENS
FVE+AK RSELR GLKENS
Subjt: FVEVAKSRSELRLGLKENS
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| XP_011649648.1 organelle RRM domain-containing protein 6, chloroplastic isoform X1 [Cucumis sativus] | 1.9e-68 | 69.23 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSP--SPSPRRYTPSTRLYWLIFSLNC
MT GL FTVTAAPKPFFQ QTTHH++I STET MRI+SIQS+LAY STP PFFS RKT SISDS LFSVACVSSSP S SPRRYTPSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSP--SPSPRRYTPSTRLYWLIFSLNC
Query: VFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGR
+GLSFRTTEESLRNAFKSFGQL E+NLVMD++ANRPRGFAFLRYA+EEESQKAIEGMHGKFLDGR
Subjt: VFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGR
Query: VIFVEVAKSRSELRLGLKENS
VIFVEVAKSRSELR GL+ENS
Subjt: VIFVEVAKSRSELRLGLKENS
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| XP_022949592.1 organelle RRM domain-containing protein 6, chloroplastic [Cucurbita moschata] | 3.8e-69 | 67.39 | Show/hide |
Query: RLLGETPEKTKMTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRL
RL E PEKTKMT GL F +AAP PFFQ Q+ +N+IRST T MRIQSIQS+LAY +TP PFFSV+KT SISDSPLFSV CVSSSPSPSPRRY+PSTRL
Subjt: RLLGETPEKTKMTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRL
Query: YWLIFSLNCVFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEG
Y +GLSFRTTEESLRNAF SFGQL E+NLVMDKVANRPRGFAFLRYATEEESQKAIEG
Subjt: YWLIFSLNCVFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEG
Query: MHGKFLDGRVIFVEVAKSRSELRLGLKENS
MHGKFLDGRVIFVEVAKS+ ELR GLKENS
Subjt: MHGKFLDGRVIFVEVAKSRSELRLGLKENS
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| XP_038895072.1 organelle RRM domain-containing protein 6, chloroplastic isoform X1 [Benincasa hispida] | 1.6e-75 | 73.52 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
MT GL FTV AAPKPFFQFQ THHNNIRSTETH RI SI+SQLAY STP PFFSVRKTHSISDSPLFS+AC SSSPSPSPRRYTPSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
Query: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
+GLSFRTTEESLRNAFKSFGQL E+NLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
Subjt: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
Query: FVEVAKSRSELRLGLKENS
FVEVAKSRSELR GLKENS
Subjt: FVEVAKSRSELRLGLKENS
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LQB8 RRM domain-containing protein | 9.1e-69 | 69.23 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSP--SPSPRRYTPSTRLYWLIFSLNC
MT GL FTVTAAPKPFFQ QTTHH++I STET MRI+SIQS+LAY STP PFFS RKT SISDS LFSVACVSSSP S SPRRYTPSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSP--SPSPRRYTPSTRLYWLIFSLNC
Query: VFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGR
+GLSFRTTEESLRNAFKSFGQL E+NLVMD++ANRPRGFAFLRYA+EEESQKAIEGMHGKFLDGR
Subjt: VFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGR
Query: VIFVEVAKSRSELRLGLKENS
VIFVEVAKSRSELR GL+ENS
Subjt: VIFVEVAKSRSELRLGLKENS
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| A0A1S3AYF6 glycine-rich RNA-binding protein 4, mitochondrial-like isoform X1 | 2.2e-70 | 69.86 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
MT GL FTVTAAPKPFF QTTHHNNIRSTETHMR QS QS+LAY STP PFFS RKT SIS+SPLFSVACVSS SPSPRRY+PSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
Query: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
+GLSFRTTEESLRNAFKSFGQL E+NLVMD+VANRPRGFAFLRYA+EEESQKAIEGMHGKFLDGRVI
Subjt: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
Query: FVEVAKSRSELRLGLKENS
FVE+AK RSELR GLKENS
Subjt: FVEVAKSRSELRLGLKENS
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| A0A5A7SXY0 Glycine-rich RNA-binding protein 4 | 3.2e-58 | 67.69 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
MT GL FTVTAAPKPFFQ QTTHHNNIRSTETHMR QS QS+LAY STP PFFS RKT SIS+SPLFSVACVSS SPSPRRY+PSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
Query: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFL
+GLSFRTTEESLRNAFKSFGQL E+NLVMD+VANRPRGFAFLRYA+EEESQKAIEGMHGK L
Subjt: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFL
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| A0A6J1GCJ4 organelle RRM domain-containing protein 6, chloroplastic | 1.8e-69 | 67.39 | Show/hide |
Query: RLLGETPEKTKMTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRL
RL E PEKTKMT GL F +AAP PFFQ Q+ +N+IRST T MRIQSIQS+LAY +TP PFFSV+KT SISDSPLFSV CVSSSPSPSPRRY+PSTRL
Subjt: RLLGETPEKTKMTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRL
Query: YWLIFSLNCVFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEG
Y +GLSFRTTEESLRNAF SFGQL E+NLVMDKVANRPRGFAFLRYATEEESQKAIEG
Subjt: YWLIFSLNCVFRRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEG
Query: MHGKFLDGRVIFVEVAKSRSELRLGLKENS
MHGKFLDGRVIFVEVAKS+ ELR GLKENS
Subjt: MHGKFLDGRVIFVEVAKSRSELRLGLKENS
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| A0A6J1KDG6 organelle RRM domain-containing protein 6, chloroplastic-like | 9.4e-66 | 67.58 | Show/hide |
Query: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
MT GL F +A P PFFQ Q+T +NNIRST T MRIQSIQS+LAY +TP PFFSV+KT SISDSPLFSV CVSSSPSPSPRRY+PSTRLY
Subjt: MTVGLHFTVTAAPKPFFQFQTTHHNNIRSTETHMRIQSIQSQLAYGSTPRPFFSVRKTHSISDSPLFSVACVSSSPSPSPRRYTPSTRLYWLIFSLNCVF
Query: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
+GLSFRTTEESLRNAF SFGQL E+NLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
Subjt: RRNFANYVCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVI
Query: FVEVAKSRSELRLGLKENS
FVEVAKS+ ELR GLKENS
Subjt: FVEVAKSRSELRLGLKENS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C0HFE5 Organelle RRM domain-containing protein 1, chloroplastic | 1.2e-12 | 41.57 | Show/hide |
Query: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSELRL
GLSF T+E++LR AF+ FG+L E+ ++MD+++ R +G+AF+ Y TEE A++ M+G+ ++G +I V+VAK+RS RL
Subjt: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSELRL
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| Q6YWP9 Organelle RRM domain-containing protein 1, chloroplastic | 2.0e-12 | 42.05 | Show/hide |
Query: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSELR
GLSF T+E++LR AF+ FG+L E+ ++MDK++ R +G+AF+ Y TEE A++ M+G+ ++G +I V+VAK RS R
Subjt: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSELR
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| Q8L440 Organelle RRM domain-containing protein 1, chloroplastic | 2.0e-12 | 42.86 | Show/hide |
Query: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSR
GLSF T+E++LR AF+ FG+L E+ ++MDK++ R +G+AFL Y TEE + A++ M+GK ++G +I V+VAK++
Subjt: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSR
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| Q9FIU6 Organelle RRM domain-containing protein 2, mitochondrial | 8.1e-14 | 45.65 | Show/hide |
Query: SNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSE
+N +GLS RTT E LR AF FG++ + + +V D+V+ +GF F+RYAT E+S K I GM GKFLDG VIF E A+ R +
Subjt: SNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSE
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| Q9FX45 Organelle RRM domain-containing protein 6, chloroplastic | 3.5e-25 | 64.77 | Show/hide |
Query: AGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSEL
+GLSFRTTE++LR+ F+ FG L +N+VMDKVANRP+GFAFLRY TEEE+ KAI+GMHGKFLDGRVIFVE AK+RS++
Subjt: AGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSEL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.5e-26 | 64.77 | Show/hide |
Query: AGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSEL
+GLSFRTTE++LR+ F+ FG L +N+VMDKVANRP+GFAFLRY TEEE+ KAI+GMHGKFLDGRVIFVE AK+RS++
Subjt: AGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSEL
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| AT2G37510.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.6e-12 | 39.05 | Show/hide |
Query: VCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKS
+C L +GLS TT E L++AF SFGQL + R ++ D+ + R +GF F+ YAT E+++KA M+ KFLDG VIFV+ A+
Subjt: VCGDNLDLLNDSNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKS
Query: RSELR
R R
Subjt: RSELR
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| AT3G20930.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.4e-13 | 42.86 | Show/hide |
Query: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSR
GLSF T+E++LR AF+ FG+L E+ ++MDK++ R +G+AFL Y TEE + A++ M+GK ++G +I V+VAK++
Subjt: GLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSR
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| AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 4.0e-16 | 41.94 | Show/hide |
Query: LSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSELRLGLKEN
LS TT++SLR F FGQ++E R L+ D RP+GF F+ + +E++++KA++ + GK +DGR+IFVEVAK+ E+R G+ N
Subjt: LSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSELRLGLKEN
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| AT5G54580.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 5.7e-15 | 45.65 | Show/hide |
Query: SNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSE
+N +GLS RTT E LR AF FG++ + + +V D+V+ +GF F+RYAT E+S K I GM GKFLDG VIF E A+ R +
Subjt: SNFTRAGLSFRTTEESLRNAFKSFGQLEEGRRLVLVYSELNLVMDKVANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKSRSE
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