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Lsi02G000600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G000600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionOTU domain-containing protein
Genome locationchr02:554785..557191
RNA-Seq ExpressionLsi02G000600
SyntenyLsi02G000600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI18508.3 unnamed protein product, partial [Vitis vinifera]3.1e-0650Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELE
        GS G  NGRLGLL+KP   FTI LVA+ +S+L+N   T S H+ A + A+D GV VL   PL R   R    RSS L+
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELE

KAG0470974.1 hypothetical protein HPP92_015520 [Vanilla planifolia]3.1e-0650.82Show/hide
Query:  WYCTGSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVL
        W   G+GGG +GRL LL++P  G  IGLVA+ T ELE+S   + RH+ A   A   GVTVL
Subjt:  WYCTGSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVL

PON41225.1 hypothetical protein PanWU01x14_291240, partial [Parasponia andersonii]6.1e-0750.77Show/hide
Query:  TGSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGR
        +G GGGD GRLG+L++P DG T+GLVAEL  +LE+       HS     A++F V VL R PL R
Subjt:  TGSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGR

PON85182.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_190260, partial [Trema orientale]6.1e-0747.44Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELE
        G GGGD GRLG+L++P DG  +GLVAEL  +LE+       HS     A+DF V VL R PL R   R +KR   +L+
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELE

VFQ90527.1 unnamed protein product [Cuscuta campestris]3.1e-0646.27Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLL
        G+GGGD+G LGLL++P DG  +GLVAE   ELE+    +  H+ +  TA+D  V V   +PL   LL
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLL

TrEMBL top hitse value%identityAlignment
A0A0D9YKK7 Uncharacterized protein1.5e-0650.88Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVL
        G+GGGD+G LGL ++P DG  +GLVAEL  ELE++S     H+ A   A+D  V VL
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVL

A0A2P5AXG3 Uncharacterized protein (Fragment)3.0e-0750.77Show/hide
Query:  TGSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGR
        +G GGGD GRLG+L++P DG T+GLVAEL  +LE+       HS     A++F V VL R PL R
Subjt:  TGSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGR

A0A2P5EHZ7 Uncharacterized protein (Fragment)3.0e-0747.44Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELE
        G GGGD GRLG+L++P DG  +GLVAEL  +LE+       HS     A+DF V VL R PL R   R +KR   +L+
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELE

A0A484MPU9 Uncharacterized protein1.5e-0646.27Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLL
        G+GGGD+G LGLL++P DG  +GLVAE   ELE+    +  H+ +  TA+D  V V   +PL   LL
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLL

A3ACY4 Uncharacterized protein4.3e-0649.12Show/hide
Query:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVL
        G+GGGD+G LGL ++P DG  +GLVAEL  ELE++      H+ A   A+D  V VL
Subjt:  GSGGGDNGRLGLLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGAGACGCCAGTGTCAGGCGCCGCCCCATGCGGCGGATTTTGGGCGGCGTAGATATTCAAGTGTCCGTCATCATTCACGGTTCCACGTCCACCTCCGGCAGTG
GGTCCCAATGACAGTGGCTTTCCTGGGAGGAGCGTCAATGGAGCAGCCAGATTATTGGATAAACGTAAGCCACCGGAGGGTTGTCCTGATCTGTATAAAGCGGCGTCTTG
GTTGTTGGCAGACTGAAGCCTCCATAAAGAGTCGCCTCCGCCGGCGAATAGTGATGATCTTCTTTTGGTATTGTACCGGTTCCGGTGGCGGCGATAACGGCAGGCTCGGC
TTGCTGAAGAAGCCATTCGATGGTTTCACCATCGGACTTGTGGCCGAGCTCACGAGTGAGCTGGAAAACTCTAGCAGCACAAAGAGCAGGCATTCGGGTGCGACGACCAC
GGCCATCGACTTTGGTGTGACGGTCCTTAGTAGAAGTCCTCTTGGGAGAGGGCTTCTTAGAGATGTCAAGAGGAGATCGTCAGAACTTGAAGAGAAAATAAATAAATTGG
TTCAACCTTTGAAAGAGACCCATTGGTTCAGAGTCCACGTGAAATGGGGCTTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGAGACGCCAGTGTCAGGCGCCGCCCCATGCGGCGGATTTTGGGCGGCGTAGATATTCAAGTGTCCGTCATCATTCACGGTTCCACGTCCACCTCCGGCAGTG
GGTCCCAATGACAGTGGCTTTCCTGGGAGGAGCGTCAATGGAGCAGCCAGATTATTGGATAAACGTAAGCCACCGGAGGGTTGTCCTGATCTGTATAAAGCGGCGTCTTG
GTTGTTGGCAGACTGAAGCCTCCATAAAGAGTCGCCTCCGCCGGCGAATAGTGATGATCTTCTTTTGGTATTGTACCGGTTCCGGTGGCGGCGATAACGGCAGGCTCGGC
TTGCTGAAGAAGCCATTCGATGGTTTCACCATCGGACTTGTGGCCGAGCTCACGAGTGAGCTGGAAAACTCTAGCAGCACAAAGAGCAGGCATTCGGGTGCGACGACCAC
GGCCATCGACTTTGGTGTGACGGTCCTTAGTAGAAGTCCTCTTGGGAGAGGGCTTCTTAGAGATGTCAAGAGGAGATCGTCAGAACTTGAAGAGAAAATAAATAAATTGG
TTCAACCTTTGAAAGAGACCCATTGGTTCAGAGTCCACGTGAAATGGGGCTTTTTATGA
Protein sequenceShow/hide protein sequence
MIRRRQCQAPPHAADFGRRRYSSVRHHSRFHVHLRQWVPMTVAFLGGASMEQPDYWINVSHRRVVLICIKRRLGCWQTEASIKSRLRRRIVMIFFWYCTGSGGGDNGRLG
LLKKPFDGFTIGLVAELTSELENSSSTKSRHSGATTTAIDFGVTVLSRSPLGRGLLRDVKRRSSELEEKINKLVQPLKETHWFRVHVKWGFL