; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G001030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G001030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLYR motif-containing protein 4
Genome locationchr02:843964..844230
RNA-Seq ExpressionLsi02G001030
SyntenyLsi02G001030
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5807263.1 putative complex 1 LYR protein [Helianthus annuus]1.6e-2877.91Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDV
        MATPSRSEIL+LFRSLLR+ARQFPDYNIREYTKRRTIDAFR N++LS+ SSI++A++ G++QL+VAKRQ +VYSLYAPK+KSIMD+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDV

KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3493.1Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD
        MA PSRSEIL+LFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSD SSISS YAGGKAQLEVAKRQ LVYSLYAPKVKSIMDV+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]6.3e-3389.66Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD
        MATPS SEILSLFRSLLRTARQFPDYNIREY KRRTID+FRENQ+LSDASSISS YAGG+AQLEVAKRQ +VYSLYAPKVKSIMDV+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]1.3e-3393.18Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL
        MATPSRSEILSLFRSLLRTARQF DYNIREYTKRR IDAFREN+SLSD SSISSAYAGGKAQLEVAKRQ LVYSLYAPKVKSIMDV L
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]2.7e-3696.59Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL
        MATPSRSE+LSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQ LVYSLYAPKVKSIMDV+L
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein3.1e-3389.66Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD
        MATPS SEILSLFRSLLRTARQFPDYNIREY KRRTID+FRENQ+LSDASSISS YAGG+AQLEVAKRQ +VYSLYAPKVKSIMDV+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD

A0A1S3XFP4 LYR motif-containing protein 41.1e-2772.41Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD
        MA+PSR E+L+LFRSLL+TARQFPDYNIREYTKRRTID FR+N+ LSD S +++A++ G+AQLEVAKRQ +VYSLYAPKVKS+M+++
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVD

A0A251UU63 Putative complex 1 LYR protein7.8e-2977.91Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDV
        MATPSRSEIL+LFRSLLR+ARQFPDYNIREYTKRRTIDAFR N++LS+ SSI++A++ G++QL+VAKRQ +VYSLYAPK+KSIMD+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDV

A0A2J6KBZ0 Uncharacterized protein8.6e-2876.19Show/hide
Query:  TPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDV
        TPSR+EI++LFRSLLR+ARQFPDYNIREYTKRRTIDAFR+N++LS+ SSI++A+  GK+QL+VAKRQ +VYSLYAPK+KSIMD+
Subjt:  TPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDV

A0A6J1C8A4 LYR motif-containing protein 46.2e-3493.18Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL
        MATPSRSEILSLFRSLLRTARQF DYNIREYTKRR IDAFREN+SLSD SSISSAYAGGKAQLEVAKRQ LVYSLYAPKVKSIMDV L
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 44.1e-1145.45Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA
        MA  SR+++L L+R+LLR +++F  YN R Y  RR  DAFREN++++D+  I       KA LEV +RQG +  +YA
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA

B5XD90 LYR motif-containing protein 4B2.1e-0735.44Show/hide
Query:  SEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMD
        +++LSL+R L++ + +FP YN R Y  RR  DAFR N+S+ D   +      G+  L++ +RQ  +  +Y P  K+I++
Subjt:  SEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMD

Q0VCG0 LYR motif-containing protein 42.8e-0737.66Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA
        MA  SR+++L L+R++LR +++F  YN R Y  RR  DAFREN+++ D   I +     K  L + +RQ  +  +Y+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA

Q8K215 LYR motif-containing protein 44.3e-0838.96Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA
        MA  SR+++L L+R+++R ++ F  YN R Y  RR  DAFREN+++ D   I +     K  LE+ +RQ  +  LY+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA

Q9HD34 LYR motif-containing protein 42.5e-0841.56Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA
        MA  SR+++LSL+R++LR +++F  YN R Y  RR  DAFREN+++ D   I +     K  L V +RQ  +  LY+
Subjt:  MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein5.9e-2160.71Show/hide
Query:  SRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL
        S SE+LSL R+LLR  RQFPDYNIREY+KRRT+D FR N++L+D S ++ AYA  K QL VA+R   VY  Y PK K+IM+V L
Subjt:  SRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCATCTAGGTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGAACGGCGCGTCAATTTCCCGATTACAACATCAGAGAATACACCAAACGCCGCACCAT
TGATGCCTTCCGAGAAAATCAGAGCCTCTCCGACGCTTCATCCATCTCCTCCGCCTACGCCGGCGGAAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGGCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCGACCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCCATCTAGGTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGAACGGCGCGTCAATTTCCCGATTACAACATCAGAGAATACACCAAACGCCGCACCAT
TGATGCCTTCCGAGAAAATCAGAGCCTCTCCGACGCTTCATCCATCTCCTCCGCCTACGCCGGCGGAAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGGCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCGACCTTTGA
Protein sequenceShow/hide protein sequence
MATPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGKAQLEVAKRQGLVYSLYAPKVKSIMDVDL