CuGenDBv2

Gene ID	Lsi02G001230
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr02:1015018..1015398
RNA-Seq Expression	Lsi02G001230
Synteny	Lsi02G001230
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022923781.1 uncharacterized protein LOC111431390, partial [Cucurbita moschata]

3.8e-63

94.44

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS  FQTLKRYIKKPWEITGPCADPEY+LAVPSA+EYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVE+MMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEED+NARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

XP_023001049.1 uncharacterized protein LOC111495303 [Cucurbita maxima]

1.4e-62

93.65

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS  FQTLKRYIKKPWEITGPCADPEY+LAVPSA+EYRVFCPA+TKEKAIVPTSNPETVFDIKYY+RDQRRNRPPIRRTILKKPDVE+MMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

XP_023520186.1 uncharacterized protein LOC111783486 [Cucurbita pepo subsp. pepo]

4.2e-62

92.86

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS  FQTLKRYIKKPWEITGPCADPEY+LAVPSA+EYR+ CPA+TKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVE+MMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

XP_023541320.1 uncharacterized protein LOC111801530, partial [Cucurbita pepo subsp. pepo]

1.9e-62

93.65

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS LFQT+KRYIKKPWEITGPCADPEYR AVPSALEYRVFCPATTK+K IVPTSNPETVFDIKYY+RDQRRNRPPIRRTILKKPD+EQMMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

XP_038895860.1 uncharacterized protein LOC120084028 [Benincasa hispida]

9.9e-64

96.03

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS LFQTLKRY KKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVE+MMK+T+FD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BI32 Uncharacterized protein

8.5e-61

91.27

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKA+S L QTL+RYIKKPWEITGPCADPEYR AVPSALEYRV CPAT KEKAI+PTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVE+MMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEED+NARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

A0A6J1E7N6 uncharacterized protein LOC111431390

1.8e-63

94.44

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS  FQTLKRYIKKPWEITGPCADPEY+LAVPSA+EYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVE+MMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEED+NARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

A0A6J1GSY9 uncharacterized protein LOC111456682

1.3e-61

92.06

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS LFQTLKR+IKKPWEITGPCADPEYR AVPSALEYRVFCPATTK+K IVPTSNP+TVFDIKYY+RDQRRNRPPIRR ILKKPD+EQMMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

A0A6J1K4A0 uncharacterized protein LOC111489956

6.5e-61

92.06

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS LFQTLKRYIKKPWEITGPCAD EYR AVPSALEYR+FCPATTK+K IVPTSNPETVFDIKYY+RDQRRNRPPIR TILKKPD+EQMMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

A0A6J1KK07 uncharacterized protein LOC111495303

6.9e-63

93.65

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD
        MAKASS  FQTLKRYIKKPWEITGPCADPEY+LAVPSA+EYRVFCPA+TKEKAIVPTSNPETVFDIKYY+RDQRRNRPPIRRTILKKPDVE+MMK+TKFD
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQK
        PADFPKVYLTAAIEEDINARGGGYQK
Subjt:  PADFPKVYLTAAIEEDINARGGGYQK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G08060.1 unknown protein

1.6e-43

64.57

Show/hide

Query:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTK-F
        ++ A+S L Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  E+AIVP+S+PETV++I Y+ RDQRRNRPPIRR +L K +V QMM + K F
Subjt:  MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTK-F

Query:  DPADFPKVYLTAAIEEDINARGGGYQK
        D +DFPKVYLT  +EED++ RGGGY+K
Subjt:  DPADFPKVYLTAAIEEDINARGGGYQK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAAAGCTTCTTCTCCCTTGTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAGATTAGCCGTCCCGAG
CGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCTCCAATCCCGAAACCGTCTTCGACATTAAGTATTACACCCGCGACCAGC
GTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGCAGATGATGAAGCAGACGAAGTTCGACCCTGCTGATTTCCCCAAAGTTTATCTCACT
GCCGCGATCGAGGAGGATATAAATGCCCGTGGAGGTGGTTATCAGAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAKASSPLFQTLKRYIKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEQMMKQTKFDPADFPKVYLT
AAIEEDINARGGGYQK

Lsi02G001230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome