; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G001330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G001330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA polymerase alpha subunit B
Genome locationchr02:1086076..1091823
RNA-Seq ExpressionLsi02G001330
SyntenyLsi02G001330
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0005658 - alpha DNA polymerase:primase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR007185 - DNA polymerase alpha/delta/epsilon, subunit B
IPR013627 - DNA polymerase alpha, subunit B, N-terminal
IPR016722 - DNA polymerase alpha, subunit B
IPR043034 - DNA polymerase alpha, subunit B, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652527.1 hypothetical protein Csa_013070, partial [Cucumis sativus]7.7e-30586.5Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        MEEEIGEEFK SGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++EQ+DGFLQHLQNEQKE VIKGEPDLHVYSSKDVDVILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        +EDLN DILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKH TPFGQRTEKFVVRFNIN+MPD V A K DN ENDED IIKKVRPLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQKS+FAVGMIYCDGEGHLNDKS LLQSSIAHSGGQRVRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIF FEVLRRVQDYAEHMGPDARVLLMPSTRDA+HDF FPQPAFDIPSDL+LQISS PNPCILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG TNDRLSTLA+               EGVPLDFSLAP+ALDISVIPDILILPSDMKHFVKVISLGEG S EEQARC+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVELNYFGRPDQINA VVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

XP_004137446.1 DNA polymerase alpha subunit B [Cucumis sativus]7.7e-30586.5Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        MEEEIGEEFK SGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++EQ+DGFLQHLQNEQKE VIKGEPDLHVYSSKDVDVILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        +EDLN DILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKH TPFGQRTEKFVVRFNIN+MPD V A K DN ENDED IIKKVRPLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQKS+FAVGMIYCDGEGHLNDKS LLQSSIAHSGGQRVRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIF FEVLRRVQDYAEHMGPDARVLLMPSTRDA+HDF FPQPAFDIPSDL+LQISS PNPCILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG TNDRLSTLA+               EGVPLDFSLAP+ALDISVIPDILILPSDMKHFVKVISLGEG S EEQARC+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVELNYFGRPDQINA VVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

XP_008452343.1 PREDICTED: DNA polymerase alpha subunit B [Cucumis melo]3.4e-30586.5Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        M EEIGEEFK SGFTFDEEEEILK+CVTFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++EQMDGFLQHLQNEQKE VIKGEPDLHVYSSKDVDVILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        +EDLN DILKTPNGKSQSLHKERLDLTPYTN GLFSSGKPSKH TPFGQRTEKFVVRFNINSMPD V AEKEDN ENDEDAIIKKVRPLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQ+SMFAVGMIYCDGEGHLNDKS LLQSSIAHSGGQRVRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASK VDSFPLSATIDPILPPAKKIALNHD+QPINQSSTPSELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIF FEVLRRVQ+YAEHMGPDARVLLMPSTRDA+HDFVFPQP FDIPSDL+LQISS PNPCILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG TNDRLSTLA+               EGVPLDFSLAP+ALDISVIPDILILPSDMKHFVKVISLGEG S EEQARC+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVELNYFGRPDQINASVVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

XP_022944938.1 DNA polymerase alpha subunit B [Cucurbita moschata]9.1e-29081.83Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        M++EIGEEFK SGFTFDEEEEIL KCVTFCVNY+LKPSDIVSSWEVYYLNRQLDGS+VQI QMDGFLQHLQNEQKEA+IK EPDLHVYSSKDVD+ILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        DED   DILKTPNGKSQ LHK+R DLTPYTNEGLFSSGKPSKH+TPFGQRTEKF VRF+IN++PDK  AE EDNCENDEDAIIKKV PLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYD+ EDRFNAL+NRI++HA AL ASGLYEE VDPTVASQKSMFAVGMI CDG+GHLNDKST+LQSS+ HSGGQ VRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKI L+HDIQPINQ ST SELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDY EHMGPDARVLLMPS RDA+HDFVFPQPAFDIPSDLRLQISSLPNP ILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG  NDRLSTLA+               EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEG + EE+A C+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVEL YFG PD+INA+VVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

XP_038886670.1 LOW QUALITY PROTEIN: DNA polymerase alpha subunit B [Benincasa hispida]3.6e-29484.27Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVI-LND
        MEE IGEE K SGFTFDEEEEILKKCVTFCVNYNLKPSDIV SWEVYYLNRQL GSVVQIE MDGFLQHLQNEQK+AVIKG+PDLHVYSSKDV +  LND
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVI-LND

Query:  EDEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGS
        EDEDLNGDILKTPNGKSQSLHKERLD TPYTNEGLFS GKPS+H+TPFGQRTEKFVVRFNINS PDKV AEKEDNCENDEDAIIKKV+PLQGCLLT+HGS
Subjt:  EDEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGS

Query:  GFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFP
        GFGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQKSMFAVGMIY DGEGHLNDKSTLLQSS+AHSGG RVRLELQNLSQFSIFP
Subjt:  GFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFP

Query:  GQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPF
        GQVVGIEGHNPSGHCLIASKL   F       PILPPAKKIALNHDIQPINQSSTPSELSM                                   LGPF
Subjt:  GQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPF

Query:  IDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLS
        +DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHM PDARV+LMPS RDA+HDFVFPQPAFDIPSDLRLQISSLPNPCILEANQ+KIAC  MDILRHL 
Subjt:  IDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLS

Query:  GEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEG
        GEELSRNLTKG TNDRLSTLA+               EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEG S EEQARCICVNPGRLAKGEG
Subjt:  GEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEG

Query:  GGTFVELNYFGRPDQINASVVSI
        GGTFVELNYFGRPD+INASVVSI
Subjt:  GGTFVELNYFGRPDQINASVVSI

TrEMBL top hitse value%identityAlignment
A0A0A0LQA4 DNA polymerase alpha subunit B3.7e-30586.5Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        MEEEIGEEFK SGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++EQ+DGFLQHLQNEQKE VIKGEPDLHVYSSKDVDVILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        +EDLN DILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKH TPFGQRTEKFVVRFNIN+MPD V A K DN ENDED IIKKVRPLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQKS+FAVGMIYCDGEGHLNDKS LLQSSIAHSGGQRVRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIF FEVLRRVQDYAEHMGPDARVLLMPSTRDA+HDF FPQPAFDIPSDL+LQISS PNPCILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG TNDRLSTLA+               EGVPLDFSLAP+ALDISVIPDILILPSDMKHFVKVISLGEG S EEQARC+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVELNYFGRPDQINA VVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

A0A1S3BUF0 DNA polymerase alpha subunit B1.7e-30586.5Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        M EEIGEEFK SGFTFDEEEEILK+CVTFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++EQMDGFLQHLQNEQKE VIKGEPDLHVYSSKDVDVILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        +EDLN DILKTPNGKSQSLHKERLDLTPYTN GLFSSGKPSKH TPFGQRTEKFVVRFNINSMPD V AEKEDN ENDEDAIIKKVRPLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQ+SMFAVGMIYCDGEGHLNDKS LLQSSIAHSGGQRVRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASK VDSFPLSATIDPILPPAKKIALNHD+QPINQSSTPSELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIF FEVLRRVQ+YAEHMGPDARVLLMPSTRDA+HDFVFPQP FDIPSDL+LQISS PNPCILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG TNDRLSTLA+               EGVPLDFSLAP+ALDISVIPDILILPSDMKHFVKVISLGEG S EEQARC+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVELNYFGRPDQINASVVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

A0A5D3BJQ2 DNA polymerase alpha subunit B2.9e-28981.03Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVD------
        M EEIGEEFK SGFTFDEEEEILK+CVTFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++EQMDGFLQHLQNEQKE VIKGEPDLHVYSSKDVD      
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVD------

Query:  VILNDEDEDLNGDILKTPN---------------GKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDE
        V+L         + L+  N                  +SLHKERLDLTPYTN GLFSSGKPSKH TPFGQRTEKFVVRFNINSMPD V AEKEDN ENDE
Subjt:  VILNDEDEDLNGDILKTPN---------------GKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDE

Query:  DAIIKKVRPLQGCLLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAH
        DAIIKKVRPLQGC LTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHA ALAASGLYEEAVDPTVASQ+SMFAVGMIYCDGEGHLNDKS LLQSSIAH
Subjt:  DAIIKKVRPLQGCLLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAH

Query:  SGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-------------------
        SGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASK VDSFPLSATIDPILPPAKKIALNHD+QPINQSSTPSELSM                   
Subjt:  SGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-------------------

Query:  ----------------LGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCI
                        LGPF+DSEHSDIKRGTVEMSFEEIF FEVLRRVQ+YAEHMGPDARVLLMPSTRDA+HDFVFPQP FDIPSDL+LQISS PNPCI
Subjt:  ----------------LGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCI

Query:  LEANQSKIACCTMDILRHLSGEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSS
        LEANQ+KIACCTMDILRHLSGEELSRNLTKG TNDRLSTLA+               EGVPLDFSLAP+ALDISVIPDILILPSDMKHFVKVISLGEG S
Subjt:  LEANQSKIACCTMDILRHLSGEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSS

Query:  GEEQARCICVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI
         EEQARC+CVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI
Subjt:  GEEQARCICVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI

A0A6J1FZE8 DNA polymerase alpha subunit B4.4e-29081.83Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        M++EIGEEFK SGFTFDEEEEIL KCVTFCVNY+LKPSDIVSSWEVYYLNRQLDGS+VQI QMDGFLQHLQNEQKEA+IK EPDLHVYSSKDVD+ILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        DED   DILKTPNGKSQ LHK+R DLTPYTNEGLFSSGKPSKH+TPFGQRTEKF VRF+IN++PDK  AE EDNCENDEDAIIKKV PLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYD+ EDRFNAL+NRI++HA AL ASGLYEE VDPTVASQKSMFAVGMI CDG+GHLNDKST+LQSS+ HSGGQ VRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKI L+HDIQPINQ ST SELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDY EHMGPDARVLLMPS RDA+HDFVFPQPAFDIPSDLRLQISSLPNP ILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG  NDRLSTLA+               EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEG + EE+A C+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVEL YFG PD+INA+VVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

A0A6J1HSI8 DNA polymerase alpha subunit B4.1e-28881.35Show/hide
Query:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE
        M++EIGEEFK SGFTFDEEEEILKKCVTFC+NY+LKPSDIVSSWEVYYLNRQLDGS+VQI QMDGFLQHLQNEQKEA+IK EPDLHVYSSKDVD+ILNDE
Subjt:  MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
        DED   DILKTPNGKSQ LHK+R DLTPYTNEGLFSSGKPSKH+TPFGQRTEKF VRF+IN++PDK  AE EDNCENDEDAIIKKV PLQGC LTVHGSG
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
        FGLEPNCRFMYD+ EDRFNAL+NRI++HA AL ASGLYEE VDPTVASQKS+FAVGMI CDG+GHLNDKST+LQSS+ HSGGQRVRLELQNLSQFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI
        QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIAL+HDIQPI  SST SELSM                                   LGPF+
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM-----------------------------------LGPFI

Query:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG
        DSEHSDIKRGTVEMSFEEIF FEVLRRVQDY EHMGPDARVLLMPS RDA+HDFVFPQPAFDIPSDLRLQ+SSLPNP ILEANQ+KIACCTMDILRHLSG
Subjt:  DSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSG

Query:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
        EELSRNLTKG  NDRLSTLA+               EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEG + EE+A C+CVNPGRLAKGEGG
Subjt:  EELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG

Query:  GTFVELNYFGRPDQINASVVSI
        GTFVEL YFG PD++NA+VVSI
Subjt:  GTFVELNYFGRPDQINASVVSI

SwissProt top hitse value%identityAlignment
O74946 DNA polymerase alpha subunit B2.2e-2830.64Show/hide
Query:  NCRFMYDKDEDRFNALDNRIMRHAYALAASGLY----EEAVDPTVASQKSMFAVGMIYCDGE---GHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIF
        N R MY K  D    LD+RI    ++      Y    E+  +P+  +Q+ +  VG I  +     G LN  S LL+SS     G RVRL++ +L  +SIF
Subjt:  NCRFMYDKDEDRFNALDNRIMRHAYALAASGLY----EEAVDPTVASQKSMFAVGMIYCDGE---GHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIF

Query:  PGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPIN-------------------------QSSTPSELSML-GPFIDSEHSDI
        PGQ+V ++G NPSG+  IA +++   PL          A  +A N + QPI+                          +  P +L +L GPF+D  H  I
Subjt:  PGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPIN-------------------------QSSTPSELSML-GPFIDSEHSDI

Query:  K----RGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDF-VFPQPAFD-IPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSGE
        +     GT   S EE+F      RV      +      +L+P   DA  D   +PQ AF+ +   L       PNPC+   N       T DIL H S E
Subjt:  K----RGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDF-VFPQPAFD-IPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSGE

Query:  ELSRNLTKGATNDRLSTLATE---------GVPLDFSLAPKALDI---------SVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGE
        EL R  + G    RL +             G  L+    P  LDI         + +PDILILPSD+++FVK +              + +NPG+  KG 
Subjt:  ELSRNLTKGATNDRLSTLATE---------GVPLDFSLAPKALDI---------SVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGE

Query:  GGGTFVEL
          GTF +L
Subjt:  GGGTFVEL

O89043 DNA polymerase alpha subunit B1.4e-3825.45Show/hide
Query:  EEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQ-KEAVIKGEPDLHVYSSKDV----DVIL
        +++ EE +   F  D E+ +L+K    C  Y      +VS  E+         S +  E +  F   + N++  +A      D     ++D+    ++I 
Subjt:  EEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQ-KEAVIKGEPDLHVYSSKDV----DVIL

Query:  NDEDEDLNGDILKTPNGKSQSLHKERLDLTPYT--NEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCE-----NDEDAIIKKVRPLQ
         +E+E+       TP   S+  HK R+  TP T   +   S+  P + ++P           F+ ++ P +  + + +  E          +    R   
Subjt:  NDEDEDLNGDILKTPNGKSQSLHKERLDLTPYT--NEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCE-----NDEDAIIKKVRPLQ

Query:  GCL-LTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLEL
        G + L V G    L  + + M+ +  D    L  +I      L      E      V +Q+ +  +G I CD  G LN KS +L+    HS G ++ +++
Subjt:  GCL-LTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLEL

Query:  QNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPL----------------------------SATIDPILPPAKKIALNHDIQPINQSSTPSELSML
          L  +S+FPGQVV +EG N +G  L A+KL +  PL                            S T DP+L     I  NHD         P    + 
Subjt:  QNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPL----------------------------SATIDPILPPAKKIALNHDIQPINQSSTPSELSML

Query:  GPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIACCTMD
        GPF+D++H  ++   +   FE+IF  + LR V +     G  + ++ +PS RD HH+ V+PQP F   ++P + + ++  +  PC L  N       + D
Subjt:  GPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIACCTMD

Query:  ILRHLSGEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGR
        +L H+  EE+    +   T+DR S +                 E + +D+        + V PD+ I+PS++++FVK I             C+C+NPGR
Subjt:  ILRHLSGEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGR

Query:  LAKGEGGGTFVEL
        L KG+ GGTF  L
Subjt:  LAKGEGGGTFVEL

P33611 DNA polymerase alpha subunit B6.8e-3829.67Show/hide
Query:  EAVDP-TVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPL------------
        EA  P  V +Q+ +  +G I CD  G LN KS +L+    HS G ++ ++L  L ++S+FPGQVV +EG N +G  L A+KL +  PL            
Subjt:  EAVDP-TVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPL------------

Query:  ----------------SATIDPILPPAKKIALNHDIQPINQSSTPSELSMLGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMP
                        S T DP+L          D+  I     P    + GPF+D++H  ++   +   FE++F  + LR V +     G  + ++ +P
Subjt:  ----------------SATIDPILPPAKKIALNHDIQPINQSSTPSELSMLGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMP

Query:  STRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSGEELSRNLTKGATNDRLSTLAT---------------EGVPLD
        S RD HH+ V+PQP F   ++  + + ++  +  PC L  N       + D+L H+  EE+    +   T+DR S +                 E + +D
Subjt:  STRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSGEELSRNLTKGATNDRLSTLAT---------------EGVPLD

Query:  FSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGGGTFVEL
        +        + V PD+ I+PS++++FVK I             C+CVNPGRL KG+ GGTF  L
Subjt:  FSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGGGTFVEL

Q14181 DNA polymerase alpha subunit B6.0e-4225.84Show/hide
Query:  EEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQM--DGFLQHLQNEQKEAVIKGEPDLHVYSSKDV----DVI
        +++ EE +   F  D EE +++K V  CV Y      +V     +  +    G   +I       FL    ++ + +  K   D     ++D+    ++I
Subjt:  EEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQM--DGFLQHLQNEQKEAVIKGEPDLHVYSSKDV----DVI

Query:  LNDEDEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQG-----
          +E+E++  +   TP+  SQ       + TP T   + S+  P + ++P              +S        ++ N  ++   ++      QG     
Subjt:  LNDEDEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQG-----

Query:  ------CLLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRV
                L V G    L  + + M+ K  D    L  +I      L      E        +Q+ +  +G I CD  G LN+KS +L+    HS G ++
Subjt:  ------CLLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRV

Query:  RLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPL----------------------------SATIDPILPPAKKIALNHDIQPINQSSTPSE
         ++L  L ++S+FPGQVV +EG N +G  L+A+KL +  PL                            S T DP+L       +NHD         P  
Subjt:  RLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPL----------------------------SATIDPILPPAKKIALNHDIQPINQSSTPSE

Query:  LSMLGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIAC
          + GPF+D++H  ++   +   FE+IF  + LR + +     G  + ++ +PS RD HH+ V+PQP F   D+  + + Q+  +  PC L  N      
Subjt:  LSMLGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIAC

Query:  CTMDILRHLSGEELSRNLTKGATNDRLSTL---------------ATEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICV
         + D+L HL  EE+S   +   T+DR S +                 E + +D+        + V PD+LI+PS++++FVK + LG          C+CV
Subjt:  CTMDILRHLSGEELSRNLTKGATNDRLSTL---------------ATEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICV

Query:  NPGRLAKGEGGGTFVELNYFGRP
        NPGRL KG+ GGTF  L Y  RP
Subjt:  NPGRLAKGEGGGTFVELNYFGRP

Q58D13 DNA polymerase alpha subunit B1.3e-3324.12Show/hide
Query:  FTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKG---EPDLHVYSSKDV----DVILNDEDEDLNG
        F  + EE +++K V  C+ Y      + S    +  + + D     +E ++ F     +++      G   +  L    ++D+    ++I  +E+E+   
Subjt:  FTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKG---EPDLHVYSSKDV----DVILNDEDEDLNG

Query:  DILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKH-------MTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGS
        +   TP+  SQ    +R   TP T     S    S H        +P     +K+  R N   +     + +  +      A      PL    L V G 
Subjt:  DILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKH-------MTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGS

Query:  GFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFP
           L  + ++M+ K  D    L  +I      L      E      V +Q+ +  +G I CD  G LN KS +L+  + HS G ++ ++L  L ++S+FP
Subjt:  GFGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFP

Query:  GQVVGIEGHNPSGHCLIASKLVDSFPL----------------------------SATIDPILPPAKKIALNHDIQPINQSSTPSELSMLGPFIDSEHSD
        GQVV +EG N +G  L+A++L +  PL                            S T DP+L          D+  I     P    + GPF+D++H  
Subjt:  GQVVGIEGHNPSGHCLIASKLVDSFPL----------------------------SATIDPILPPAKKIALNHDIQPINQSSTPSELSMLGPFIDSEHSD

Query:  IKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSGEEL
        ++   +  SFE++F  + LR + +     G  + ++++PS RD HH+ V+PQP F   D+  + + ++  +  PC L  N       + D+L H+  EE+
Subjt:  IKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAF---DIPSDLRLQISSLPNPCILEANQSKIACCTMDILRHLSGEEL

Query:  SRNLTKGATNDRLSTL---------------ATEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKV
        S   +   T+DR S +                 E + +D+        + V PD+ I PS++++FVKV
Subjt:  SRNLTKGATNDRLSTL---------------ATEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKV

Arabidopsis top hitse value%identityAlignment
AT1G67630.1 DNA polymerase alpha 25.7e-18153.85Show/hide
Query:  EEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIK-GEPDLHVYSSKDVDVILNDE
        +EEI  EFK SGF   EE+EILK+CVT C+NY+LKPSD+VSSWE+Y+LNRQL    V+ + MDGF+ HLQNEQKE++++  E  LH+YS++DVD++L+  
Subjt:  EEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIK-GEPDLHVYSSKDVDVILNDE

Query:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG
         ED   +I+ TP  KSQ LH +  D    + +  +S+GK   H+TPFG R EKFVV+FN+ ++         ++ EN ED IIK+V+  Q C L V+GS 
Subjt:  DEDLNGDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSG

Query:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG
         G EP CRFMYD+ EDRF+AL+ RI+RHA A AASGLYEE VDP VASQ+S+FAVGMI CDGEGHLNDKS LLQSS   + GQRV ++L+ L QFSIFPG
Subjt:  FGLEPNCRFMYDKDEDRFNALDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPG

Query:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDI------------------------------QPINQ------SSTPSELSMLGPF
        QVVGIEG NPSGH L ASKL+DS PL+ T+D  LPPAK+  L+ ++                              +P+N+         P  L +LGPF
Subjt:  QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDI------------------------------QPINQ------SSTPSELSMLGPF

Query:  IDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIP-SDLRLQISSLPNPCILEANQSKIACCTMDILRHL
        +DSEH +IK+G V+ +F EIF  EVLR++QDY E MG + RV+L+PS RDA+HDF+FPQP FDI   DL  Q++SL NP   EANQ K++CCT+D+L+ L
Subjt:  IDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIP-SDLRLQISSLPNPCILEANQSKIACCTMDILRHL

Query:  SGEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGE
        SGEE+S+N   G   DR+S LA+               E +P D SLAPKAL IS IPDIL+LPSDM++FVK++SLGE    E+ A+C+CVNPGRLAKGE
Subjt:  SGEELSRNLTKGATNDRLSTLAT---------------EGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGE

Query:  GGGTFVELNYFGRPDQINASVVSI
        G GTFVEL Y G P+ ++AS++SI
Subjt:  GGGTFVELNYFGRPDQINASVVSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGATCGGAGAAGAATTCAAGTGGAGTGGTTTCACGTTTGATGAAGAGGAAGAGATTCTCAAGAAATGTGTTACGTTCTGTGTTAATTACAATCTAAAGCC
TTCCGATATTGTTTCTAGCTGGGAGGTCTACTATCTCAACAGGCAATTAGATGGGTCAGTGGTGCAAATTGAACAGATGGATGGGTTCTTACAACATTTACAGAATGAGC
AAAAAGAAGCAGTCATTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTTGACGTGATTTTGAATGATGAGGATGAAGATCTAAATGGAGACATTCTTAAG
ACCCCAAATGGGAAATCTCAGAGCCTCCACAAAGAGCGATTGGATTTGACACCTTACACGAATGAAGGCTTGTTCTCATCGGGAAAGCCTTCAAAGCATATGACACCCTT
TGGTCAAAGAACAGAAAAGTTTGTTGTGAGGTTCAACATTAATAGCATGCCTGATAAGGTGGCTGCTGAAAAGGAAGATAATTGCGAGAATGATGAAGATGCAATCATCA
AGAAGGTTCGACCCCTGCAAGGATGCTTATTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAAGGATGAAGATAGGTTTAATGCT
CTTGATAACCGAATCATGAGGCATGCTTATGCTCTTGCTGCATCTGGGCTCTACGAAGAAGCAGTGGACCCTACAGTTGCTTCACAGAAAAGCATGTTTGCAGTGGGCAT
GATTTATTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAAAGCAGTATCGCACATTCAGGGGGGCAGCGAGTTCGTCTAGAGTTACAAAACTTAAGCC
AATTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCGTCAAAACTTGTAGATTCTTTTCCTCTGTCCGCCACTATA
GACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGATATCCAACCAATTAATCAATCTTCTACACCGTCAGAATTATCGATGCTTGGACCATTTATTGATTC
TGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTTTAAGAAGGGTACAAGATTATGCAGAACACATGGGTCCTGATG
CACGTGTACTGTTGATGCCATCTACAAGGGATGCTCATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCTCCCA
AACCCATGCATTTTGGAAGCAAATCAGTCAAAGATAGCCTGCTGCACCATGGATATTCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACTAAGGGAGCAAC
CAACGACCGCCTGAGCACACTTGCAACCGAAGGAGTTCCACTGGACTTTTCACTTGCTCCAAAAGCTCTCGACATCTCTGTAATACCTGATATTCTCATTCTTCCATCCG
ACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAAGTTCAGGGGAAGAGCAAGCGAGATGCATATGTGTGAATCCTGGAAGATTGGCCAAGGGAGAAGGAGGA
GGTACTTTTGTAGAGCTTAATTACTTCGGTAGGCCTGACCAGATAAATGCTTCAGTTGTCAGCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAGATCGGAGAAGAATTCAAGTGGAGTGGTTTCACGTTTGATGAAGAGGAAGAGATTCTCAAGAAATGTGTTACGTTCTGTGTTAATTACAATCTAAAGCC
TTCCGATATTGTTTCTAGCTGGGAGGTCTACTATCTCAACAGGCAATTAGATGGGTCAGTGGTGCAAATTGAACAGATGGATGGGTTCTTACAACATTTACAGAATGAGC
AAAAAGAAGCAGTCATTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTTGACGTGATTTTGAATGATGAGGATGAAGATCTAAATGGAGACATTCTTAAG
ACCCCAAATGGGAAATCTCAGAGCCTCCACAAAGAGCGATTGGATTTGACACCTTACACGAATGAAGGCTTGTTCTCATCGGGAAAGCCTTCAAAGCATATGACACCCTT
TGGTCAAAGAACAGAAAAGTTTGTTGTGAGGTTCAACATTAATAGCATGCCTGATAAGGTGGCTGCTGAAAAGGAAGATAATTGCGAGAATGATGAAGATGCAATCATCA
AGAAGGTTCGACCCCTGCAAGGATGCTTATTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAAGGATGAAGATAGGTTTAATGCT
CTTGATAACCGAATCATGAGGCATGCTTATGCTCTTGCTGCATCTGGGCTCTACGAAGAAGCAGTGGACCCTACAGTTGCTTCACAGAAAAGCATGTTTGCAGTGGGCAT
GATTTATTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAAAGCAGTATCGCACATTCAGGGGGGCAGCGAGTTCGTCTAGAGTTACAAAACTTAAGCC
AATTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCGTCAAAACTTGTAGATTCTTTTCCTCTGTCCGCCACTATA
GACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGATATCCAACCAATTAATCAATCTTCTACACCGTCAGAATTATCGATGCTTGGACCATTTATTGATTC
TGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTTTAAGAAGGGTACAAGATTATGCAGAACACATGGGTCCTGATG
CACGTGTACTGTTGATGCCATCTACAAGGGATGCTCATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCTCCCA
AACCCATGCATTTTGGAAGCAAATCAGTCAAAGATAGCCTGCTGCACCATGGATATTCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACTAAGGGAGCAAC
CAACGACCGCCTGAGCACACTTGCAACCGAAGGAGTTCCACTGGACTTTTCACTTGCTCCAAAAGCTCTCGACATCTCTGTAATACCTGATATTCTCATTCTTCCATCCG
ACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAAGTTCAGGGGAAGAGCAAGCGAGATGCATATGTGTGAATCCTGGAAGATTGGCCAAGGGAGAAGGAGGA
GGTACTTTTGTAGAGCTTAATTACTTCGGTAGGCCTGACCAGATAAATGCTTCAGTTGTCAGCATATGAACAGTGGACTTGACTTCTAGCCCTCTCTGTTTGACTCACAC
ATTGGACCTGCCAAATCTTGTTCGACTTCAGTTTCAACATGGCGCTTAAGTTCCAGGTACAAGAGTGGTTGTAGTCTTATTCATTAAATTATCGATTAGATATGAGATTT
GTAATAAATTACTACAGAGTGTATATTATTGTCCTTGTGTAAGAGGAGAGCAGAGCGGTTAGGAAAGAATTCACCGTGCATAGTTCAACTGGTCAATGTATTATTTACCA
GTAGCTTTTTTAAAGATAGTAAGTTTGAGTCTTTCACCATTCATGTTGGAATTGTTATACTAAAAAACAGAAAAAAGAAATAACTAATTTGGTCATGAGGATTTGCATA
Protein sequenceShow/hide protein sequence
MEEEIGEEFKWSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVDVILNDEDEDLNGDILK
TPNGKSQSLHKERLDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFVVRFNINSMPDKVAAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSGFGLEPNCRFMYDKDEDRFNA
LDNRIMRHAYALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSTLLQSSIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATI
DPILPPAKKIALNHDIQPINQSSTPSELSMLGPFIDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLP
NPCILEANQSKIACCTMDILRHLSGEELSRNLTKGATNDRLSTLATEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGSSGEEQARCICVNPGRLAKGEGG
GTFVELNYFGRPDQINASVVSI