; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G001430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G001430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDof zinc finger protein
Genome locationchr02:1170925..1171428
RNA-Seq ExpressionLsi02G001430
SyntenyLsi02G001430
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584390.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]7.5e-4364.63Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP---AIVRDSPSSNSAVLGSDLEMFSTPL
        MD Q+I+SK   KCPRC SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+LRNVP+GGG+R++K +SK KP    IVRDSPSS S    SDLE+  +PL
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP---AIVRDSPSSNSAVLGSDLEMFSTPL

Query:  KLNQAGDWCGWIENRRELESGIVAAAGDPTAEGFGWLDHLATSGGSE
         LNQAGDW GWIE  RE E G          EGFG LDHL TS  +E
Subjt:  KLNQAGDWCGWIENRRELESGIVAAAGDPTAEGFGWLDHLATSGGSE

XP_004137607.1 dof zinc finger protein DOF1.7 [Cucumis sativus]3.0e-3957.74Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKL-
        MD Q+  ++ + +CPRC+SLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRN+P+GGG+R+SKKNSK+K A   DS  +++    SDL+M S+PLKL 
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKL-

Query:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL
        NQAGD+  W  N RE E      AGDP A EG   LD L TS G             +G SW  FYGL
Subjt:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL

XP_008445935.1 PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo]1.9e-4664.88Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSP-SSNSAVLGSDLEMFSTPLKL
        MDSQ+   + + +CPRC+SLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVP+GGGSR+SKKNSK K A   DS  +SNS V+GSDL+M S+PLKL
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSP-SSNSAVLGSDLEMFSTPLKL

Query:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL
        NQ+GD   W  N RE E      AGDP A EGFG LDHLATS G              G SW KFYGL
Subjt:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL

XP_022924220.1 dof zinc finger protein 4-like [Cucurbita moschata]6.6e-3967.48Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP-----AIVRDSPSSNSAVLGSDLEMFST
        MD Q+I+SK   KCPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVP+GGG+R++K + K KP      IVRDSPSS S    SDLE+  +
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP-----AIVRDSPSSNSAVLGSDLEMFST

Query:  PLKLNQAGDWCGWIENRRELESG
        PL+LNQAGDW GWIE  RE E G
Subjt:  PLKLNQAGDWCGWIENRRELESG

XP_023520188.1 dof zinc finger protein DOF3.1-like [Cucurbita pepo subsp. pepo]1.2e-3754.65Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP---AIVRDSPSSNSAVLGSDLEMFSTPL
        MD Q+I+SK   KCPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVP+GGG+R++K +SK KP    IVRDSPSS S    SDLE+  +PL
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP---AIVRDSPSSNSAVLGSDLEMFSTPL

Query:  KLNQAGDWCGWIENRRELESGIVAAAGDPTA------EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKF
        KLNQ                      GDP A      EGFG LDHL TS  +E + EI+GGVA+    +  +
Subjt:  KLNQAGDWCGWIENRRELESGIVAAAGDPTA------EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKF

TrEMBL top hitse value%identityAlignment
A0A0A0LTJ9 Dof-type domain-containing protein1.4e-3957.74Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKL-
        MD Q+  ++ + +CPRC+SLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRN+P+GGG+R+SKKNSK+K A   DS  +++    SDL+M S+PLKL 
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKL-

Query:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL
        NQAGD+  W  N RE E      AGDP A EG   LD L TS G             +G SW  FYGL
Subjt:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL

A0A1S3BDV3 dof zinc finger protein DOF3.4-like9.2e-4764.88Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSP-SSNSAVLGSDLEMFSTPLKL
        MDSQ+   + + +CPRC+SLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVP+GGGSR+SKKNSK K A   DS  +SNS V+GSDL+M S+PLKL
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSP-SSNSAVLGSDLEMFSTPLKL

Query:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL
        NQ+GD   W  N RE E      AGDP A EGFG LDHLATS G              G SW KFYGL
Subjt:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL

A0A5D3BGN5 Dof zinc finger protein DOF3.4-like9.2e-4764.88Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSP-SSNSAVLGSDLEMFSTPLKL
        MDSQ+   + + +CPRC+SLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVP+GGGSR+SKKNSK K A   DS  +SNS V+GSDL+M S+PLKL
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSP-SSNSAVLGSDLEMFSTPLKL

Query:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL
        NQ+GD   W  N RE E      AGDP A EGFG LDHLATS G              G SW KFYGL
Subjt:  NQAGDWCGWIENRRELESGIVAAAGDPTA-EGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGL

A0A6J1C7U6 dof zinc finger protein DOF5.8-like4.9e-3250.29Show/hide
Query:  CPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNS-KSKPAIVRDSPSSNSAVLG-------SDLEMFSTPLKLNQ--AG
        CPRCHSL TKFCYYNNYNYSQPRH CKTCRRYWT+GG LRN+P+GG +R+S  +  K KPA +  S +S +   G       SDL   +TP KL++  A 
Subjt:  CPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNS-KSKPAIVRDSPSSNSAVLG-------SDLEMFSTPLKLNQ--AG

Query:  DWCGWIENRRELESGIVAAAGDPTA-------EGFGWLDHLATSGG----SEGVVEI-SGGVAVDGGSWFKFYGL
        D+ GWI+++     GI     DPTA       EGFG LD   +SGG    +EG++EI SG + +D  SWF+  GL
Subjt:  DWCGWIENRRELESGIVAAAGDPTA-------EGFGWLDHLATSGG----SEGVVEI-SGGVAVDGGSWFKFYGL

A0A6J1EE71 dof zinc finger protein 4-like3.2e-3967.48Show/hide
Query:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP-----AIVRDSPSSNSAVLGSDLEMFST
        MD Q+I+SK   KCPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVP+GGG+R++K + K KP      IVRDSPSS S    SDLE+  +
Subjt:  MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKP-----AIVRDSPSSNSAVLGSDLEMFST

Query:  PLKLNQAGDWCGWIENRRELESG
        PL+LNQAGDW GWIE  RE E G
Subjt:  PLKLNQAGDWCGWIENRRELESG

SwissProt top hitse value%identityAlignment
B9F1L8 Dof zinc finger protein 22.4e-2360.98Show/hide
Query:  QSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGS
        Q +  L CPRC+S +TKFCYYNNY+  QPR+FCKTCRRYWT GG LRNVP+GGGSR++K++S S       S S+++AV GS
Subjt:  QSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGS

O82155 Dof zinc finger protein DOF1.71.4e-2367.65Show/hide
Query:  IQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPA
        +  + +LKCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GG LRN+P+GGG+R+S K S S P+
Subjt:  IQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPA

Q6Z345 Dof zinc finger protein 46.9e-2362.03Show/hide
Query:  IQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSA
        I S   +KCPRC S +TKFCYYNNYN SQPRHFCK+CRRYWT GG+LRNVP+GGG R++K++  S  A    +PS+ +A
Subjt:  IQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSA

Q8LDR0 Dof zinc finger protein DOF5.42.4e-2371.23Show/hide
Query:  LKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSA
        LKCPRC+SL+TKFCYYNNYN SQPRHFCK CRRYWT GG+LRNVP+GGG R++K+ SK+K       PSS+SA
Subjt:  LKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSA

Q9M2U1 Dof zinc finger protein DOF3.65.3e-2352.08Show/hide
Query:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG
        ++ L CPRC S +TKFCY+NNY+ +QPRHFCKTCRRYWT GG LRNVP+GGG RR+K++ S+SK  +V  + ++ S    +    +S P K +  G
Subjt:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG

Arabidopsis top hitse value%identityAlignment
AT1G51700.1 DOF zinc finger protein 19.8e-2567.65Show/hide
Query:  IQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPA
        +  + +LKCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GG LRN+P+GGG+R+S K S S P+
Subjt:  IQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPA

AT3G55370.1 OBF-binding protein 33.7e-2452.08Show/hide
Query:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG
        ++ L CPRC S +TKFCY+NNY+ +QPRHFCKTCRRYWT GG LRNVP+GGG RR+K++ S+SK  +V  + ++ S    +    +S P K +  G
Subjt:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG

AT3G55370.2 OBF-binding protein 33.7e-2452.08Show/hide
Query:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG
        ++ L CPRC S +TKFCY+NNY+ +QPRHFCKTCRRYWT GG LRNVP+GGG RR+K++ S+SK  +V  + ++ S    +    +S P K +  G
Subjt:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG

AT3G55370.3 OBF-binding protein 33.7e-2452.08Show/hide
Query:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG
        ++ L CPRC S +TKFCY+NNY+ +QPRHFCKTCRRYWT GG LRNVP+GGG RR+K++ S+SK  +V  + ++ S    +    +S P K +  G
Subjt:  KSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKN-SKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAG

AT5G60850.1 OBF binding protein 41.7e-2471.23Show/hide
Query:  LKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSA
        LKCPRC+SL+TKFCYYNNYN SQPRHFCK CRRYWT GG+LRNVP+GGG R++K+ SK+K       PSS+SA
Subjt:  LKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCCAAAACATTCAATCCAAATCCGAATTGAAGTGCCCTAGATGCCATTCTCTCCACACCAAATTCTGCTATTACAATAATTACAATTACTCTCAGCCTCGCCA
CTTCTGCAAGACCTGCCGCCGCTACTGGACCCTCGGGGGCCTCCTCCGCAACGTTCCCATCGGCGGCGGAAGTCGCAGATCCAAGAAGAATTCCAAATCCAAGCCTGCAA
TTGTCAGAGATTCGCCGTCTTCGAACTCCGCTGTTCTTGGCTCTGATTTAGAAATGTTTTCGACTCCGTTGAAGTTGAATCAGGCGGGTGATTGGTGCGGTTGGATTGAG
AATCGAAGGGAATTGGAAAGTGGGATTGTGGCTGCGGCAGGGGATCCGACGGCGGAGGGATTTGGATGGTTGGATCATTTGGCGACAAGTGGTGGAAGTGAAGGAGTGGT
TGAGATTTCCGGTGGCGTCGCCGTCGATGGAGGCTCCTGGTTCAAATTCTACGGATTAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCCAAAACATTCAATCCAAATCCGAATTGAAGTGCCCTAGATGCCATTCTCTCCACACCAAATTCTGCTATTACAATAATTACAATTACTCTCAGCCTCGCCA
CTTCTGCAAGACCTGCCGCCGCTACTGGACCCTCGGGGGCCTCCTCCGCAACGTTCCCATCGGCGGCGGAAGTCGCAGATCCAAGAAGAATTCCAAATCCAAGCCTGCAA
TTGTCAGAGATTCGCCGTCTTCGAACTCCGCTGTTCTTGGCTCTGATTTAGAAATGTTTTCGACTCCGTTGAAGTTGAATCAGGCGGGTGATTGGTGCGGTTGGATTGAG
AATCGAAGGGAATTGGAAAGTGGGATTGTGGCTGCGGCAGGGGATCCGACGGCGGAGGGATTTGGATGGTTGGATCATTTGGCGACAAGTGGTGGAAGTGAAGGAGTGGT
TGAGATTTCCGGTGGCGTCGCCGTCGATGGAGGCTCCTGGTTCAAATTCTACGGATTAGATTAA
Protein sequenceShow/hide protein sequence
MDSQNIQSKSELKCPRCHSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPIGGGSRRSKKNSKSKPAIVRDSPSSNSAVLGSDLEMFSTPLKLNQAGDWCGWIE
NRRELESGIVAAAGDPTAEGFGWLDHLATSGGSEGVVEISGGVAVDGGSWFKFYGLD