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Lsi02G001480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G001480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationchr02:1222829..1224894
RNA-Seq ExpressionLsi02G001480
SyntenyLsi02G001480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]7.3e-1247.19Show/hide
Query:  AAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY
        AAE+V +W+ +++ FCV SAI IATVS+ I+T L   F  LS+ ++ CFV +  A++IN   + +S+ILYC GG  + ++ FIA AIPY
Subjt:  AAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY

KAF3947053.1 hypothetical protein CMV_026760 [Castanea mollissima]1.9e-0744.58Show/hide
Query:  QWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY
        +W +L VTFC+ SAI IA VS+Q+ ++LS  FH LS+ ++  F     +K I  K    +Q+L  FG F+ +TAFF+AI IP+
Subjt:  QWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY

KAF3947054.1 hypothetical protein CMV_026761 [Castanea mollissima]2.4e-0738.68Show/hide
Query:  EPLGSWPRTAA--------EIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFI
        +P G+ P  AA        +I M W ++M+ FC+ SAI IA VS+Q++ +LS  FH LS+ ++  F     ++ I  K    +Q+L   G F+ VTAFF+
Subjt:  EPLGSWPRTAA--------EIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFI

Query:  AIAIPY
        AI IP+
Subjt:  AIAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1557.3Show/hide
Query:  AAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY
        AAE+V +W+ ++V FCV SAIAIATVS+QIE +L  +F+FLS+ L+ CF F+A  K+     +RVS+ILYC GG   VTA FIA AIPY
Subjt:  AAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2370.21Show/hide
Query:  PRTAAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYTF
        P +A E++MQWE +MVTFC+G+AIAIATVS+QI+T+LS MF FLS  LMGCF F  SAK+I  K QRVS ILY  GGF FVTAFFIAIAIPY F
Subjt:  PRTAAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYTF

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein3.9e-1146.59Show/hide
Query:  AEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY
        AE+V + +++++ FC+ SAI IATVS+Q +T+L   F FLS+ ++ CF+ +  A++I+   + +S+ILYCFGGF   T  FIA AIPY
Subjt:  AEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY

A0A0A0LQB6 Uncharacterized protein1.1e-1354.44Show/hide
Query:  AEIVMQWEKLMVTFCVGSAIAIATVSLQIET--RLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY
        AE+V +W++++V  CV SAI IATVS+QIET  +L   F FLS+V++ CF F+  AK+     + VS+ILYC GGF  VTAFFIA AIP+
Subjt:  AEIVMQWEKLMVTFCVGSAIAIATVSLQIET--RLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY

A0A0A0LSX4 Uncharacterized protein3.6e-1247.19Show/hide
Query:  AAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY
        AAE+V +W+ +++ FCV SAI IATVS+ I+T L   F  LS+ ++ CFV +  A++IN   + +S+ILYC GG  + ++ FIA AIPY
Subjt:  AAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPY

A0A7N2M5A3 Uncharacterized protein2.4e-0840.57Show/hide
Query:  EPLGSWPRTAAEIV--------MQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFI
        +P G+ P  AA +V        M W ++M+ FC+ SAI IA VS+Q+  +LS  FH LS+  +  F     ++ I  K    +Q+L   G F+ VTAFFI
Subjt:  EPLGSWPRTAAEIV--------MQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFI

Query:  AIAIPY
        AIAIP+
Subjt:  AIAIPY

A0A7N2R866 Uncharacterized protein3.3e-1043.02Show/hide
Query:  MQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYTF
        M+W ++++ FC+ SA+ IA +S+Q+ T+L  +FH  S+ ++  F  +  +K IN K  R +Q+L  FG F+ VTAFFIAI IP+ F
Subjt:  MQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAAAATGCAATGGAGCAGGCCAAATTGGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCA
CGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTC
TTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGG
GTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAAAATGCAATGGAGCAGGCCAAATTGGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCA
CGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTC
TTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGG
GTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT
Protein sequenceShow/hide protein sequence
MDKKCNGAGQIGLITNFFNTSILFQSQSNDLETEPRHEPLGSWPRTAAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQR
VSQILYCFGGFWFVTAFFIAIAIPYTF