; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G001630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G001630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription initiation factor TFIID subunit 2
Genome locationchr02:1344792..1347830
RNA-Seq ExpressionLsi02G001630
SyntenyLsi02G001630
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domainsIPR037813 - Transcription initiation factor TFIID subunit 2
IPR042097 - Aminopeptidase N-like , N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019959.1 Transcription initiation factor TFIID subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-11995.54Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVESEKSFKAVSSPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIYLSSIEKEL+PNLLINCCKAFK+GSE+QDQPFLENGVQPA EDKQNIRLVRIDYWVEKS+VGIHF + +AHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

TYJ98978.1 transcription initiation factor TFIID subunit 2 [Cucumis melo var. makuwa]7.9e-12092.27Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDID RRVYGFTELEIAVPDIGIVGLHAENLGI+SVSVDGDPTEFEYYPRPQHVESE+SFKAV+SPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ---------NIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFP
        ADAAGSIY+SSIEKEL+PNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ         N+RLVRIDYWVEKSEVGIHFYN +AHTDNQIRRARCWFP
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ---------NIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFP

Query:  CMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQV
        CMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQV
Subjt:  CMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQV

XP_004137463.1 transcription initiation factor TFIID subunit 2 [Cucumis sativus]3.8e-12296.88Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDID RRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVE+E+SFKAVSSPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIYLSSIEKEL+PNLLINCCKAFKSGSEQQDQPFLENGVQ ADEDKQN+RLVRIDYWVEKSEVGIHFYN MAHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

XP_008456406.1 PREDICTED: transcription initiation factor TFIID subunit 2 [Cucumis melo]3.8e-12295.98Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDID RRVYGFTELEIAVPDIGIVGLHAENLGI+SVSVDGDPTEFEYYPRPQHVESE+SFKAV+SPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIY+SSIEKEL+PNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQN+RLVRIDYWVEKSEVGIHFYN +AHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

XP_038894650.1 transcription initiation factor TFIID subunit 2 isoform X1 [Benincasa hispida]5.0e-12296.43Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSP+SA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        AD A SIY+SSIEKEL+PNLLINCCKAFKSGSEQ DQPFLENGVQPADEDKQN+RLVRIDYWVEKSEVGIHFYN MAHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

TrEMBL top hitse value%identityAlignment
A0A0A0LQC8 Transcription initiation factor TFIID subunit 21.8e-12296.88Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDID RRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVE+E+SFKAVSSPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIYLSSIEKEL+PNLLINCCKAFKSGSEQQDQPFLENGVQ ADEDKQN+RLVRIDYWVEKSEVGIHFYN MAHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

A0A1S3C357 Transcription initiation factor TFIID subunit 21.8e-12295.98Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDID RRVYGFTELEIAVPDIGIVGLHAENLGI+SVSVDGDPTEFEYYPRPQHVESE+SFKAV+SPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIY+SSIEKEL+PNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQN+RLVRIDYWVEKSEVGIHFYN +AHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

A0A5D3BLC9 Transcription initiation factor TFIID subunit 23.8e-12092.27Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDID RRVYGFTELEIAVPDIGIVGLHAENLGI+SVSVDGDPTEFEYYPRPQHVESE+SFKAV+SPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ---------NIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFP
        ADAAGSIY+SSIEKEL+PNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ         N+RLVRIDYWVEKSEVGIHFYN +AHTDNQIRRARCWFP
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ---------NIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFP

Query:  CMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQV
        CMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQV
Subjt:  CMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQV

A0A6J1ED82 Transcription initiation factor TFIID subunit 21.5e-11995.54Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVESEKSFKAVSSPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIYLSSIEKEL+PNLLINCCKAFK+GSE+QDQPFLENGVQPA EDKQNIRLVRIDYWVEKS+VGIHF + +AHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

A0A6J1KGW7 Transcription initiation factor TFIID subunit 27.2e-11994.64Show/hide
Query:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA
        MAKPRKPKNTDD+KPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVESEKS+KAVSSPSSA
Subjt:  MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSA

Query:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC
        ADAAGSIYLSSIEKEL+PNLLINCCKAFK+GSE+QDQPFLENGVQPA EDKQNIRLVRIDYWVEKS+VGIHF + +AHTDNQIRRARCWFPCMDDGLQRC
Subjt:  ADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRC

Query:  KYDLEFTVSQNLVAVSNGILLYQV
        KYDLEFTVSQNLVAVSNGILLYQV
Subjt:  KYDLEFTVSQNLVAVSNGILLYQV

SwissProt top hitse value%identityAlignment
Q24325 Transcription initiation factor TFIID subunit 27.2e-0727.68Show/hide
Query:  HQKLCLS-IDIDKRRVYGFTELEIAVP---DIGIVGLHAENLGIVSVSV-DGDPTEFEYYPRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPN
        HQ + L+ I  ++R + G  EL I VP   ++ ++ L+A+ L I SV + D    +F Y+   Q++   K  K     S A +     +L+         
Subjt:  HQKLCLS-IDIDKRRVYGFTELEIAVP---DIGIVGLHAENLGIVSVSV-DGDPTEFEYYPRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPN

Query:  LLINCCKAFKSGSEQQDQPFLENG-----VQPAD----EDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIR-------------RARCWFPCMDDGL
                    + Q   P + NG     V P      ++ Q +R +RI++ +E  + G+HF    A TD + +              +R WFPC+D   
Subjt:  LLINCCKAFKSGSEQQDQPFLENG-----VQPAD----EDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIR-------------RARCWFPCMDDGL

Query:  QRCKYDLEFTVSQNLVAVSNGILL
          C + LEFTV +N+ AVS G LL
Subjt:  QRCKYDLEFTVSQNLVAVSNGILL

Q32PW3 Transcription initiation factor TFIID subunit 22.3e-0526.32Show/hide
Query:  HQKLCL-SIDIDKRRVYGFTELEI--AVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRP----QHVESEKSFKAVSSPSSAADAAGSIYLSSIEKEL-
        HQ +C+ +++  ++ V G+ EL I   V ++  + L+++   I  V V+     F Y         H   +++    SS  +AA +A      + E  + 
Subjt:  HQKLCL-SIDIDKRRVYGFTELEI--AVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRP----QHVESEKSFKAVSSPSSAADAAGSIYLSSIEKEL-

Query:  IPNLLINCCKAFKSGSEQQ-DQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAV
        +P+ L      +K G E +  + ++E  +   D+ K  +  V  D     +E   H ++      NQ   +R WFPC+D   + C + LEFTV  ++VAV
Subjt:  IPNLLINCCKAFKSGSEQQ-DQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAV

Query:  SNGILLYQV
        S G L+  V
Subjt:  SNGILLYQV

Q6P1X5 Transcription initiation factor TFIID subunit 27.9e-0626.05Show/hide
Query:  HQKLCL-SIDIDKRRVYGFTELEI--AVPDIGIVGLHAENLGIVSVSVDGDPTEFEYY-PRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPNL
        HQ +C+ +I+  ++ V GF EL I   V ++  + L+++   I  V ++     F Y  P  +   SE   + ++  S+A  AA    +S+++ +     
Subjt:  HQKLCL-SIDIDKRRVYGFTELEI--AVPDIGIVGLHAENLGIVSVSVDGDPTEFEYY-PRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPNL

Query:  LINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFY-----NSMAHTDNQI------RRARCWFPCMDDGLQRCKYDLEFTVS
        L       K  SE                D+  +  + I++ +++ + G+HF       SMA     +         R WFPC+D   + C + LEFTV 
Subjt:  LINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFY-----NSMAHTDNQI------RRARCWFPCMDDGLQRCKYDLEFTVS

Query:  QNLVAVSNGILLYQV
          +VAVSNG L+  V
Subjt:  QNLVAVSNGILLYQV

Q8C176 Transcription initiation factor TFIID subunit 27.9e-0626.05Show/hide
Query:  HQKLCL-SIDIDKRRVYGFTELEI--AVPDIGIVGLHAENLGIVSVSVDGDPTEFEYY-PRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPNL
        HQ +C+ +I+  ++ V GF EL I   V ++  + L+++   I  V ++     F Y  P  +   SE   + ++  S+A  AA    +S+++ +     
Subjt:  HQKLCL-SIDIDKRRVYGFTELEI--AVPDIGIVGLHAENLGIVSVSVDGDPTEFEYY-PRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPNL

Query:  LINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFY-----NSMAHTDNQI------RRARCWFPCMDDGLQRCKYDLEFTVS
        L       K  SE                D+  +  + I++ +++ + G+HF       SMA     +         R WFPC+D   + C + LEFTV 
Subjt:  LINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFY-----NSMAHTDNQI------RRARCWFPCMDDGLQRCKYDLEFTVS

Query:  QNLVAVSNGILLYQV
          +VAVSNG L+  V
Subjt:  QNLVAVSNGILLYQV

Q8LPF0 Transcription initiation factor TFIID subunit 29.5e-7662.83Show/hide
Query:  MAKPRKPKNTD--DAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPS
        MAK RKPKN +   AK  +N+GA V HQKL LSID  KR++YG+TELE++VPDIGIVGLHAENLGI SV VDG+PT FEYYP  Q+ E+E ++ +VS P+
Subjt:  MAKPRKPKNTD--DAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPS

Query:  SAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQ
        SAADAA   Y+  +++E   NLLINCCK  K  SEQ D   LENG Q + E KQN++L+RI+YWVEK E GIHF  ++ HTDNQ+RRARCWFPC+DD   
Subjt:  SAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQ

Query:  RCKYDLEFTVSQNLVAVSNGILLYQV
        RC +DLEFTV  N VAVS G LLYQV
Subjt:  RCKYDLEFTVSQNLVAVSNGILLYQV

Arabidopsis top hitse value%identityAlignment
AT1G73960.1 TBP-associated factor 26.8e-7762.83Show/hide
Query:  MAKPRKPKNTD--DAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPS
        MAK RKPKN +   AK  +N+GA V HQKL LSID  KR++YG+TELE++VPDIGIVGLHAENLGI SV VDG+PT FEYYP  Q+ E+E ++ +VS P+
Subjt:  MAKPRKPKNTD--DAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPS

Query:  SAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQ
        SAADAA   Y+  +++E   NLLINCCK  K  SEQ D   LENG Q + E KQN++L+RI+YWVEK E GIHF  ++ HTDNQ+RRARCWFPC+DD   
Subjt:  SAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQ

Query:  RCKYDLEFTVSQNLVAVSNGILLYQV
        RC +DLEFTV  N VAVS G LLYQV
Subjt:  RCKYDLEFTVSQNLVAVSNGILLYQV

AT1G73960.2 TBP-associated factor 26.8e-7762.83Show/hide
Query:  MAKPRKPKNTD--DAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPS
        MAK RKPKN +   AK  +N+GA V HQKL LSID  KR++YG+TELE++VPDIGIVGLHAENLGI SV VDG+PT FEYYP  Q+ E+E ++ +VS P+
Subjt:  MAKPRKPKNTD--DAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPS

Query:  SAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQ
        SAADAA   Y+  +++E   NLLINCCK  K  SEQ D   LENG Q + E KQN++L+RI+YWVEK E GIHF  ++ HTDNQ+RRARCWFPC+DD   
Subjt:  SAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQNIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQ

Query:  RCKYDLEFTVSQNLVAVSNGILLYQV
        RC +DLEFTV  N VAVS G LLYQV
Subjt:  RCKYDLEFTVSQNLVAVSNGILLYQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGCTTCCAATCTACGGGGATCATTGGATTAGTCGATGATTGTACGGTTAGGATTACAAAGACCAGGACAACTAAAATAGGGCACATCGTTGGGAAGCGAAACCC
ATCCCTTATAAAAGAGCTGGTCGAAGTCGGGTATATAAATCCCTTGTCCATTTTCGGATTTGGATCGCTCCCCCGCCCGGGCTATGTGCTTGCTATGGCCAAGCCTCGCA
AGCCCAAGAACACCGACGACGCGAAGCCACCTGACAACTCCGGAGCTGTAGTTCGTCACCAGAAGCTTTGTCTTTCCATCGACATTGACAAGCGTCGCGTTTATGGGTTC
ACCGAGTTGGAAATCGCGGTCCCTGATATTGGCATAGTTGGGTTGCACGCGGAGAATCTTGGGATTGTGAGTGTTTCAGTGGATGGTGACCCTACTGAATTCGAGTATTA
TCCGCGGCCTCAACATGTGGAAAGTGAGAAGAGTTTTAAAGCAGTGTCGTCGCCGAGCTCTGCTGCAGATGCTGCGGGGTCAATTTATTTGTCTTCAATCGAGAAAGAAT
TGATCCCTAATTTGTTGATAAACTGCTGCAAGGCTTTCAAGAGCGGAAGTGAGCAGCAAGACCAGCCATTTCTGGAGAATGGAGTGCAACCTGCGGACGAGGACAAGCAG
AATATAAGGCTGGTTCGTATTGATTACTGGGTAGAGAAATCAGAGGTAGGTATTCACTTCTATAACAGTATGGCTCACACTGACAACCAAATAAGGCGTGCAAGGTGCTG
GTTCCCTTGTATGGATGATGGCCTACAACGATGCAAGTATGACCTTGAGTTTACTGTCTCTCAAAATCTTGTGGCTGTCAGTAATGGAATTCTGTTGTACCAGGTGAGAA
ATACTCTGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGCTTCCAATCTACGGGGATCATTGGATTAGTCGATGATTGTACGGTTAGGATTACAAAGACCAGGACAACTAAAATAGGGCACATCGTTGGGAAGCGAAACCC
ATCCCTTATAAAAGAGCTGGTCGAAGTCGGGTATATAAATCCCTTGTCCATTTTCGGATTTGGATCGCTCCCCCGCCCGGGCTATGTGCTTGCTATGGCCAAGCCTCGCA
AGCCCAAGAACACCGACGACGCGAAGCCACCTGACAACTCCGGAGCTGTAGTTCGTCACCAGAAGCTTTGTCTTTCCATCGACATTGACAAGCGTCGCGTTTATGGGTTC
ACCGAGTTGGAAATCGCGGTCCCTGATATTGGCATAGTTGGGTTGCACGCGGAGAATCTTGGGATTGTGAGTGTTTCAGTGGATGGTGACCCTACTGAATTCGAGTATTA
TCCGCGGCCTCAACATGTGGAAAGTGAGAAGAGTTTTAAAGCAGTGTCGTCGCCGAGCTCTGCTGCAGATGCTGCGGGGTCAATTTATTTGTCTTCAATCGAGAAAGAAT
TGATCCCTAATTTGTTGATAAACTGCTGCAAGGCTTTCAAGAGCGGAAGTGAGCAGCAAGACCAGCCATTTCTGGAGAATGGAGTGCAACCTGCGGACGAGGACAAGCAG
AATATAAGGCTGGTTCGTATTGATTACTGGGTAGAGAAATCAGAGGTAGGTATTCACTTCTATAACAGTATGGCTCACACTGACAACCAAATAAGGCGTGCAAGGTGCTG
GTTCCCTTGTATGGATGATGGCCTACAACGATGCAAGTATGACCTTGAGTTTACTGTCTCTCAAAATCTTGTGGCTGTCAGTAATGGAATTCTGTTGTACCAGGTGAGAA
ATACTCTGAAATGA
Protein sequenceShow/hide protein sequence
MSSFQSTGIIGLVDDCTVRITKTRTTKIGHIVGKRNPSLIKELVEVGYINPLSIFGFGSLPRPGYVLAMAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGF
TELEIAVPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELIPNLLINCCKAFKSGSEQQDQPFLENGVQPADEDKQ
NIRLVRIDYWVEKSEVGIHFYNSMAHTDNQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVRNTLK