; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G001790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G001790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B
Genome locationchr02:1530950..1533191
RNA-Seq ExpressionLsi02G001790
SyntenyLsi02G001790
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98989.1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10-B [Cucumis melo var. makuwa]2.6e-5173.79Show/hide
Query:  FDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGCSLFSSLILFNF
        FDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG SLFSS      
Subjt:  FDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGCSLFSSLILFNF

Query:  RAILAFFLQLFCLFGRKWRYFEVLKWSQPNWSELLGGTTCISALC
                              VLKWSQPN SE LGGTT  S +C
Subjt:  RAILAFFLQLFCLFGRKWRYFEVLKWSQPNWSELLGGTTCISALC

XP_022924082.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata]1.4e-4998.96Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]1.2e-4897.92Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]1.6e-4897.92Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]1.9e-4998.96Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

TrEMBL top hitse value%identityAlignment
A0A5D3BJ03 NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 10-B1.3e-5173.79Show/hide
Query:  FDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGCSLFSSLILFNF
        FDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG SLFSS      
Subjt:  FDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGCSLFSSLILFNF

Query:  RAILAFFLQLFCLFGRKWRYFEVLKWSQPNWSELLGGTTCISALC
                              VLKWSQPN SE LGGTT  S +C
Subjt:  RAILAFFLQLFCLFGRKWRYFEVLKWSQPNWSELLGGTTCISALC

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B7.0e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like5.9e-4997.92Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like7.7e-4997.92Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B7.0e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial3.2e-0741.82Show/hide
Query:  YKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL
        Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL ++YL
Subjt:  YKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.8e-4282.47Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A2.6e-4181.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS61.8e-4281.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.1 Complex I subunit NDUFS66.2e-4382.47Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.2 Complex I subunit NDUFS66.2e-4382.47Show/hide
Query:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTAGAGATGAGGGAACACATTGT
CAGAGAGAAGTGGATCGCTATCGAAAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTC
AACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGCCGCCACCCATCCCTTCATGGTTGTTCTCTCTTTTCATCTCTCATTCTGTTTAATTTCCGAGCA
ATTTTAGCATTTTTTTTGCAATTGTTTTGCCTTTTTGGTAGAAAATGGAGATATTTTGAGGTCCTAAAGTGGAGCCAGCCGAATTGGAGTGAATTGCTGGGTGGAACAAC
GTGTATATCAGCTCTATGCTTTATTTCGTGTACTGCTATGAGGAGACATGAAGTTAACATTAAGTGGAAGGTCGTTGAAGCTGAAGGTATCATTGAGGATGTTCTCATTC
TGTGGGATCCTCGCTTTAGTGAAACTAGATTCACGTGGAAGAAGTTGATTGTGAATGGGATTGCTACTTCCATAAAAGTTCTTTATAGACACGCATTGAGGGGATGGAAC
TCCAACGTGATTTCTAATCTTTGCACTAATGTAATGAACAACGATGTGATTTTAGTGACTTTGAGGATTGAGAGGATTAGTCTTAAGGACTTCATCTATTTGTTCGATGT
TGGAAAAAATGTTCAGCAAATAAGGTCTTCGTTTGCTTTGCTAAGTTGTTACAGCAATTCCCTTAGTGTTCAATACACTTATAGGCGCCAATCTTCTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTAGAGATGAGGGAACACATTGT
CAGAGAGAAGTGGATCGCTATCGAAAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTC
AACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGCCGCCACCCATCCCTTCATGGTTGTTCTCTCTTTTCATCTCTCATTCTGTTTAATTTCCGAGCA
ATTTTAGCATTTTTTTTGCAATTGTTTTGCCTTTTTGGTAGAAAATGGAGATATTTTGAGGTCCTAAAGTGGAGCCAGCCGAATTGGAGTGAATTGCTGGGTGGAACAAC
GTGTATATCAGCTCTATGCTTTATTTCGTGTACTGCTATGAGGAGACATGAAGTTAACATTAAGTGGAAGGTCGTTGAAGCTGAAGGTATCATTGAGGATGTTCTCATTC
TGTGGGATCCTCGCTTTAGTGAAACTAGATTCACGTGGAAGAAGTTGATTGTGAATGGGATTGCTACTTCCATAAAAGTTCTTTATAGACACGCATTGAGGGGATGGAAC
TCCAACGTGATTTCTAATCTTTGCACTAATGTAATGAACAACGATGTGATTTTAGTGACTTTGAGGATTGAGAGGATTAGTCTTAAGGACTTCATCTATTTGTTCGATGT
TGGAAAAAATGTTCAGCAAATAAGGTCTTCGTTTGCTTTGCTAAGTTGTTACAGCAATTCCCTTAGTGTTCAATACACTTATAGGCGCCAATCTTCTAGGTGA
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGCSLFSSLILFNFRA
ILAFFLQLFCLFGRKWRYFEVLKWSQPNWSELLGGTTCISALCFISCTAMRRHEVNIKWKVVEAEGIIEDVLILWDPRFSETRFTWKKLIVNGIATSIKVLYRHALRGWN
SNVISNLCTNVMNNDVILVTLRIERISLKDFIYLFDVGKNVQQIRSSFALLSCYSNSLSVQYTYRRQSSR