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Lsi02G002080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G002080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationchr02:1731472..1731744
RNA-Seq ExpressionLsi02G002080
SyntenyLsi02G002080
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019930.1 hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3690Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIA+SIL+MF+M E+S+AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTC TPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

TYJ99011.1 non-specific lipid-transfer protein 2 [Cucumis melo var. makuwa]2.5e-3792.22Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIALSI++MF+MVEISMAVTCSPVQLSSCVSAITSSVPPS LCCSKIKEQ+PCLCKYMQNPTLKKFVASPNA+KVA+TCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

XP_004137484.1 non-specific lipid-transfer protein 2 [Cucumis sativus]3.9e-3894.44Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIALSI++MF+ VEI+MAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

XP_022923700.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]2.5e-3791.11Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIA+SIL+MF+M E+S+AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

XP_023000838.1 probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]5.7e-3790Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIA++IL+MF+M E+S+AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

TrEMBL top hitse value%identityAlignment
A0A0A0LVT5 AAI domain-containing protein1.9e-3894.44Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIALSI++MF+ VEI+MAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

A0A5D3BJV8 Non-specific lipid-transfer protein 21.2e-3792.22Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIALSI++MF+MVEISMAVTCSPVQLSSCVSAITSSVPPS LCCSKIKEQ+PCLCKYMQNPTLKKFVASPNA+KVA+TCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

A0A6J1ECM2 non-specific lipid-transfer protein 2-like1.2e-3791.11Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIA+SIL+MF+M E+S+AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

A0A6J1KNT4 probable non-specific lipid-transfer protein AKCS92.7e-3790Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIA++IL+MF+M E+S+AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFPKC
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

B7FM99 Chitinase / Hevein / PR-4 / Wheatwin22.5e-3076.09Show/hide
Query:  MKASQIALS--ILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MKASQIA+   ++++ I V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQ+PCLC+YM+NP L+KFV +PNARKVANTCGTPFP+C
Subjt:  MKASQIALS--ILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 26.8e-0937.31Show/hide
Query:  TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        +C+  QL+ C  AI     P+  CCS ++ Q+ C C++ ++P   ++V SPNARK  ++CG   P C
Subjt:  TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

P82353 Non-specific lipid-transfer protein 22.1e-1857.35Show/hide
Query:  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        VTCSPVQLS C+  I S  P    CC K++EQ+PCLC Y++NP+L+++V SPNARK+A+ CG P P+C
Subjt:  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

P82901 Non-specific lipid-transfer protein 2P1.0e-0940.91Show/hide
Query:  CSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG   P C
Subjt:  CSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

P86809 Non-specific lipid-transfer protein 21.2e-1659.7Show/hide
Query:  TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        TCS VQLS C++AIT + PPS  CC+K+KEQKPCLC Y+++P LK +V SP ARK A++CG    KC
Subjt:  TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

Q43681 Probable non-specific lipid-transfer protein AKCS91.0e-1746.24Show/hide
Query:  MKASQIALSILMMFIMVE---ISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        MK S +   +++   +++   ++ AVTC+P +LSSCV AIT    PS  CCSK+K Q+PCLC Y++NP+LK++V SP A+KV + CG  +P C
Subjt:  MKASQIALSILMMFIMVE---ISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-2354.44Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        M  S +AL+  ++ + V ++  VTCSP+QL+SC +A+TSS PPS+ CC+K++EQ+PCLC YM+NPTL+++V+SPNARKV+N+C  P P C
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.7e-1543.53Show/hide
Query:  SILMMFIMVE---ISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        +IL++ I+ +   ++    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  K F+ SPNA+ +A  C  P+PKC
Subjt:  SILMMFIMVE---ISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.4e-2457.47Show/hide
Query:  SQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        S  AL+ +++ I+   + AVTCSP+QLS C +AITSS PPS LCC+K+KEQ+PCLC YM+NP+L++FV++PNARKV+ +C  P P+C
Subjt:  SQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.7e-1651.47Show/hide
Query:  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNARK    C   +P C
Subjt:  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.5e-1651.47Show/hide
Query:  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
        VTC  VQLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA+K   TCG P+P C
Subjt:  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCATCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCAGTGCAACTGAGTTCCTGTGTTAGTGCAAT
CACATCTTCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTC
CCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCATCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCAGTGCAACTGAGTTCCTGTGTTAGTGCAAT
CACATCTTCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTC
CCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG
Protein sequenceShow/hide protein sequence
MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC