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Lsi02G002490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G002490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:2118896..2119132
RNA-Seq ExpressionLsi02G002490
SyntenyLsi02G002490
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572977.1 NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1877.03Show/hide
Query:  WKQSNSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPIS
        WK +N ENRE  +MEKI   FPVHSQVRKIKEESETIIDW PGQPEIRP  AAFR     ISRSPLGISGRPIS
Subjt:  WKQSNSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPIS

KAG6584306.1 DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2079.45Show/hide
Query:  ENRERNS-MEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF----RQISRSPLGISGRPISVGES
        EN ++N+ MEKI  PFPVHSQVRKIKEESE IIDWRPGQPEI+PP AAF    RQISRSPLG+SGRPISVGES
Subjt:  ENRERNS-MEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF----RQISRSPLGISGRPISVGES

KAG7012158.1 hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2076.92Show/hide
Query:  WKQSNSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPISVGES
        WK +N ENRE  +MEKI   FPVHSQVRKIKEESETIIDW PGQPEIRP  AAFR     ISRSPLGISGRPISVG+S
Subjt:  WKQSNSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPISVGES

KGN64190.1 hypothetical protein Csa_013611, partial [Cucumis sativus]1.1e-2589.86Show/hide
Query:  SENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES
        S+ RE NSMEKIEAPFPVHSQVRKIKEES+T IDWRPGQPEIRPPTA+FRQISRSPLGISGRPISVG+S
Subjt:  SENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES

TYJ99047.1 hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]3.0e-2690Show/hide
Query:  NSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES
        +S+ RERNS EKIE PFPVHSQVRKIKEESETI+DWRPGQPEIRPPTAAFRQISRSPLGISGRPISVG+S
Subjt:  NSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES

TrEMBL top hitse value%identityAlignment
A0A0A0LQJ2 Uncharacterized protein5.5e-2689.86Show/hide
Query:  SENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES
        S+ RE NSMEKIEAPFPVHSQVRKIKEES+T IDWRPGQPEIRPPTA+FRQISRSPLGISGRPISVG+S
Subjt:  SENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES

A0A0B2SM01 Uncharacterized protein1.5e-1262.86Show/hide
Query:  ENRERNSMEKI-EAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF-RQISRSPLGISGRPISVGES
        EN + N  E+  +   P+HSQV KI++ESE I+DW PG+PEIRP      RQISRSPLGISGRPISVGES
Subjt:  ENRERNSMEKI-EAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF-RQISRSPLGISGRPISVGES

A0A498I238 Uncharacterized protein2.0e-1261.33Show/hide
Query:  ENRERNSMEKI-----EAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPT--AAFRQISRSPLGISGRPISVGES
        ENR  N+  K+     E  FPVHSQVRKIK+ES+  IDW PG+PE+R P      RQISRSPLGIS RPISVG+S
Subjt:  ENRERNSMEKI-----EAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPT--AAFRQISRSPLGISGRPISVGES

A0A5D3BIV4 Uncharacterized protein1.4e-2690Show/hide
Query:  NSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES
        +S+ RERNS EKIE PFPVHSQVRKIKEESETI+DWRPGQPEIRPPTAAFRQISRSPLGISGRPISVG+S
Subjt:  NSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES

A0A6A4PFG9 Uncharacterized protein1.2e-1278.85Show/hide
Query:  VHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES
        +HSQVRKIK+ESE I+DW PGQPEIRP    FR+ISRSPLGISGR ISVGES
Subjt:  VHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67920.1 unknown protein2.6e-0447.06Show/hide
Query:  ENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF--RQISRSPLGISGRPISVG
        EN+  N  E  + P  +HSQV KIK+E E I      QPE+R   +    RQ SRSPLG+  R ISVG
Subjt:  ENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF--RQISRSPLGISGRPISVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCCATTGGAAGCAGAGCAATTCCGAGAACAGAGAGAGGAATAGTATGGAGAAGATTGAAGCTCCGTTTCCTGTTCATAGCCAGGTGAGGAAGATCAAGGAGGA
ATCAGAGACGATCATCGATTGGCGACCTGGACAGCCAGAGATCAGACCGCCGACCGCCGCCTTTCGCCAGATCTCTCGCTCCCCGCTCGGAATCTCCGGCCGCCCGATTT
CAGTGGGGGAATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCCATTGGAAGCAGAGCAATTCCGAGAACAGAGAGAGGAATAGTATGGAGAAGATTGAAGCTCCGTTTCCTGTTCATAGCCAGGTGAGGAAGATCAAGGAGGA
ATCAGAGACGATCATCGATTGGCGACCTGGACAGCCAGAGATCAGACCGCCGACCGCCGCCTTTCGCCAGATCTCTCGCTCCCCGCTCGGAATCTCCGGCCGCCCGATTT
CAGTGGGGGAATCATAG
Protein sequenceShow/hide protein sequence
MEIHWKQSNSENRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGES