CuGenDBv2

Gene ID	Lsi02G002720
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	DNA-binding protein RHL1-like
Genome location	chr02:2302514..2313360
RNA-Seq Expression	Lsi02G002720
Synteny	Lsi02G002720
Gene Ontology terms	GO:0042023 - DNA endoreduplication (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR038859 - DNA-binding protein RHL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137530.1 DNA-binding protein RHL1 isoform X2 [Cucumis sativus]

6.4e-170

78.98

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARG SSSK+DEAKGEI+PEIA RKRLKKLAFSNHILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFPK+ T GQ  E+DFNGGAGVTSTSG AGVT +S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQ+K INPA ENS KGEHGDDLV LE +VTNSIKTTPVRHSERSA KVFNFAEASSEDESAGT ADLSEGEEKNI              TED+S ES
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
        IDEDAV+IK P LEGNQTSISK KKS +A G AQSDTRGLVQPTLLSLFKKVEEK                              D G K RR VRGQ  
Subjt:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK Q+KDTEYEVEDEIE+LSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

XP_008467323.1 PREDICTED: DNA-binding protein RHL1 isoform X2 [Cucumis melo]

2.5e-166

77.6

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSK+DEAKGEI+PEI  RKRLKKLAFSN+ILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFPKE T GQ  E+DFNGGAGVTST         S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQKK INPA ENS KGEHGDDLV LE +VTNS+KT PVRHSERSA KVFNFAEASSEDES GT  DLSEGEEKNI              TED+S ES
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIKP-VLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
        IDEDAVEIKP  LEGNQTSISK KK+S+A G AQSDTRGLVQPTLLSLFKKVEEK                              D G K RRAVRGQ  
Subjt:  IDEDAVEIKP-VLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK QRKDTEYEVEDEIEELSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

XP_023519239.1 DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]

5.4e-161

74.83

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKG +DPEIAARKRLKKLAF+N+ILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNVMCED FDNMIVFSDAWWIGTKDENPEE RLDFPKE T GQ  E+DFNGGAGV ST         S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQKK IN A ENSLK EHGDDLVDLEDN+TNS+KTTPVRHSERSAGKVFNFA+A S++ESAGTYAD SEGEEKNI              TE +S +S
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRG-LVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
         D+DAVE    LEGN+T ISK K  S+A G AQS  RG LVQPTL SLFKKVEEK                              D GLK RR V+GQDD
Subjt:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRG-LVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK++RKDTEYE ED+IEELSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

XP_031744387.1 DNA-binding protein RHL1 isoform X1 [Cucumis sativus]

4.6e-168

78.08

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARG SSSK+DEAKGEI+PEIA RKRLKKLAFSNHILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFPK+ T GQ  E+DFNGGAGVTSTSG AGVT +S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQ+K INPA ENS KGEHGDDLV LE +VTNSIKTTPVRHSERSA KVFNFAEASSEDESAGT ADLSEGEEKNI              TED+S ES
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
        IDEDAV+IK P LEGNQTSISK KKS +A G AQSDTRGLVQPTLLSLFKKVEEK                              D G K RR VRGQ  
Subjt:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEY-----EVEDEIEELSSSQEDTDEDWTS
        GGK Q+KDTEY     EVEDEIE+LSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEY-----EVEDEIEELSSSQEDTDEDWTS

XP_038893754.1 DNA-binding protein RHL1 isoform X1 [Benincasa hispida]

3.6e-173

79.68

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGEIDP IAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEA LDFP E TTGQ  E DFN         GGAGVTG S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQKK INPAVENSLKGEHGDDLVDL+DNVTNSIKTTPVRHSERSA KVFNFAE SSEDES  TYADLSEGEEKNI              TEDLS +S
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
        +DEDA EI+ P LEGNQTSIS  KKSS A G AQSDTRGLVQPTLLSLFKKVEEK                              D GL+ RRAVRGQDD
Subjt:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK+Q+KDTEYEV+D+IEELSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ6 Uncharacterized protein

3.1e-170

78.98

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARG SSSK+DEAKGEI+PEIA RKRLKKLAFSNHILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFPK+ T GQ  E+DFNGGAGVTSTSG AGVT +S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQ+K INPA ENS KGEHGDDLV LE +VTNSIKTTPVRHSERSA KVFNFAEASSEDESAGT ADLSEGEEKNI              TED+S ES
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
        IDEDAV+IK P LEGNQTSISK KKS +A G AQSDTRGLVQPTLLSLFKKVEEK                              D G K RR VRGQ  
Subjt:  IDEDAVEIK-PVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK Q+KDTEYEVEDEIE+LSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

A0A1S3CTA5 DNA-binding protein RHL1 isoform X2

1.2e-166

77.6

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSK+DEAKGEI+PEI  RKRLKKLAFSN+ILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFPKE T GQ  E+DFNGGAGVTST         S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQKK INPA ENS KGEHGDDLV LE +VTNS+KT PVRHSERSA KVFNFAEASSEDES GT  DLSEGEEKNI              TED+S ES
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIKP-VLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
        IDEDAVEIKP  LEGNQTSISK KK+S+A G AQSDTRGLVQPTLLSLFKKVEEK                              D G K RRAVRGQ  
Subjt:  IDEDAVEIKP-VLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK QRKDTEYEVEDEIEELSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

A0A6J1C822 DNA-binding protein RHL1

1.2e-153

72.12

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE+DPE A RKRLKKLAFSN++LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNV CEDYFD+M+VFSDAWWIGTKDENPEEARLD PKE TTG+  E+DFNGGAGVTST         S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        K +VQKK IN A E+S KGE GD L DLEDN+ NSI TTPVRHSERSAGKVF FAEASSEDES G+Y DLSEGEEKNI              TEDLS ++
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRGL-VQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
         DED +   P LEGNQ  ISK KK S+A G  +S+ RGL VQ TL SLFKKVEEK                              D G K RRAVRGQDD
Subjt:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRGL-VQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQ-EDTDEDWTS
        GGKV RKD EYEVED+IEELSSSQ EDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQ-EDTDEDWTS

A0A6J1E8G5 DNA-binding protein RHL1-like

4.9e-160

74.36

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGE++PEIAARKRLKKLAF+N+ILSETQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNVMCED FDNMIVFSDAWWIGTKDENPEE RLDFPKE T G+  E+DFNGGAGV ST         S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQKK IN A E SLKGEHGDDLVDLEDN+TNS+KTTPVRHSERSAGKVFNFA+A S++ESAGTYAD SEGEEKNI              TE +S +S
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRG-LVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
         D+DAVE    LEGN+T ISK K  S+A G AQS  RG LVQPTL SLFKKVEEK                              D GLK RR V+GQDD
Subjt:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRG-LVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK +RKDTEYE ED+IEELSSSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

A0A6J1KHM2 DNA-binding protein RHL1-like

3.0e-157

73.67

Show/hide

Query:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
        MARGSSSSKRDEAKGE+DPEIAARKRLKKLAF+N+ILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNVMCED FDNMIVFSDAWWIGTKDENPEE RLDFPKE T G+  E+DFNGGAGV ST         S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSS

Query:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES
        KQ+VQKK I+ A ENSLK EHGDDLVDLEDN+TNS+KTTPVRHSERS GKVFNFA+A S++ESAGT AD SEGEEKNI              TE +S +S
Subjt:  KQNVQKKRINPAVENSLKGEHGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNI--------------TEDLSAES

Query:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRG-LVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD
         D+DAVE    LEGN+T ISK K  S+A G AQS  RG LVQPTL SLFKKVEEK                              D GLK R  V+GQDD
Subjt:  IDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRG-LVQPTLLSLFKKVEEK------------------------------DGGLKTRRAVRGQDD

Query:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS
        GGK  RKDTEYE ED+IEEL SSQEDTDEDWTS
Subjt:  GGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

SwissProt top hits

e value

%identity

Alignment

O81242 DNA-binding protein RHL1

5.8e-81

51.27

Show/hide

Query:  SSSSKRDEAKG--EIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILY
        +SSSK+  +KG  + D E   RKRLK LA  N +LS++ AK  + L PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP+LY
Subjt:  SSSSKRDEAKG--EIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILY

Query:  LDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSSKQ
        L+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV+C+DYFDNMIVFS++WWIGTK+ENPEEARLDFPKE    ++ E DF GGAG     G A V   +  
Subjt:  LDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSSKQ

Query:  NVQKKRI---NPAVEN----SLKGEHGDDLVDLEDNV--TNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNITEDLSAESIDEDAVE
         +  +     +P V+N    S  GE  DD + +   V  T  ++ TPVR S+R++GK FNFAE SSE  S  +  + S+ +EK + E  S+    E++  
Subjt:  NVQKKRI---NPAVEN----SLKGEHGDDLVDLEDNV--TNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNITEDLSAESIDEDAVE

Query:  IKPVLEGNQTSISKGKKSSQATGIAQ---SDTRGLVQPTLLSLFKKVEEKDGG
             +GN  + S  K   +     +   S    LVQ TL +LFKK EEK  G
Subjt:  IKPVLEGNQTSISKGKKSSQATGIAQ---SDTRGLVQPTLLSLFKKVEEKDGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G48380.1 root hair initiation protein root hairless 1 (RHL1)

4.1e-82

51.27

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Query:  SSSSKRDEAKG--EIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILY
        +SSSK+  +KG  + D E   RKRLK LA  N +LS++ AK  + L PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP+LY
Subjt:  SSSSKRDEAKG--EIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILY

Query:  LDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSSKQ
        L+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV+C+DYFDNMIVFS++WWIGTK+ENPEEARLDFPKE    ++ E DF GGAG     G A V   +  
Subjt:  LDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSSKQ

Query:  NVQKKRI---NPAVEN----SLKGEHGDDLVDLEDNV--TNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNITEDLSAESIDEDAVE
         +  +     +P V+N    S  GE  DD + +   V  T  ++ TPVR S+R++GK FNFAE SSE  S  +  + S+ +EK + E  S+    E++  
Subjt:  NVQKKRI---NPAVEN----SLKGEHGDDLVDLEDNV--TNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNITEDLSAESIDEDAVE

Query:  IKPVLEGNQTSISKGKKSSQATGIAQ---SDTRGLVQPTLLSLFKKVEEKDGG
             +GN  + S  K   +     +   S    LVQ TL +LFKK EEK  G
Subjt:  IKPVLEGNQTSISKGKKSSQATGIAQ---SDTRGLVQPTLLSLFKKVEEKDGG

AT1G48380.2 root hair initiation protein root hairless 1 (RHL1)

3.0e-77

47.14

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Query:  SSSSKRDEAKG--EIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILY
        +SSSK+  +KG  + D E   RKRLK LA  N +LS++ AK  + L PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  L TKNP+LY
Subjt:  SSSSKRDEAKG--EIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILY

Query:  LDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKEST------------------------------
        L+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV+C+DYFDNMIVFS++WWIGTK+ENPEEARLDFPKE                                
Subjt:  LDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKEST------------------------------

Query:  -TGQHEEHDFNGGAGVTSTSGGAGVTGSSKQNVQKKRI---NPAVEN----SLKGEHGDDLVDLEDNV--TNSIKTTPVRHSERSAGKVFNFAEASSEDE
           ++ E DF GGAG     G A V   +   +  +     +P V+N    S  GE  DD + +   V  T  ++ TPVR S+R++GK FNFAE SSE  
Subjt:  -TGQHEEHDFNGGAGVTSTSGGAGVTGSSKQNVQKKRI---NPAVEN----SLKGEHGDDLVDLEDNV--TNSIKTTPVRHSERSAGKVFNFAEASSEDE

Query:  SAGTYADLSEGEEKNITEDLSAESIDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQ---SDTRGLVQPTLLSLFKKVEEKDGG
        S  +  + S+ +EK + E  S+    E++       +GN  + S  K   +     +   S    LVQ TL +LFKK EEK  G
Subjt:  SAGTYADLSEGEEKNITEDLSAESIDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQ---SDTRGLVQPTLLSLFKKVEEKDGG

Sequences

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CDS sequence

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ATGGCGCGAGGATCATCGTCTTCAAAGAGGGACGAAGCAAAAGGAGAAATCGATCCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTCTCCAATCACATACT
TTCAGAGACACAGGCAAAGCCTCAGGCGTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCGCAGCGAAAGAACAGGTTCCTCT
TCTCGTTTTCAGGCTTGCTCGCTCCCGTTAGTGGAGGCAAGATTGGCGAGCTCAAGGATTTGGGAACCAAGAATCCAATTCTCTATCTCGATTTTCCTCAGGGGCGTATG
AAGTTGTTTGGAACTATTATGTATCCGAAGAACAGATATTTGACTTTGCAGTTCTCTAGAGGCGGAAAGAATGTGATGTGTGAAGATTATTTTGATAATATGATTGTCTT
TTCTGATGCATGGTGGATTGGAACTAAAGATGAAAATCCAGAGGAGGCTCGTCTTGATTTTCCTAAAGAATCGACTACAGGACAACATGAAGAACATGACTTTAACGGTG
GTGCTGGTGTTACTAGTACGAGTGGTGGTGCTGGTGTTACTGGTTCGAGCAAGCAGAATGTTCAAAAGAAGAGAATCAATCCTGCTGTAGAAAATTCCCTTAAAGGAGAA
CATGGAGATGATTTAGTGGACCTCGAAGACAACGTGACAAATTCAATAAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAAGTATTCAATTTTGCAGAGGC
TTCTTCTGAGGACGAGTCTGCTGGCACCTACGCTGATTTGTCTGAAGGAGAAGAAAAGAATATTACAGAAGATCTATCTGCTGAGTCTATAGATGAAGATGCTGTGGAAA
TTAAACCTGTTCTTGAAGGAAATCAGACATCAATTTCTAAGGGAAAAAAAAGTTCTCAGGCTACGGGAATTGCTCAGAGTGATACTCGTGGACTTGTCCAGCCTACTCTA
CTTAGTTTGTTCAAGAAAGTGGAGGAGAAGGATGGAGGATTAAAGACGAGGAGGGCTGTCCGGGGACAAGATGATGGAGGAAAAGTCCAGAGGAAGGATACAGAATATGA
GGTTGAAGATGAGATTGAAGAGTTGTCGAGTTCTCAAGAGGACACTGATGAAGATTGGACGAGTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAAGAAAAGAAAAAGAAACAAAAGAAGAGGAAAGGAAACAAGAGGGAGGGATCCGACAGTAAACTGCAGTCCGCAGCTGACTCCCAGCATCAGAAATGGCGCGAGGA
TCATCGTCTTCAAAGAGGGACGAAGCAAAAGGAGAAATCGATCCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTCTCCAATCACATACTTTCAGAGACACA
GGCAAAGCCTCAGGCGTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCGCAGCGAAAGAACAGGTTCCTCTTCTCGTTTTCAG
GCTTGCTCGCTCCCGTTAGTGGAGGCAAGATTGGCGAGCTCAAGGATTTGGGAACCAAGAATCCAATTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAGTTGTTTGGA
ACTATTATGTATCCGAAGAACAGATATTTGACTTTGCAGTTCTCTAGAGGCGGAAAGAATGTGATGTGTGAAGATTATTTTGATAATATGATTGTCTTTTCTGATGCATG
GTGGATTGGAACTAAAGATGAAAATCCAGAGGAGGCTCGTCTTGATTTTCCTAAAGAATCGACTACAGGACAACATGAAGAACATGACTTTAACGGTGGTGCTGGTGTTA
CTAGTACGAGTGGTGGTGCTGGTGTTACTGGTTCGAGCAAGCAGAATGTTCAAAAGAAGAGAATCAATCCTGCTGTAGAAAATTCCCTTAAAGGAGAACATGGAGATGAT
TTAGTGGACCTCGAAGACAACGTGACAAATTCAATAAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCGGAAAAGTATTCAATTTTGCAGAGGCTTCTTCTGAGGA
CGAGTCTGCTGGCACCTACGCTGATTTGTCTGAAGGAGAAGAAAAGAATATTACAGAAGATCTATCTGCTGAGTCTATAGATGAAGATGCTGTGGAAATTAAACCTGTTC
TTGAAGGAAATCAGACATCAATTTCTAAGGGAAAAAAAAGTTCTCAGGCTACGGGAATTGCTCAGAGTGATACTCGTGGACTTGTCCAGCCTACTCTACTTAGTTTGTTC
AAGAAAGTGGAGGAGAAGGATGGAGGATTAAAGACGAGGAGGGCTGTCCGGGGACAAGATGATGGAGGAAAAGTCCAGAGGAAGGATACAGAATATGAGGTTGAAGATGA
GATTGAAGAGTTGTCGAGTTCTCAAGAGGACACTGATGAAGATTGGACGAGTTGAGGTTATTACATTCTAACAATGGTAAGCCACAGCAGCAGCTAGGATTGCATTGCAG
GGGCTACCCGCTATATTCAGAATGCTATGCTCTACCAGTTTCTTTGATGCTGCTGCTTAATTGAGATTAAAGAAATTTAACCATTAAATGATATTGAAGTTAAGCTTTTA
TCATAAAGTTGGGCAATGTAAAATTATGTTTTGATATCAGAGAGTTCTACTTCTTAGGGATCAGACCAGATTTGCAGCTTGAAGGTAAAAATTATTCACAAGATTTTAAG
CAGCTTATAAACTATGAAGTGTCCGTGCCTTTGGATAGTATGATCCAATTAGTTACTATTGTTTCTAGATAATCGGGTATGTAACTAATTTAAGTATAGTTCAATTGATT
AAGACATCATTAACTAAAAGATGACAGGTTCTAAATCTCA

Protein sequence

Show/hide protein sequence

MARGSSSSKRDEAKGEIDPEIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRM
KLFGTIMYPKNRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEARLDFPKESTTGQHEEHDFNGGAGVTSTSGGAGVTGSSKQNVQKKRINPAVENSLKGE
HGDDLVDLEDNVTNSIKTTPVRHSERSAGKVFNFAEASSEDESAGTYADLSEGEEKNITEDLSAESIDEDAVEIKPVLEGNQTSISKGKKSSQATGIAQSDTRGLVQPTL
LSLFKKVEEKDGGLKTRRAVRGQDDGGKVQRKDTEYEVEDEIEELSSSQEDTDEDWTS

Lsi02G002720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome