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Lsi02G002780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G002780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:2358614..2361082
RNA-Seq ExpressionLsi02G002780
SyntenyLsi02G002780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG1839199.1 unnamed protein product [Musa acuminata subsp. malaccensis]9.6e-0437.76Show/hide
Query:  IAQSQSPLSILEEDSNISAHHFTEIAYTRTEHQLII-LTVLLNFEPIIHRLHPWIS-SASADRHEPLSSRFVEFVQFPHRRCGADRTRLELHIQIRRN
        IA+ Q PL  L + +++ AHH  E A+ R   +LI+ L V L+ EP+ HR  P I   A+ D   P  S  V   Q PH R  AD    E ++++RR+
Subjt:  IAQSQSPLSILEEDSNISAHHFTEIAYTRTEHQLII-LTVLLNFEPIIHRLHPWIS-SASADRHEPLSSRFVEFVQFPHRRCGADRTRLELHIQIRRN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTACAATACTTATCTAGAGCTTCTGACTTCCAAAAATGGTTTATTTTTAGTAGCTAAAAAGGAATGGCGTATCGCTCAAAGCCAAAGCCCTCTTTCCATTCTTGA
AGAAGATTCCAATATCTCTGCACATCACTTTACAGAAATCGCATACACTCGGACAGAACACCAACTTATAATCCTTACCGTCCTTCTCAATTTTGAACCAATTATCCACC
GTCTCCACCCCTGGATTTCCTCTGCTTCCGCCGATCGTCACGAACCATTGTCCAGTCGATTCGTCGAATTTGTCCAATTTCCACACCGTCGATGTGGCGCAGATCGTACT
CGCCTCGAATTGCACATTCAAATCCGTCGAAACTCGAATCACTCCTTTTTTAGGGCCGCCGCCTCTGCCGCGGAAAACAGGGAGGATGTAATAGTTGACACCGGCTCGGA
GCTTATTGCCGTCGATATCGCGGACGGCCTCCGGCGAAGCTTCGGCTCTGGAGAAGCGAACCTCGGTAGAGGCAAGGAGAATGAAAAGAAAAGACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTACAATACTTATCTAGAGCTTCTGACTTCCAAAAATGGTTTATTTTTAGTAGCTAAAAAGGAATGGCGTATCGCTCAAAGCCAAAGCCCTCTTTCCATTCTTGA
AGAAGATTCCAATATCTCTGCACATCACTTTACAGAAATCGCATACACTCGGACAGAACACCAACTTATAATCCTTACCGTCCTTCTCAATTTTGAACCAATTATCCACC
GTCTCCACCCCTGGATTTCCTCTGCTTCCGCCGATCGTCACGAACCATTGTCCAGTCGATTCGTCGAATTTGTCCAATTTCCACACCGTCGATGTGGCGCAGATCGTACT
CGCCTCGAATTGCACATTCAAATCCGTCGAAACTCGAATCACTCCTTTTTTAGGGCCGCCGCCTCTGCCGCGGAAAACAGGGAGGATGTAATAGTTGACACCGGCTCGGA
GCTTATTGCCGTCGATATCGCGGACGGCCTCCGGCGAAGCTTCGGCTCTGGAGAAGCGAACCTCGGTAGAGGCAAGGAGAATGAAAAGAAAAGACAGTAA
Protein sequenceShow/hide protein sequence
MDYNTYLELLTSKNGLFLVAKKEWRIAQSQSPLSILEEDSNISAHHFTEIAYTRTEHQLIILTVLLNFEPIIHRLHPWISSASADRHEPLSSRFVEFVQFPHRRCGADRT
RLELHIQIRRNSNHSFFRAAASAAENREDVIVDTGSELIAVDIADGLRRSFGSGEANLGRGKENEKKRQ