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Lsi02G003240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBAH and coiled-coil domain-containing protein 1
Genome locationchr02:2786678..2796701
RNA-Seq ExpressionLsi02G003240
SyntenyLsi02G003240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TNN64849.1 BAH and coiled-coil domain-containing protein 1 [Liparis tanakae]6.2e-0428.57Show/hide
Query:  NSIGNLARLLSTLH-------HSKIGLQLQDCTGLVVLWTKEQKTRCRSKIGLQLQYCTGLAVLWTKEQKTRCRIGLQLEDKMGLAVLWTKEQKTRCRSK
        +S+G + R  +  H       + K G    +CTG  + WTK                CTG +  WTK+  T C +    ++  G +  WTK+  T C  K
Subjt:  NSIGNLARLLSTLH-------HSKIGLQLQDCTGLVVLWTKEQKTRCRSKIGLQLQYCTGLAVLWTKEQKTRCRIGLQLEDKMGLAVLWTKEQKTRCRSK

Query:  IGLQLQDCTGLADLWTKEQKTRCRSK
              +CTG +  WTK+  T C  K
Subjt:  IGLQLQDCTGLADLWTKEQKTRCRSK
XP_022146496.1 auxilin-related protein 2 isoform X4 [Momordica charantia]6.2e-0448.61Show/hide
Query:  SETDLSTRQNNSNQFVETEGWSGSCEVYGEQILYLWLS---------LFRTFSIWNS--IGNLARLLSTLHH
        SETDLSTRQN+S QFVETEG SGSCE+ G Q+    ++         +     +W+S    N+  LLSTLHH
Subjt:  SETDLSTRQNNSNQFVETEGWSGSCEVYGEQILYLWLS---------LFRTFSIWNS--IGNLARLLSTLHH
TrEMBL top hitse value%identityAlignment
A0A4Z2HG55 BAH and coiled-coil domain-containing protein 13.0e-0428.57Show/hide
Query:  NSIGNLARLLSTLH-------HSKIGLQLQDCTGLVVLWTKEQKTRCRSKIGLQLQYCTGLAVLWTKEQKTRCRIGLQLEDKMGLAVLWTKEQKTRCRSK
        +S+G + R  +  H       + K G    +CTG  + WTK                CTG +  WTK+  T C +    ++  G +  WTK+  T C  K
Subjt:  NSIGNLARLLSTLH-------HSKIGLQLQDCTGLVVLWTKEQKTRCRSKIGLQLQYCTGLAVLWTKEQKTRCRIGLQLEDKMGLAVLWTKEQKTRCRSK

Query:  IGLQLQDCTGLADLWTKEQKTRCRSK
              +CTG +  WTK+  T C  K
Subjt:  IGLQLQDCTGLADLWTKEQKTRCRSK
A0A6J1CZJ0 auxilin-related protein 2 isoform X43.0e-0448.61Show/hide
Query:  SETDLSTRQNNSNQFVETEGWSGSCEVYGEQILYLWLS---------LFRTFSIWNS--IGNLARLLSTLHH
        SETDLSTRQN+S QFVETEG SGSCE+ G Q+    ++         +     +W+S    N+  LLSTLHH
Subjt:  SETDLSTRQNNSNQFVETEGWSGSCEVYGEQILYLWLS---------LFRTFSIWNS--IGNLARLLSTLHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTCGATTGTTCTTTTCTGGATATGAAATTTTAAAGGGTAGGACGACAGTTTTGACCACGAGCGATATGAGAGATATACTAGTGCCTGGATCAATTTCAGAGAC
TGATTTGAGCACAAGACAGAATAATAGCAATCAATTTGTTGAAACTGAAGGATGGTCCGGTTCATGTGAAGTTTATGGCGAACAAATTCTCTACCTTTGGCTTTCACTAT
TTCGTACGTTTTCAATATGGAATTCGATTGGTAATCTGGCAAGACTACTGTCAACACTCCATCATTCTAAGATTGGACTTCAACTTCAAGATTGTACCGGACTAGTCGTT
CTTTGGACGAAAGAGCAGAAAACTAGATGTCGATCTAAGATTGGACTTCAACTTCAATATTGTACCGGACTAGCCGTTCTTTGGACGAAAGAGCAGAAAACTAGATGTCG
AATTGGACTTCAACTTGAAGATAAGATGGGTCTAGCCGTTCTTTGGACGAAAGAGCAGAAAACTAGATGTCGATCTAAGATTGGACTTCAACTTCAAGATTGTACGGGTC
TAGCCGATCTTTGGACGAAAGAGCAGAAAACTAGATGTCGATCTAAGATTGGACATCAACTTCTAGATTGTACGGTCTGGCCGTTCTTTGGACGAAATAGTATAAAACTT
GATGGCGAGCTAAGAAAATGGACAAATAAAGACACTAGAATTTTGGACGATTTTTTAAGCTTTTCTTTGGATGAAGATGTAAATATTTGGCTGAGGATTGCAGAATATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTTCGATTGTTCTTTTCTGGATATGAAATTTTAAAGGGTAGGACGACAGTTTTGACCACGAGCGATATGAGAGATATACTAGTGCCTGGATCAATTTCAGAGAC
TGATTTGAGCACAAGACAGAATAATAGCAATCAATTTGTTGAAACTGAAGGATGGTCCGGTTCATGTGAAGTTTATGGCGAACAAATTCTCTACCTTTGGCTTTCACTAT
TTCGTACGTTTTCAATATGGAATTCGATTGGTAATCTGGCAAGACTACTGTCAACACTCCATCATTCTAAGATTGGACTTCAACTTCAAGATTGTACCGGACTAGTCGTT
CTTTGGACGAAAGAGCAGAAAACTAGATGTCGATCTAAGATTGGACTTCAACTTCAATATTGTACCGGACTAGCCGTTCTTTGGACGAAAGAGCAGAAAACTAGATGTCG
AATTGGACTTCAACTTGAAGATAAGATGGGTCTAGCCGTTCTTTGGACGAAAGAGCAGAAAACTAGATGTCGATCTAAGATTGGACTTCAACTTCAAGATTGTACGGGTC
TAGCCGATCTTTGGACGAAAGAGCAGAAAACTAGATGTCGATCTAAGATTGGACATCAACTTCTAGATTGTACGGTCTGGCCGTTCTTTGGACGAAATAGTATAAAACTT
GATGGCGAGCTAAGAAAATGGACAAATAAAGACACTAGAATTTTGGACGATTTTTTAAGCTTTTCTTTGGATGAAGATGTAAATATTTGGCTGAGGATTGCAGAATATTG
A
Protein sequenceShow/hide protein sequence
MGLRLFFSGYEILKGRTTVLTTSDMRDILVPGSISETDLSTRQNNSNQFVETEGWSGSCEVYGEQILYLWLSLFRTFSIWNSIGNLARLLSTLHHSKIGLQLQDCTGLVV
LWTKEQKTRCRSKIGLQLQYCTGLAVLWTKEQKTRCRIGLQLEDKMGLAVLWTKEQKTRCRSKIGLQLQDCTGLADLWTKEQKTRCRSKIGHQLLDCTVWPFFGRNSIKL
DGELRKWTNKDTRILDDFLSFSLDEDVNIWLRIAEY