; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G003330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G003330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:2846021..2854161
RNA-Seq ExpressionLsi02G003330
SyntenyLsi02G003330
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT76629.1 hypothetical protein VIGAN_01465800 [Vigna angularis var. angularis]1.5e-1063.41Show/hide
Query:  MKFNNPERVTLLLV---SSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        MKFN+PE VTLL +   S +SF   + +  S SS + S+FFFLCPVRS EQS+SSITIIDLLVVSI+S  + VLSFTAVSS+
Subjt:  MKFNNPERVTLLLV---SSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

KAF8006012.1 hypothetical protein BT93_K0331 [Corymbia citriodora subsp. variegata]1.5e-1569.32Show/hide
Query:  DHIPSMKFNNPERVTLLLVSS-SSFFEDSLVGFSL---SSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        DH PSMKF +PERVTLL+VSS  SF   SL+  S    S   FS FFFLCPVRS EQS+SSIT+IDLLVVSI S RS VLS TAVSSR
Subjt:  DHIPSMKFNNPERVTLLLVSS-SSFFEDSLVGFSL---SSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

KAF8066138.1 hypothetical protein N665_1159s0009 [Sinapis alba]6.2e-0958.54Show/hide
Query:  ADHIPSMKFNNPERVTLLLVSSSLLEDSLEGFSFSSSLDFSSFF--FLCPVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFT
        ADH PSM+FN+P+ VTLL  S+S        FSFS+S   SS F  FLCPV+S EQS+SSIT+IDL  VS  SF SS L FT
Subjt:  ADHIPSMKFNNPERVTLLLVSSSLLEDSLEGFSFSSSLDFSSFF--FLCPVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFT

PIN15784.1 hypothetical protein CDL12_11593 [Handroanthus impetiginosus]5.6e-1056.52Show/hide
Query:  ADHIPSMKFNNPERVTLLLVSS-------SLLEDSLEGFSFSSSLDFSSFFFLCPVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFTAVSSK
        AD  PSMKF +P+ VT L + S       SL       F  SSS   S FF LCPV+SSEQSMSSITI+DLL VSI +F +SVL FTAVSS+
Subjt:  ADHIPSMKFNNPERVTLLLVSS-------SLLEDSLEGFSFSSSLDFSSFFFLCPVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFTAVSSK

RHN49969.1 hypothetical protein MtrunA17_Chr6g0452381 [Medicago truncatula]4.2e-1365.52Show/hide
Query:  ADHIPSMKFNNPERVTLL--LVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD IPS+KFN PERVTLL    S S+FF  S    S S+  FS FFFLCPVRS EQSISSITIIDLL VSIKS+ + +LS T V+SR
Subjt:  ADHIPSMKFNNPERVTLL--LVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

TrEMBL top hitse value%identityAlignment
A0A0R0EH02 Uncharacterized protein5.1e-0956.82Show/hide
Query:  ADHIPSMKFNNPERVTL---LLVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD IPS+KFNN +RV L   LL SS  F  + L   S  S+  SS FFL PVRS EQS+SSIT IDLL VS  ++ S V  FT VSSR
Subjt:  ADHIPSMKFNNPERVTL---LLVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A0S3R7P0 Uncharacterized protein7.2e-1163.41Show/hide
Query:  MKFNNPERVTLLLV---SSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        MKFN+PE VTLL +   S +SF   + +  S SS + S+FFFLCPVRS EQS+SSITIIDLLVVSI+S  + VLSFTAVSS+
Subjt:  MKFNNPERVTLLLV---SSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A2G9HE43 Uncharacterized protein2.7e-1056.52Show/hide
Query:  ADHIPSMKFNNPERVTLLLVSS-------SLLEDSLEGFSFSSSLDFSSFFFLCPVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFTAVSSK
        AD  PSMKF +P+ VT L + S       SL       F  SSS   S FF LCPV+SSEQSMSSITI+DLL VSI +F +SVL FTAVSS+
Subjt:  ADHIPSMKFNNPERVTLLLVSS-------SLLEDSLEGFSFSSSLDFSSFFFLCPVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFTAVSSK

A0A396H9M1 Uncharacterized protein2.0e-1365.52Show/hide
Query:  ADHIPSMKFNNPERVTLL--LVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD IPS+KFN PERVTLL    S S+FF  S    S S+  FS FFFLCPVRS EQSISSITIIDLL VSIKS+ + +LS T V+SR
Subjt:  ADHIPSMKFNNPERVTLL--LVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

A0A445FB17 Uncharacterized protein (Fragment)5.1e-0956.82Show/hide
Query:  ADHIPSMKFNNPERVTL---LLVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR
        AD IPS+KFNN +RV L   LL SS  F  + L   S  S+  SS FFL PVRS EQS+SSIT IDLL VS  ++ S V  FT VSSR
Subjt:  ADHIPSMKFNNPERVTL---LLVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQSISSITIIDLLVVSIKSVRSCVLSFTAVSSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGATCGAGGACAGTGGGGATCAGGAAATTGAGTTAATCAGGCAACCCAATGTATTTGGAGATGGCTGCAAAGGAGACGAACAACCACTTGAACAATTGGCCAC
TGCAGGATCATCTTTTGGAGACTTGGGCATGAGGTTCTCTGCAACGTCTGCAGGGGCTGACCATATTCCATCAATGAAGTTCAACAATCCCGAGAGAGTGACTTTACTGC
TGGTCTCTTCATCTTCTTTCTTCGAGGATTCTTTGGTGGGTTTCTCTTTGTCATCTGTAGACTTTTCTTCTTTCTTCTTTCTCTGCCCTGTAAGATCAAGTGAGCAATCA
ATATCCTCAATCACAATTATTGATTTACTTGTCGTTTCAATCAAAAGCGTTCGAAGTTGTGTGTTGTCCTTCACTGCAGTGAGCTCCAGGGTGCTCAAATACTATGTGGC
TCCACACGGTGTGGCTGTAATACCATCTACCACCAGAACCATTGCTTTGAGTCGTGTAGCACTTCTGGATGAATTCTTGCTGAGATATGACTCAACCGCTATGAAAGCTT
CACTACGCATGAGGCGTTCGCCAACGTATTCATGGACTGAGATCTGGATGCAACGGGAGTGGCATTTGCGCACCCATGGTGGAGATGGAGAAGTGTGGGTGCACAAGGCC
TTTGAAAAAATGGTCATAGAGACGGAGTCGGTGGTGGCTGGTGGGTCTTTGAGACATTTCTCAAGGTCATCTTTTGGAGACTTGGGCATGAGGTTCTCTGCAACATCAGC
AGTGGATGAGTTTCAAGATTCAAGTAATTTTTCGCCAGCACTAAGAACGACTCAAAGCTGCAATAAGAAAGCTCAATATGCTGACCATATTCCATCAATGAAGTTCAACA
ATCCTGAGAGAGTAACTTTGCTGCTGGTCTCATCTTCTTTGTTGGAAGATTCCTTGGAGGGTTTTTCTTTCTCATCATCCTTGGACTTTTCTTCTTTCTTCTTCCTCTGC
CCTGTTAAATCAAGCGAGCAGTCGATGTCCTCAATCACTATTATCGATTTACTTGTAGTCTCAATCAAAAGCTTCCGAAGCTCTGTGTTGTTTTTCACTGCAGTGAGTTC
CAAGGTGCTCAAATACTATGTGGCTCCACATAGTGTGACTGTAACTCCATCTTCCACCAGAACCGTTGCCTTGAGTCTTTTGGCAGTGTTGGATGAATTCTTGCTGAGAT
ATGATTCAATAGCAATGAAAGCTTCACTACGCTTGAGGCGTTCACCAGCAAATTCATGGACTGAGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGATCGAGGACAGTGGGGATCAGGAAATTGAGTTAATCAGGCAACCCAATGTATTTGGAGATGGCTGCAAAGGAGACGAACAACCACTTGAACAATTGGCCAC
TGCAGGATCATCTTTTGGAGACTTGGGCATGAGGTTCTCTGCAACGTCTGCAGGGGCTGACCATATTCCATCAATGAAGTTCAACAATCCCGAGAGAGTGACTTTACTGC
TGGTCTCTTCATCTTCTTTCTTCGAGGATTCTTTGGTGGGTTTCTCTTTGTCATCTGTAGACTTTTCTTCTTTCTTCTTTCTCTGCCCTGTAAGATCAAGTGAGCAATCA
ATATCCTCAATCACAATTATTGATTTACTTGTCGTTTCAATCAAAAGCGTTCGAAGTTGTGTGTTGTCCTTCACTGCAGTGAGCTCCAGGGTGCTCAAATACTATGTGGC
TCCACACGGTGTGGCTGTAATACCATCTACCACCAGAACCATTGCTTTGAGTCGTGTAGCACTTCTGGATGAATTCTTGCTGAGATATGACTCAACCGCTATGAAAGCTT
CACTACGCATGAGGCGTTCGCCAACGTATTCATGGACTGAGATCTGGATGCAACGGGAGTGGCATTTGCGCACCCATGGTGGAGATGGAGAAGTGTGGGTGCACAAGGCC
TTTGAAAAAATGGTCATAGAGACGGAGTCGGTGGTGGCTGGTGGGTCTTTGAGACATTTCTCAAGGTCATCTTTTGGAGACTTGGGCATGAGGTTCTCTGCAACATCAGC
AGTGGATGAGTTTCAAGATTCAAGTAATTTTTCGCCAGCACTAAGAACGACTCAAAGCTGCAATAAGAAAGCTCAATATGCTGACCATATTCCATCAATGAAGTTCAACA
ATCCTGAGAGAGTAACTTTGCTGCTGGTCTCATCTTCTTTGTTGGAAGATTCCTTGGAGGGTTTTTCTTTCTCATCATCCTTGGACTTTTCTTCTTTCTTCTTCCTCTGC
CCTGTTAAATCAAGCGAGCAGTCGATGTCCTCAATCACTATTATCGATTTACTTGTAGTCTCAATCAAAAGCTTCCGAAGCTCTGTGTTGTTTTTCACTGCAGTGAGTTC
CAAGGTGCTCAAATACTATGTGGCTCCACATAGTGTGACTGTAACTCCATCTTCCACCAGAACCGTTGCCTTGAGTCTTTTGGCAGTGTTGGATGAATTCTTGCTGAGAT
ATGATTCAATAGCAATGAAAGCTTCACTACGCTTGAGGCGTTCACCAGCAAATTCATGGACTGAGATCTGA
Protein sequenceShow/hide protein sequence
MEMIEDSGDQEIELIRQPNVFGDGCKGDEQPLEQLATAGSSFGDLGMRFSATSAGADHIPSMKFNNPERVTLLLVSSSSFFEDSLVGFSLSSVDFSSFFFLCPVRSSEQS
ISSITIIDLLVVSIKSVRSCVLSFTAVSSRVLKYYVAPHGVAVIPSTTRTIALSRVALLDEFLLRYDSTAMKASLRMRRSPTYSWTEIWMQREWHLRTHGGDGEVWVHKA
FEKMVIETESVVAGGSLRHFSRSSFGDLGMRFSATSAVDEFQDSSNFSPALRTTQSCNKKAQYADHIPSMKFNNPERVTLLLVSSSLLEDSLEGFSFSSSLDFSSFFFLC
PVKSSEQSMSSITIIDLLVVSIKSFRSSVLFFTAVSSKVLKYYVAPHSVTVTPSSTRTVALSLLAVLDEFLLRYDSIAMKASLRLRRSPANSWTEI